RNA–Protein interactions for RNA: ENST00000462109.1

CYTIP-206, Transcript of cytohesin 1 interacting protein, humanhuman

TSL 2

Gene CYTIP, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIP-206ENST00000462109 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
CYTIP-206ENST00000462109 ABCC9O60706 1549 aa18.7■□□□□ 0.58
CYTIP-206ENST00000462109 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
CYTIP-206ENST00000462109 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
CYTIP-206ENST00000462109 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
CYTIP-206ENST00000462109 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.41
CYTIP-206ENST00000462109 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.4
CYTIP-206ENST00000462109 NACADO15069 1562 aa17.44■□□□□ 0.38
CYTIP-206ENST00000462109 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
CYTIP-206ENST00000462109 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
CYTIP-206ENST00000462109 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
CYTIP-206ENST00000462109 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
CYTIP-206ENST00000462109 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
CYTIP-206ENST00000462109 DCAF1Q9Y4B6 1507 aa16.93■□□□□ 0.3
CYTIP-206ENST00000462109 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
CYTIP-206ENST00000462109 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
CYTIP-206ENST00000462109 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
CYTIP-206ENST00000462109 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
CYTIP-206ENST00000462109 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
CYTIP-206ENST00000462109 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
CYTIP-206ENST00000462109 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
CYTIP-206ENST00000462109 NESP48681 1621 aa16.08■□□□□ 0.17
CYTIP-206ENST00000462109 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
CYTIP-206ENST00000462109 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
CYTIP-206ENST00000462109 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
CYTIP-206ENST00000462109 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
CYTIP-206ENST00000462109 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
CYTIP-206ENST00000462109 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
CYTIP-206ENST00000462109 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
CYTIP-206ENST00000462109 HMGXB3Q12766 1538 aa15.96■□□□□ 0.15
CYTIP-206ENST00000462109 CUX2O14529 1486 aa15.91■□□□□ 0.14
CYTIP-206ENST00000462109 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
CYTIP-206ENST00000462109 AEBP2Q6ZN18 517 aaPredicted RBP15.85■□□□□ 0.13
CYTIP-206ENST00000462109 WIZO95785 1651 aa15.82■□□□□ 0.12
CYTIP-206ENST00000462109 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
CYTIP-206ENST00000462109 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
CYTIP-206ENST00000462109 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
CYTIP-206ENST00000462109 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
CYTIP-206ENST00000462109 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
CYTIP-206ENST00000462109 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
CYTIP-206ENST00000462109 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
CYTIP-206ENST00000462109 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
CYTIP-206ENST00000462109 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
CYTIP-206ENST00000462109 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
CYTIP-206ENST00000462109 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
CYTIP-206ENST00000462109 CFTRP13569 1480 aa15.52■□□□□ 0.07
CYTIP-206ENST00000462109 WDR62O43379 1518 aa15.51■□□□□ 0.07
CYTIP-206ENST00000462109 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
CYTIP-206ENST00000462109 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
CYTIP-206ENST00000462109 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
CYTIP-206ENST00000462109 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
CYTIP-206ENST00000462109 TOPBP1Q92547 1522 aa15.26■□□□□ 0.03
CYTIP-206ENST00000462109 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
CYTIP-206ENST00000462109 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
CYTIP-206ENST00000462109 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
CYTIP-206ENST00000462109 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
CYTIP-206ENST00000462109 FBLN2P98095 1184 aa15.18■□□□□ 0.02
CYTIP-206ENST00000462109 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
CYTIP-206ENST00000462109 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
CYTIP-206ENST00000462109 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
CYTIP-206ENST00000462109 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
CYTIP-206ENST00000462109 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
CYTIP-206ENST00000462109 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
CYTIP-206ENST00000462109 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
CYTIP-206ENST00000462109 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
CYTIP-206ENST00000462109 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
CYTIP-206ENST00000462109 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
CYTIP-206ENST00000462109 SOGA1O94964 1423 aa15.09■□□□□ 0.01
CYTIP-206ENST00000462109 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
CYTIP-206ENST00000462109 ARHGEF11O15085 1522 aa15.03■□□□□ -0
CYTIP-206ENST00000462109 CUX1P39880 1505 aa15.02■□□□□ -0
CYTIP-206ENST00000462109 FGD5Q6ZNL6 1462 aa15.02■□□□□ -0
CYTIP-206ENST00000462109 CHD1O14646 1710 aa15□□□□□ -0.01
CYTIP-206ENST00000462109 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
CYTIP-206ENST00000462109 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
CYTIP-206ENST00000462109 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
CYTIP-206ENST00000462109 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
CYTIP-206ENST00000462109 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
CYTIP-206ENST00000462109 GAPVD1Q14C86 1478 aa14.85□□□□□ -0.03
CYTIP-206ENST00000462109 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
CYTIP-206ENST00000462109 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
CYTIP-206ENST00000462109 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
CYTIP-206ENST00000462109 WDR97A6NE52 1622 aa14.8□□□□□ -0.04
CYTIP-206ENST00000462109 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
CYTIP-206ENST00000462109 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
CYTIP-206ENST00000462109 PBRM1Q86U86 1689 aa14.77□□□□□ -0.05
CYTIP-206ENST00000462109 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
CYTIP-206ENST00000462109 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
CYTIP-206ENST00000462109 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
CYTIP-206ENST00000462109 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
CYTIP-206ENST00000462109 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
CYTIP-206ENST00000462109 CEP170Q5SW79 1584 aa14.67□□□□□ -0.06
CYTIP-206ENST00000462109 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
CYTIP-206ENST00000462109 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
CYTIP-206ENST00000462109 FHAD1B1AJZ9 1412 aa14.64□□□□□ -0.07
CYTIP-206ENST00000462109 NUP160Q12769 1436 aa14.62□□□□□ -0.07
CYTIP-206ENST00000462109 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
CYTIP-206ENST00000462109 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
CYTIP-206ENST00000462109 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
CYTIP-206ENST00000462109 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms