RNA–Protein interactions for RNA: ENST00000462108.5

CDHR4-204, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-204ENST00000462108 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
CDHR4-204ENST00000462108 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
CDHR4-204ENST00000462108 ABCC9O60706 1549 aa16.59■□□□□ 0.25
CDHR4-204ENST00000462108 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
CDHR4-204ENST00000462108 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
CDHR4-204ENST00000462108 NACADO15069 1562 aa15.96■□□□□ 0.14
CDHR4-204ENST00000462108 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
CDHR4-204ENST00000462108 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
CDHR4-204ENST00000462108 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
CDHR4-204ENST00000462108 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
CDHR4-204ENST00000462108 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
CDHR4-204ENST00000462108 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
CDHR4-204ENST00000462108 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDHR4-204ENST00000462108 SCRIBQ14160 1630 aa15.46■□□□□ 0.06
CDHR4-204ENST00000462108 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
CDHR4-204ENST00000462108 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
CDHR4-204ENST00000462108 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
CDHR4-204ENST00000462108 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
CDHR4-204ENST00000462108 CECR2Q9BXF3 1484 aa14.91□□□□□ -0.02
CDHR4-204ENST00000462108 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
CDHR4-204ENST00000462108 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
CDHR4-204ENST00000462108 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
CDHR4-204ENST00000462108 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
CDHR4-204ENST00000462108 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
CDHR4-204ENST00000462108 MROH2BQ7Z745 1585 aa14.67□□□□□ -0.06
CDHR4-204ENST00000462108 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
CDHR4-204ENST00000462108 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
CDHR4-204ENST00000462108 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
CDHR4-204ENST00000462108 WIZO95785 1651 aa14.53□□□□□ -0.08
CDHR4-204ENST00000462108 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
CDHR4-204ENST00000462108 CUX2O14529 1486 aa14.46□□□□□ -0.09
CDHR4-204ENST00000462108 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
CDHR4-204ENST00000462108 NESP48681 1621 aa14.35□□□□□ -0.11
CDHR4-204ENST00000462108 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
CDHR4-204ENST00000462108 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
CDHR4-204ENST00000462108 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
CDHR4-204ENST00000462108 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
CDHR4-204ENST00000462108 KIF21AQ7Z4S6 1674 aa14.24□□□□□ -0.13
CDHR4-204ENST00000462108 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
CDHR4-204ENST00000462108 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
CDHR4-204ENST00000462108 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
CDHR4-204ENST00000462108 CFTRP13569 1480 aa14.18□□□□□ -0.14
CDHR4-204ENST00000462108 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
CDHR4-204ENST00000462108 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
CDHR4-204ENST00000462108 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
CDHR4-204ENST00000462108 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
CDHR4-204ENST00000462108 WDR62O43379 1518 aa14.05□□□□□ -0.16
CDHR4-204ENST00000462108 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
CDHR4-204ENST00000462108 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
CDHR4-204ENST00000462108 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
CDHR4-204ENST00000462108 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
CDHR4-204ENST00000462108 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
CDHR4-204ENST00000462108 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
CDHR4-204ENST00000462108 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
CDHR4-204ENST00000462108 CUX1P39880 1505 aa13.77□□□□□ -0.21
CDHR4-204ENST00000462108 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
CDHR4-204ENST00000462108 POLA1P09884 1462 aaPredicted RBP13.75□□□□□ -0.21
CDHR4-204ENST00000462108 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
CDHR4-204ENST00000462108 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.21
CDHR4-204ENST00000462108 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.22
CDHR4-204ENST00000462108 SOGA1O94964 1423 aa13.69□□□□□ -0.22
CDHR4-204ENST00000462108 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
CDHR4-204ENST00000462108 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
CDHR4-204ENST00000462108 WDR97A6NE52 1622 aa13.66□□□□□ -0.22
CDHR4-204ENST00000462108 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
CDHR4-204ENST00000462108 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
CDHR4-204ENST00000462108 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
CDHR4-204ENST00000462108 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDHR4-204ENST00000462108 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
CDHR4-204ENST00000462108 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
CDHR4-204ENST00000462108 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
CDHR4-204ENST00000462108 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
CDHR4-204ENST00000462108 CHD1O14646 1710 aa13.57□□□□□ -0.24
CDHR4-204ENST00000462108 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
CDHR4-204ENST00000462108 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
CDHR4-204ENST00000462108 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
CDHR4-204ENST00000462108 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
CDHR4-204ENST00000462108 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
CDHR4-204ENST00000462108 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
CDHR4-204ENST00000462108 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
CDHR4-204ENST00000462108 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
CDHR4-204ENST00000462108 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.25
CDHR4-204ENST00000462108 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
CDHR4-204ENST00000462108 FBLN2P98095 1184 aa13.46□□□□□ -0.25
CDHR4-204ENST00000462108 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
CDHR4-204ENST00000462108 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
CDHR4-204ENST00000462108 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
CDHR4-204ENST00000462108 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
CDHR4-204ENST00000462108 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
CDHR4-204ENST00000462108 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
CDHR4-204ENST00000462108 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
CDHR4-204ENST00000462108 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
CDHR4-204ENST00000462108 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
CDHR4-204ENST00000462108 CUL7Q14999 1698 aa13.33□□□□□ -0.28
CDHR4-204ENST00000462108 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
CDHR4-204ENST00000462108 IGF1RP08069 1367 aa13.32□□□□□ -0.28
CDHR4-204ENST00000462108 NUP160Q12769 1436 aa13.3□□□□□ -0.28
CDHR4-204ENST00000462108 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
CDHR4-204ENST00000462108 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
CDHR4-204ENST00000462108 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms