RNA–Protein interactions for RNA: ENST00000462078.1

POLR1A-205, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 469 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-205ENST00000462078 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
POLR1A-205ENST00000462078 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
POLR1A-205ENST00000462078 ABCC9O60706 1549 aa21.04■□□□□ 0.96
POLR1A-205ENST00000462078 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
POLR1A-205ENST00000462078 NACADO15069 1562 aa20.17■□□□□ 0.82
POLR1A-205ENST00000462078 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
POLR1A-205ENST00000462078 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
POLR1A-205ENST00000462078 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
POLR1A-205ENST00000462078 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
POLR1A-205ENST00000462078 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
POLR1A-205ENST00000462078 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
POLR1A-205ENST00000462078 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
POLR1A-205ENST00000462078 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
POLR1A-205ENST00000462078 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
POLR1A-205ENST00000462078 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
POLR1A-205ENST00000462078 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
POLR1A-205ENST00000462078 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
POLR1A-205ENST00000462078 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
POLR1A-205ENST00000462078 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
POLR1A-205ENST00000462078 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
POLR1A-205ENST00000462078 NCAPD3P42695 1498 aa18.62■□□□□ 0.57
POLR1A-205ENST00000462078 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
POLR1A-205ENST00000462078 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
POLR1A-205ENST00000462078 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
POLR1A-205ENST00000462078 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
POLR1A-205ENST00000462078 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
POLR1A-205ENST00000462078 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
POLR1A-205ENST00000462078 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
POLR1A-205ENST00000462078 WIZO95785 1651 aa18.24■□□□□ 0.51
POLR1A-205ENST00000462078 NESP48681 1621 aa18.19■□□□□ 0.5
POLR1A-205ENST00000462078 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
POLR1A-205ENST00000462078 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
POLR1A-205ENST00000462078 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
POLR1A-205ENST00000462078 CUX2O14529 1486 aa18.1■□□□□ 0.49
POLR1A-205ENST00000462078 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
POLR1A-205ENST00000462078 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
POLR1A-205ENST00000462078 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
POLR1A-205ENST00000462078 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
POLR1A-205ENST00000462078 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
POLR1A-205ENST00000462078 CFTRP13569 1480 aa17.9■□□□□ 0.46
POLR1A-205ENST00000462078 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
POLR1A-205ENST00000462078 WDR62O43379 1518 aa17.81■□□□□ 0.44
POLR1A-205ENST00000462078 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
POLR1A-205ENST00000462078 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
POLR1A-205ENST00000462078 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
POLR1A-205ENST00000462078 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
POLR1A-205ENST00000462078 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
POLR1A-205ENST00000462078 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
POLR1A-205ENST00000462078 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
POLR1A-205ENST00000462078 TRIM41Q8WV44 630 aa17.5■□□□□ 0.39
POLR1A-205ENST00000462078 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
POLR1A-205ENST00000462078 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
POLR1A-205ENST00000462078 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
POLR1A-205ENST00000462078 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
POLR1A-205ENST00000462078 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
POLR1A-205ENST00000462078 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
POLR1A-205ENST00000462078 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
POLR1A-205ENST00000462078 CUX1P39880 1505 aa17.31■□□□□ 0.36
POLR1A-205ENST00000462078 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
POLR1A-205ENST00000462078 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
POLR1A-205ENST00000462078 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
POLR1A-205ENST00000462078 SOGA1O94964 1423 aa17.24■□□□□ 0.35
POLR1A-205ENST00000462078 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
POLR1A-205ENST00000462078 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.352e-8■■■■■ 37
POLR1A-205ENST00000462078 CHD1O14646 1710 aa17.16■□□□□ 0.34
POLR1A-205ENST00000462078 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
POLR1A-205ENST00000462078 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
POLR1A-205ENST00000462078 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
POLR1A-205ENST00000462078 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
POLR1A-205ENST00000462078 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
POLR1A-205ENST00000462078 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
POLR1A-205ENST00000462078 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
POLR1A-205ENST00000462078 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
POLR1A-205ENST00000462078 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
POLR1A-205ENST00000462078 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
POLR1A-205ENST00000462078 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
POLR1A-205ENST00000462078 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
POLR1A-205ENST00000462078 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
POLR1A-205ENST00000462078 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
POLR1A-205ENST00000462078 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
POLR1A-205ENST00000462078 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
POLR1A-205ENST00000462078 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
POLR1A-205ENST00000462078 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
POLR1A-205ENST00000462078 FBLN2P98095 1184 aa16.97■□□□□ 0.31
POLR1A-205ENST00000462078 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
POLR1A-205ENST00000462078 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
POLR1A-205ENST00000462078 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
POLR1A-205ENST00000462078 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
POLR1A-205ENST00000462078 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
POLR1A-205ENST00000462078 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
POLR1A-205ENST00000462078 NUP160Q12769 1436 aa16.83■□□□□ 0.28
POLR1A-205ENST00000462078 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
POLR1A-205ENST00000462078 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
POLR1A-205ENST00000462078 SHROOM2Q13796 1616 aa16.77■□□□□ 0.27
POLR1A-205ENST00000462078 IGF1RP08069 1367 aa16.74■□□□□ 0.27
POLR1A-205ENST00000462078 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
POLR1A-205ENST00000462078 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
POLR1A-205ENST00000462078 CUL7Q14999 1698 aa16.7■□□□□ 0.26
POLR1A-205ENST00000462078 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
POLR1A-205ENST00000462078 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms