RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 NISCHQ9Y2I1 1504 aa50.11■■■■■ 5.61
NR1H3-216ENST00000462051 ABCC9O60706 1549 aa45.35■■■■■ 4.85
NR1H3-216ENST00000462051 CCDC180Q9P1Z9 1646 aa45.01■■■■■ 4.8
NR1H3-216ENST00000462051 RB1CC1Q8TDY2 1594 aa43.02■■■■■ 4.48
NR1H3-216ENST00000462051 DNAJC5BQ9UF47 199 aa42.89■■■■■ 4.46
NR1H3-216ENST00000462051 NACADO15069 1562 aa42.67■■■■■ 4.42
NR1H3-216ENST00000462051 DCAF8L2P0C7V8 631 aa42.55■■■■■ 4.4
NR1H3-216ENST00000462051 PABPN1Q86U42 306 aaKnown RBP eCLIP42.26■■■■■ 4.36
NR1H3-216ENST00000462051 UNC13AQ9UPW8 1703 aa42.05■■■■■ 4.32
NR1H3-216ENST00000462051 MYO15BQ96JP2 1530 aa41.99■■■■■ 4.31
NR1H3-216ENST00000462051 BICRAQ9NZM4 1560 aa41.8■■■■■ 4.28
NR1H3-216ENST00000462051 ZCCHC6Q5VYS8 1495 aaKnown RBP41.43■■■■■ 4.22
NR1H3-216ENST00000462051 DCAF1Q9Y4B6 1507 aa41.35■■■■■ 4.21
NR1H3-216ENST00000462051 SHROOM4Q9ULL8 1493 aa41.14■■■■■ 4.18
NR1H3-216ENST00000462051 SCRIBQ14160 1630 aa41.02■■■■■ 4.16
NR1H3-216ENST00000462051 CC2D2AQ9P2K1 1620 aa40.94■■■■■ 4.14
NR1H3-216ENST00000462051 CECR2Q9BXF3 1484 aa40.87■■■■■ 4.13
NR1H3-216ENST00000462051 EIF4G1Q04637 1599 aaKnown RBP40.77■■■■■ 4.12
NR1H3-216ENST00000462051 DNAJC5Q9H3Z4 198 aa39.57■■■■□ 3.93
NR1H3-216ENST00000462051 NCAPD3P42695 1498 aa39.44■■■■□ 3.9
NR1H3-216ENST00000462051 ATAD2BQ9ULI0 1458 aa39.27■■■■□ 3.88
NR1H3-216ENST00000462051 CUX2O14529 1486 aa39.17■■■■□ 3.86
NR1H3-216ENST00000462051 ERCC6Q03468 1493 aa39.15■■■■□ 3.86
NR1H3-216ENST00000462051 SMARCA4P51532 1647 aa39.11■■■■□ 3.85
NR1H3-216ENST00000462051 SMARCA2P51531 1590 aa39.1■■■■□ 3.85
NR1H3-216ENST00000462051 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
NR1H3-216ENST00000462051 NESP48681 1621 aa38.89■■■■□ 3.82
NR1H3-216ENST00000462051 BAZ1AQ9NRL2 1556 aaPredicted RBP38.89■■■■□ 3.82
NR1H3-216ENST00000462051 BAZ1BQ9UIG0 1483 aaKnown RBP38.84■■■■□ 3.81
NR1H3-216ENST00000462051 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
NR1H3-216ENST00000462051 MROH2BQ7Z745 1585 aa38.62■■■■□ 3.77
NR1H3-216ENST00000462051 LAMC3Q9Y6N6 1575 aa38.54■■■■□ 3.76
NR1H3-216ENST00000462051 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
NR1H3-216ENST00000462051 PDS5BQ9NTI5 1447 aa38.37■■■■□ 3.73
NR1H3-216ENST00000462051 KIF21AQ7Z4S6 1674 aa38.33■■■■□ 3.73
NR1H3-216ENST00000462051 CADPSQ9ULU8 1353 aa38.24■■■■□ 3.71
NR1H3-216ENST00000462051 WIZO95785 1651 aa38.14■■■■□ 3.7
NR1H3-216ENST00000462051 MRC2Q9UBG0 1479 aa38.02■■■■□ 3.68
NR1H3-216ENST00000462051 WDR62O43379 1518 aa37.91■■■■□ 3.66
NR1H3-216ENST00000462051 CEP164Q9UPV0 1460 aa37.81■■■■□ 3.64
NR1H3-216ENST00000462051 FANCD2Q9BXW9 1451 aa37.77■■■■□ 3.64
NR1H3-216ENST00000462051 RSF1Q96T23 1441 aaPredicted RBP37.75■■■■□ 3.63
NR1H3-216ENST00000462051 CFTRP13569 1480 aa37.72■■■■□ 3.63
NR1H3-216ENST00000462051 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
NR1H3-216ENST00000462051 TOP2AP11388 1531 aaKnown RBP37.59■■■■□ 3.61
NR1H3-216ENST00000462051 URB2Q14146 1524 aaKnown RBP37.47■■■■□ 3.59
NR1H3-216ENST00000462051 OSCARQ8IYS5 282 aa37.46■■■■□ 3.59
NR1H3-216ENST00000462051 CCDC88BA6NC98 1476 aa37.25■■■■□ 3.55
NR1H3-216ENST00000462051 PRDM2Q13029 1718 aa37.24■■■■□ 3.55
NR1H3-216ENST00000462051 IFT140Q96RY7 1462 aa37.07■■■■□ 3.53
NR1H3-216ENST00000462051 ZNF608Q9ULD9 1512 aaPredicted RBP37.06■■■■□ 3.52
NR1H3-216ENST00000462051 TOPBP1Q92547 1522 aa37.02■■■■□ 3.52
NR1H3-216ENST00000462051 ABCC8Q09428 1581 aa36.94■■■■□ 3.5
NR1H3-216ENST00000462051 RIMBP3CA6NJZ7 1639 aa36.88■■■■□ 3.5
NR1H3-216ENST00000462051 RIMBP3BA6NNM3 1639 aa36.88■■■■□ 3.5
NR1H3-216ENST00000462051 RIMBP3Q9UFD9 1639 aa36.88■■■■□ 3.5
NR1H3-216ENST00000462051 DNMBPQ6XZF7 1577 aa36.83■■■■□ 3.49
NR1H3-216ENST00000462051 EIF4G3O43432 1585 aaKnown RBP36.78■■■■□ 3.48
NR1H3-216ENST00000462051 ARHGEF11O15085 1522 aa36.74■■■■□ 3.47
NR1H3-216ENST00000462051 AQRO60306 1485 aaKnown RBP eCLIP36.73■■■■□ 3.47
NR1H3-216ENST00000462051 TARBP1Q13395 1621 aaKnown RBP36.7■■■■□ 3.47
NR1H3-216ENST00000462051 POLA1P09884 1462 aaPredicted RBP36.62■■■■□ 3.45
NR1H3-216ENST00000462051 CYB5RLQ6IPT4 315 aa36.6■■■■□ 3.45
NR1H3-216ENST00000462051 FBLN2P98095 1184 aa36.58■■■■□ 3.45
NR1H3-216ENST00000462051 CHD1O14646 1710 aa36.58■■■■□ 3.45
NR1H3-216ENST00000462051 RAD54L2Q9Y4B4 1467 aa36.53■■■■□ 3.44
NR1H3-216ENST00000462051 SOGA1O94964 1423 aa36.51■■■■□ 3.43
NR1H3-216ENST00000462051 TDRD9Q8NDG6 1382 aaKnown RBP36.48■■■■□ 3.43
NR1H3-216ENST00000462051 ARAP1Q96P48 1450 aa36.37■■■■□ 3.41
NR1H3-216ENST00000462051 FGD5Q6ZNL6 1462 aa36.35■■■■□ 3.41
NR1H3-216ENST00000462051 CUX1P39880 1505 aa36.29■■■■□ 3.4
NR1H3-216ENST00000462051 SNAPC4Q5SXM2 1469 aa36.28■■■■□ 3.4
NR1H3-216ENST00000462051 WDR97A6NE52 1622 aa36.26■■■■□ 3.4
NR1H3-216ENST00000462051 TRHP20396 242 aaPredicted RBP36.26■■■■□ 3.4
NR1H3-216ENST00000462051 CHMP7Q8WUX9 453 aaPredicted RBP36.26■■■■□ 3.4
NR1H3-216ENST00000462051 MAGI1Q96QZ7 1491 aaPredicted RBP36.18■■■■□ 3.38
NR1H3-216ENST00000462051 GRIN2BQ13224 1484 aa36.17■■■■□ 3.38
NR1H3-216ENST00000462051 CLASP1Q7Z460 1538 aa36.15■■■■□ 3.38
NR1H3-216ENST00000462051 SYNJ1O43426 1573 aa36.1■■■■□ 3.37
NR1H3-216ENST00000462051 SYNJ2O15056 1496 aa36.07■■■■□ 3.37
NR1H3-216ENST00000462051 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
NR1H3-216ENST00000462051 PBRM1Q86U86 1689 aa35.96■■■■□ 3.35
NR1H3-216ENST00000462051 SUPT5HO00267 1087 aaKnown RBP35.95■■■■□ 3.35
NR1H3-216ENST00000462051 ABCA10Q8WWZ4 1543 aa35.93■■■■□ 3.34
NR1H3-216ENST00000462051 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
NR1H3-216ENST00000462051 WRNQ14191 1432 aaPredicted RBP eCLIP35.75■■■■□ 3.31
NR1H3-216ENST00000462051 GRIN2AQ12879 1464 aa35.69■■■■□ 3.3
NR1H3-216ENST00000462051 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
NR1H3-216ENST00000462051 ERCC6L2Q5T890 1561 aa35.61■■■■□ 3.29
NR1H3-216ENST00000462051 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
NR1H3-216ENST00000462051 NUP160Q12769 1436 aa35.59■■■■□ 3.29
NR1H3-216ENST00000462051 ADAMTS12P58397 1594 aa35.59■■■■□ 3.29
NR1H3-216ENST00000462051 CEP170Q5SW79 1584 aa35.56■■■■□ 3.28
NR1H3-216ENST00000462051 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
NR1H3-216ENST00000462051 ERICH3Q5RHP9 1530 aa35.47■■■■□ 3.27
NR1H3-216ENST00000462051 SHROOM2Q13796 1616 aa35.44■■■■□ 3.26
NR1H3-216ENST00000462051 AEBP2Q6ZN18 517 aaPredicted RBP35.39■■■■□ 3.26
NR1H3-216ENST00000462051 JPH4Q96JJ6 628 aa35.34■■■■□ 3.25
NR1H3-216ENST00000462051 PRG4Q92954 1404 aaPredicted RBP35.31■■■■□ 3.24
NR1H3-216ENST00000462051 KIF13AQ9H1H9 1805 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms