RNA–Protein interactions for RNA: ENST00000462047.1

PPP2R1A-204, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-204ENST00000462047 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
PPP2R1A-204ENST00000462047 ABCC9O60706 1549 aa37.45■■■■□ 3.59
PPP2R1A-204ENST00000462047 CCDC180Q9P1Z9 1646 aa37.43■■■■□ 3.58
PPP2R1A-204ENST00000462047 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
PPP2R1A-204ENST00000462047 NACADO15069 1562 aa35.48■■■■□ 3.27
PPP2R1A-204ENST00000462047 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
PPP2R1A-204ENST00000462047 DNAJC5BQ9UF47 199 aa35.12■■■■□ 3.21
PPP2R1A-204ENST00000462047 MYO15BQ96JP2 1530 aa35.03■■■■□ 3.2
PPP2R1A-204ENST00000462047 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
PPP2R1A-204ENST00000462047 UNC13AQ9UPW8 1703 aa34.68■■■■□ 3.14
PPP2R1A-204ENST00000462047 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
PPP2R1A-204ENST00000462047 DCAF1Q9Y4B6 1507 aa34.59■■■■□ 3.13
PPP2R1A-204ENST00000462047 BICRAQ9NZM4 1560 aa34.56■■■■□ 3.12
PPP2R1A-204ENST00000462047 SHROOM4Q9ULL8 1493 aa34.22■■■■□ 3.07
PPP2R1A-204ENST00000462047 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
PPP2R1A-204ENST00000462047 CC2D2AQ9P2K1 1620 aa33.79■■■■□ 3
PPP2R1A-204ENST00000462047 CECR2Q9BXF3 1484 aa33.76■■■■□ 3
PPP2R1A-204ENST00000462047 EIF4G1Q04637 1599 aaKnown RBP33.75■■■□□ 2.99
PPP2R1A-204ENST00000462047 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
PPP2R1A-204ENST00000462047 ATAD2BQ9ULI0 1458 aa32.66■■■□□ 2.82
PPP2R1A-204ENST00000462047 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
PPP2R1A-204ENST00000462047 SMARCA4P51532 1647 aa32.56■■■□□ 2.8
PPP2R1A-204ENST00000462047 BAZ1AQ9NRL2 1556 aaPredicted RBP32.48■■■□□ 2.79
PPP2R1A-204ENST00000462047 HMGXB3Q12766 1538 aa32.47■■■□□ 2.79
PPP2R1A-204ENST00000462047 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
PPP2R1A-204ENST00000462047 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
PPP2R1A-204ENST00000462047 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
PPP2R1A-204ENST00000462047 CUX2O14529 1486 aa32.29■■■□□ 2.76
PPP2R1A-204ENST00000462047 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
PPP2R1A-204ENST00000462047 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
PPP2R1A-204ENST00000462047 NESP48681 1621 aa32.15■■■□□ 2.74
PPP2R1A-204ENST00000462047 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
PPP2R1A-204ENST00000462047 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
PPP2R1A-204ENST00000462047 CADPSQ9ULU8 1353 aa31.82■■■□□ 2.69
PPP2R1A-204ENST00000462047 WIZO95785 1651 aa31.76■■■□□ 2.68
PPP2R1A-204ENST00000462047 THOC2Q8NI27 1593 aaKnown RBP31.74■■■□□ 2.67
PPP2R1A-204ENST00000462047 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
PPP2R1A-204ENST00000462047 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
PPP2R1A-204ENST00000462047 MRC2Q9UBG0 1479 aa31.53■■■□□ 2.64
PPP2R1A-204ENST00000462047 TOP2AP11388 1531 aaKnown RBP31.43■■■□□ 2.62
PPP2R1A-204ENST00000462047 CFTRP13569 1480 aa31.42■■■□□ 2.62
PPP2R1A-204ENST00000462047 CEP164Q9UPV0 1460 aa31.42■■■□□ 2.62
PPP2R1A-204ENST00000462047 WDR62O43379 1518 aa31.4■■■□□ 2.62
PPP2R1A-204ENST00000462047 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
PPP2R1A-204ENST00000462047 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
PPP2R1A-204ENST00000462047 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
PPP2R1A-204ENST00000462047 OSCARQ8IYS5 282 aa30.97■■■□□ 2.55
PPP2R1A-204ENST00000462047 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
PPP2R1A-204ENST00000462047 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
PPP2R1A-204ENST00000462047 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
PPP2R1A-204ENST00000462047 IFT140Q96RY7 1462 aa30.82■■■□□ 2.53
PPP2R1A-204ENST00000462047 TOPBP1Q92547 1522 aa30.78■■■□□ 2.52
PPP2R1A-204ENST00000462047 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
PPP2R1A-204ENST00000462047 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
PPP2R1A-204ENST00000462047 AQRO60306 1485 aaKnown RBP eCLIP30.48■■■□□ 2.472e-11■■■■■ 34.1
PPP2R1A-204ENST00000462047 POLA1P09884 1462 aaPredicted RBP30.47■■■□□ 2.47
PPP2R1A-204ENST00000462047 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
PPP2R1A-204ENST00000462047 TARBP1Q13395 1621 aaKnown RBP30.45■■■□□ 2.47
PPP2R1A-204ENST00000462047 SOGA1O94964 1423 aa30.43■■■□□ 2.46
PPP2R1A-204ENST00000462047 FBLN2P98095 1184 aa30.37■■■□□ 2.45
PPP2R1A-204ENST00000462047 RAD54L2Q9Y4B4 1467 aa30.37■■■□□ 2.45
PPP2R1A-204ENST00000462047 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
PPP2R1A-204ENST00000462047 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
PPP2R1A-204ENST00000462047 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
PPP2R1A-204ENST00000462047 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
PPP2R1A-204ENST00000462047 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
PPP2R1A-204ENST00000462047 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
PPP2R1A-204ENST00000462047 ARHGEF11O15085 1522 aa30.28■■■□□ 2.44
PPP2R1A-204ENST00000462047 CUX1P39880 1505 aa30.25■■■□□ 2.43
PPP2R1A-204ENST00000462047 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
PPP2R1A-204ENST00000462047 CYB5RLQ6IPT4 315 aa30.2■■■□□ 2.43
PPP2R1A-204ENST00000462047 CHD1O14646 1710 aa30.19■■■□□ 2.42
PPP2R1A-204ENST00000462047 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
PPP2R1A-204ENST00000462047 GRIN2BQ13224 1484 aa30.12■■■□□ 2.41
PPP2R1A-204ENST00000462047 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
PPP2R1A-204ENST00000462047 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
PPP2R1A-204ENST00000462047 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
PPP2R1A-204ENST00000462047 SYNJ2O15056 1496 aa30■■■□□ 2.39
PPP2R1A-204ENST00000462047 ABCA10Q8WWZ4 1543 aa29.97■■■□□ 2.39
PPP2R1A-204ENST00000462047 ARAP1Q96P48 1450 aa29.97■■■□□ 2.39
PPP2R1A-204ENST00000462047 SYNJ1O43426 1573 aa29.97■■■□□ 2.39
PPP2R1A-204ENST00000462047 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
PPP2R1A-204ENST00000462047 CLASP1Q7Z460 1538 aa29.91■■■□□ 2.38
PPP2R1A-204ENST00000462047 TRHP20396 242 aaPredicted RBP29.87■■■□□ 2.37
PPP2R1A-204ENST00000462047 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
PPP2R1A-204ENST00000462047 ABCA5Q8WWZ7 1642 aa29.83■■■□□ 2.37
PPP2R1A-204ENST00000462047 TOP2BQ02880 1626 aa29.78■■■□□ 2.36
PPP2R1A-204ENST00000462047 BIVM-ERCC5R4GMW8 1640 aa29.74■■■□□ 2.35
PPP2R1A-204ENST00000462047 GRIN2AQ12879 1464 aa29.69■■■□□ 2.34
PPP2R1A-204ENST00000462047 FHAD1B1AJZ9 1412 aa29.66■■■□□ 2.34
PPP2R1A-204ENST00000462047 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
PPP2R1A-204ENST00000462047 ADAMTS12P58397 1594 aa29.6■■■□□ 2.33
PPP2R1A-204ENST00000462047 NUP160Q12769 1436 aa29.6■■■□□ 2.33
PPP2R1A-204ENST00000462047 CEP170Q5SW79 1584 aa29.51■■■□□ 2.31
PPP2R1A-204ENST00000462047 JPH4Q96JJ6 628 aa29.42■■■□□ 2.3
PPP2R1A-204ENST00000462047 ERCC6L2Q5T890 1561 aa29.42■■■□□ 2.3
PPP2R1A-204ENST00000462047 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
PPP2R1A-204ENST00000462047 PRG4Q92954 1404 aaPredicted RBP29.36■■■□□ 2.29
PPP2R1A-204ENST00000462047 KIF27Q86VH2 1401 aa29.33■■■□□ 2.29
PPP2R1A-204ENST00000462047 IGF1RP08069 1367 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms