RNA–Protein interactions for RNA: ENST00000462001.1

IFRD2-206, Transcript of interferon related developmental regulator 2, humanhuman

TSL 2

Gene IFRD2, Length 891 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD2-206ENST00000462001 NISCHQ9Y2I1 1504 aa48.91■■■■■ 5.42
IFRD2-206ENST00000462001 CCDC180Q9P1Z9 1646 aa43.72■■■■■ 4.59
IFRD2-206ENST00000462001 ABCC9O60706 1549 aa43.05■■■■■ 4.48
IFRD2-206ENST00000462001 RB1CC1Q8TDY2 1594 aa41.32■■■■■ 4.2
IFRD2-206ENST00000462001 NACADO15069 1562 aa41.16■■■■■ 4.18
IFRD2-206ENST00000462001 DCAF8L2P0C7V8 631 aa41.08■■■■■ 4.17
IFRD2-206ENST00000462001 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
IFRD2-206ENST00000462001 ZCCHC6Q5VYS8 1495 aaKnown RBP40.66■■■■■ 4.1
IFRD2-206ENST00000462001 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
IFRD2-206ENST00000462001 UNC13AQ9UPW8 1703 aa40.36■■■■■ 4.05
IFRD2-206ENST00000462001 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
IFRD2-206ENST00000462001 BICRAQ9NZM4 1560 aa39.97■■■■□ 3.99
IFRD2-206ENST00000462001 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
IFRD2-206ENST00000462001 DNAJC5BQ9UF47 199 aa39.71■■■■□ 3.95
IFRD2-206ENST00000462001 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
IFRD2-206ENST00000462001 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
IFRD2-206ENST00000462001 CC2D2AQ9P2K1 1620 aa38.94■■■■□ 3.82
IFRD2-206ENST00000462001 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
IFRD2-206ENST00000462001 SMARCA4P51532 1647 aa38.05■■■■□ 3.68
IFRD2-206ENST00000462001 BAZ1AQ9NRL2 1556 aaPredicted RBP37.98■■■■□ 3.67
IFRD2-206ENST00000462001 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
IFRD2-206ENST00000462001 SMARCA2P51531 1590 aa37.9■■■■□ 3.66
IFRD2-206ENST00000462001 ATAD2BQ9ULI0 1458 aa37.9■■■■□ 3.66
IFRD2-206ENST00000462001 HMGXB3Q12766 1538 aa37.75■■■■□ 3.63
IFRD2-206ENST00000462001 PEG3Q9GZU2 1588 aa37.67■■■■□ 3.62
IFRD2-206ENST00000462001 MROH2BQ7Z745 1585 aa37.66■■■■□ 3.62
IFRD2-206ENST00000462001 BAZ1BQ9UIG0 1483 aaKnown RBP37.63■■■■□ 3.61
IFRD2-206ENST00000462001 WIZO95785 1651 aa37.28■■■■□ 3.56
IFRD2-206ENST00000462001 ERCC6Q03468 1493 aa37.2■■■■□ 3.55
IFRD2-206ENST00000462001 NESP48681 1621 aa37.11■■■■□ 3.53
IFRD2-206ENST00000462001 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
IFRD2-206ENST00000462001 LAMC3Q9Y6N6 1575 aa37.05■■■■□ 3.52
IFRD2-206ENST00000462001 CUX2O14529 1486 aa36.9■■■■□ 3.5
IFRD2-206ENST00000462001 TOP2AP11388 1531 aaKnown RBP36.88■■■■□ 3.49
IFRD2-206ENST00000462001 CADPSQ9ULU8 1353 aa36.82■■■■□ 3.49
IFRD2-206ENST00000462001 PDS5BQ9NTI5 1447 aa36.82■■■■□ 3.48
IFRD2-206ENST00000462001 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
IFRD2-206ENST00000462001 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
IFRD2-206ENST00000462001 CFTRP13569 1480 aa36.52■■■■□ 3.44
IFRD2-206ENST00000462001 MRC2Q9UBG0 1479 aa36.44■■■■□ 3.42
IFRD2-206ENST00000462001 CEP164Q9UPV0 1460 aa36.43■■■■□ 3.42
IFRD2-206ENST00000462001 FANCD2Q9BXW9 1451 aa36.42■■■■□ 3.42
IFRD2-206ENST00000462001 CCDC88BA6NC98 1476 aa36.4■■■■□ 3.42
IFRD2-206ENST00000462001 PRDM2Q13029 1718 aa36.33■■■■□ 3.41
IFRD2-206ENST00000462001 WDR62O43379 1518 aa36.32■■■■□ 3.4
IFRD2-206ENST00000462001 DNAJC5Q9H3Z4 198 aa36.13■■■■□ 3.37
IFRD2-206ENST00000462001 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
IFRD2-206ENST00000462001 SUPT5HO00267 1087 aaKnown RBP35.96■■■■□ 3.35
IFRD2-206ENST00000462001 ABCC8Q09428 1581 aa35.83■■■■□ 3.33
IFRD2-206ENST00000462001 TOPBP1Q92547 1522 aa35.79■■■■□ 3.32
IFRD2-206ENST00000462001 DNMBPQ6XZF7 1577 aa35.75■■■■□ 3.31
IFRD2-206ENST00000462001 IFT140Q96RY7 1462 aa35.68■■■■□ 3.3
IFRD2-206ENST00000462001 ZNF608Q9ULD9 1512 aaPredicted RBP35.48■■■■□ 3.27
IFRD2-206ENST00000462001 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.27
IFRD2-206ENST00000462001 TARBP1Q13395 1621 aaKnown RBP35.41■■■■□ 3.26
IFRD2-206ENST00000462001 EIF4G3O43432 1585 aaKnown RBP35.39■■■■□ 3.26
IFRD2-206ENST00000462001 CUX1P39880 1505 aa35.36■■■■□ 3.25
IFRD2-206ENST00000462001 FGD5Q6ZNL6 1462 aa35.34■■■■□ 3.25
IFRD2-206ENST00000462001 OSCARQ8IYS5 282 aa35.32■■■■□ 3.24
IFRD2-206ENST00000462001 SOGA1O94964 1423 aa35.32■■■■□ 3.24
IFRD2-206ENST00000462001 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
IFRD2-206ENST00000462001 AQRO60306 1485 aaKnown RBP eCLIP35.25■■■■□ 3.231e-8■■■■□ 19.3
IFRD2-206ENST00000462001 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
IFRD2-206ENST00000462001 TDRD9Q8NDG6 1382 aaKnown RBP35.14■■■■□ 3.22
IFRD2-206ENST00000462001 WRNQ14191 1432 aaPredicted RBP eCLIP35.06■■■■□ 3.2
IFRD2-206ENST00000462001 CHD1O14646 1710 aa35.04■■■■□ 3.2
IFRD2-206ENST00000462001 BIVM-ERCC5R4GMW8 1640 aa35.02■■■■□ 3.2
IFRD2-206ENST00000462001 TOP2BQ02880 1626 aa35.01■■■■□ 3.19
IFRD2-206ENST00000462001 FBLN2P98095 1184 aa34.98■■■■□ 3.19
IFRD2-206ENST00000462001 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
IFRD2-206ENST00000462001 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
IFRD2-206ENST00000462001 SYNJ1O43426 1573 aa34.96■■■■□ 3.19
IFRD2-206ENST00000462001 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
IFRD2-206ENST00000462001 MAGI1Q96QZ7 1491 aaPredicted RBP34.92■■■■□ 3.18
IFRD2-206ENST00000462001 GAPVD1Q14C86 1478 aa34.91■■■■□ 3.18
IFRD2-206ENST00000462001 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
IFRD2-206ENST00000462001 ABCA5Q8WWZ7 1642 aa34.87■■■■□ 3.17
IFRD2-206ENST00000462001 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
IFRD2-206ENST00000462001 CHMP7Q8WUX9 453 aaPredicted RBP34.83■■■■□ 3.17
IFRD2-206ENST00000462001 SYNJ2O15056 1496 aa34.78■■■■□ 3.16
IFRD2-206ENST00000462001 RIMBP3CA6NJZ7 1639 aa34.77■■■■□ 3.16
IFRD2-206ENST00000462001 RIMBP3BA6NNM3 1639 aa34.77■■■■□ 3.16
IFRD2-206ENST00000462001 RIMBP3Q9UFD9 1639 aa34.77■■■■□ 3.16
IFRD2-206ENST00000462001 ARHGEF11O15085 1522 aa34.72■■■■□ 3.15
IFRD2-206ENST00000462001 CLASP1Q7Z460 1538 aa34.59■■■■□ 3.13
IFRD2-206ENST00000462001 ADAMTS12P58397 1594 aa34.57■■■■□ 3.13
IFRD2-206ENST00000462001 ERICH3Q5RHP9 1530 aa34.56■■■■□ 3.12
IFRD2-206ENST00000462001 FHAD1B1AJZ9 1412 aa34.5■■■■□ 3.11
IFRD2-206ENST00000462001 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
IFRD2-206ENST00000462001 CYB5RLQ6IPT4 315 aa34.42■■■■□ 3.1
IFRD2-206ENST00000462001 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
IFRD2-206ENST00000462001 KIF27Q86VH2 1401 aa34.38■■■■□ 3.09
IFRD2-206ENST00000462001 CEP170Q5SW79 1584 aa34.33■■■■□ 3.09
IFRD2-206ENST00000462001 NUP160Q12769 1436 aa34.33■■■■□ 3.09
IFRD2-206ENST00000462001 CUL7Q14999 1698 aa34.23■■■■□ 3.07
IFRD2-206ENST00000462001 IGF1RP08069 1367 aa34.19■■■■□ 3.06
IFRD2-206ENST00000462001 SHROOM2Q13796 1616 aa34.15■■■■□ 3.06
IFRD2-206ENST00000462001 RUSC2Q8N2Y8 1516 aa34.07■■■■□ 3.04
IFRD2-206ENST00000462001 ERCC6L2Q5T890 1561 aa34.05■■■■□ 3.04
IFRD2-206ENST00000462001 CARMIL1Q5VZK9 1371 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms