RNA–Protein interactions for RNA: ENST00000461936.1

FMOD-202, Transcript of fibromodulin, humanhuman

TSL 3

Gene FMOD, Length 366 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-202ENST00000461936 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
FMOD-202ENST00000461936 ABCC9O60706 1549 aa26.73■■□□□ 1.87
FMOD-202ENST00000461936 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
FMOD-202ENST00000461936 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
FMOD-202ENST00000461936 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
FMOD-202ENST00000461936 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
FMOD-202ENST00000461936 NACADO15069 1562 aa24.84■■□□□ 1.57
FMOD-202ENST00000461936 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
FMOD-202ENST00000461936 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
FMOD-202ENST00000461936 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
FMOD-202ENST00000461936 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
FMOD-202ENST00000461936 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
FMOD-202ENST00000461936 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
FMOD-202ENST00000461936 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
FMOD-202ENST00000461936 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
FMOD-202ENST00000461936 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
FMOD-202ENST00000461936 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
FMOD-202ENST00000461936 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
FMOD-202ENST00000461936 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
FMOD-202ENST00000461936 CUX2O14529 1486 aa23.16■■□□□ 1.3
FMOD-202ENST00000461936 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
FMOD-202ENST00000461936 NCAPD3P42695 1498 aa23■■□□□ 1.27
FMOD-202ENST00000461936 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
FMOD-202ENST00000461936 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
FMOD-202ENST00000461936 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
FMOD-202ENST00000461936 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
FMOD-202ENST00000461936 NESP48681 1621 aa22.84■■□□□ 1.25
FMOD-202ENST00000461936 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
FMOD-202ENST00000461936 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
FMOD-202ENST00000461936 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
FMOD-202ENST00000461936 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
FMOD-202ENST00000461936 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
FMOD-202ENST00000461936 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
FMOD-202ENST00000461936 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
FMOD-202ENST00000461936 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
FMOD-202ENST00000461936 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
FMOD-202ENST00000461936 WIZO95785 1651 aa22.39■■□□□ 1.18
FMOD-202ENST00000461936 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
FMOD-202ENST00000461936 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
FMOD-202ENST00000461936 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
FMOD-202ENST00000461936 WDR62O43379 1518 aa22.19■■□□□ 1.14
FMOD-202ENST00000461936 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
FMOD-202ENST00000461936 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
FMOD-202ENST00000461936 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
FMOD-202ENST00000461936 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
FMOD-202ENST00000461936 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
FMOD-202ENST00000461936 CFTRP13569 1480 aa21.96■■□□□ 1.11
FMOD-202ENST00000461936 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
FMOD-202ENST00000461936 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
FMOD-202ENST00000461936 RIMBP3CA6NJZ7 1639 aa21.81■■□□□ 1.08
FMOD-202ENST00000461936 RIMBP3BA6NNM3 1639 aa21.81■■□□□ 1.08
FMOD-202ENST00000461936 RIMBP3Q9UFD9 1639 aa21.81■■□□□ 1.08
FMOD-202ENST00000461936 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
FMOD-202ENST00000461936 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
FMOD-202ENST00000461936 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
FMOD-202ENST00000461936 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
FMOD-202ENST00000461936 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
FMOD-202ENST00000461936 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
FMOD-202ENST00000461936 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
FMOD-202ENST00000461936 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
FMOD-202ENST00000461936 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.03
FMOD-202ENST00000461936 ARAP1Q96P48 1450 aa21.47■■□□□ 1.03
FMOD-202ENST00000461936 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
FMOD-202ENST00000461936 FBLN2P98095 1184 aa21.46■■□□□ 1.03
FMOD-202ENST00000461936 CHD1O14646 1710 aa21.41■■□□□ 1.02
FMOD-202ENST00000461936 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
FMOD-202ENST00000461936 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
FMOD-202ENST00000461936 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
FMOD-202ENST00000461936 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
FMOD-202ENST00000461936 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
FMOD-202ENST00000461936 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
FMOD-202ENST00000461936 WDR97A6NE52 1622 aa21.28■■□□□ 1
FMOD-202ENST00000461936 CUX1P39880 1505 aa21.24■□□□□ 0.99
FMOD-202ENST00000461936 SOGA1O94964 1423 aa21.23■□□□□ 0.99
FMOD-202ENST00000461936 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
FMOD-202ENST00000461936 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
FMOD-202ENST00000461936 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
FMOD-202ENST00000461936 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
FMOD-202ENST00000461936 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
FMOD-202ENST00000461936 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
FMOD-202ENST00000461936 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
FMOD-202ENST00000461936 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
FMOD-202ENST00000461936 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
FMOD-202ENST00000461936 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
FMOD-202ENST00000461936 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
FMOD-202ENST00000461936 SYNJ2O15056 1496 aa21.02■□□□□ 0.96
FMOD-202ENST00000461936 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
FMOD-202ENST00000461936 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
FMOD-202ENST00000461936 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
FMOD-202ENST00000461936 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.93
FMOD-202ENST00000461936 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
FMOD-202ENST00000461936 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
FMOD-202ENST00000461936 GRIN2AQ12879 1464 aa20.77■□□□□ 0.92
FMOD-202ENST00000461936 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
FMOD-202ENST00000461936 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
FMOD-202ENST00000461936 NUP160Q12769 1436 aa20.73■□□□□ 0.91
FMOD-202ENST00000461936 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
FMOD-202ENST00000461936 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
FMOD-202ENST00000461936 CUL7Q14999 1698 aa20.63■□□□□ 0.89
FMOD-202ENST00000461936 FAM69CQ0P6D2 419 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms