RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 NISCHQ9Y2I1 1504 aa53.11■■■■■ 6.09
HLA-A-205ENST00000461903 CCDC180Q9P1Z9 1646 aa47.01■■■■■ 5.12
HLA-A-205ENST00000461903 ABCC9O60706 1549 aa46.28■■■■■ 5
HLA-A-205ENST00000461903 ZCCHC6Q5VYS8 1495 aaKnown RBP44.41■■■■■ 4.7
HLA-A-205ENST00000461903 DCAF8L2P0C7V8 631 aa44.14■■■■■ 4.66
HLA-A-205ENST00000461903 NACADO15069 1562 aa44■■■■■ 4.63
HLA-A-205ENST00000461903 DCAF1Q9Y4B6 1507 aa43.98■■■■■ 4.63
HLA-A-205ENST00000461903 RB1CC1Q8TDY2 1594 aa43.95■■■■■ 4.63
HLA-A-205ENST00000461903 MYO15BQ96JP2 1530 aa43.91■■■■■ 4.62
HLA-A-205ENST00000461903 DNAJC5BQ9UF47 199 aa43.74■■■■■ 4.59
HLA-A-205ENST00000461903 PABPN1Q86U42 306 aaKnown RBP eCLIP42.96■■■■■ 4.47
HLA-A-205ENST00000461903 SCRIBQ14160 1630 aa42.95■■■■■ 4.47
HLA-A-205ENST00000461903 UNC13AQ9UPW8 1703 aa42.93■■■■■ 4.46
HLA-A-205ENST00000461903 BICRAQ9NZM4 1560 aa42.69■■■■■ 4.42
HLA-A-205ENST00000461903 SHROOM4Q9ULL8 1493 aa42.39■■■■■ 4.38
HLA-A-205ENST00000461903 CC2D2AQ9P2K1 1620 aa41.83■■■■■ 4.29
HLA-A-205ENST00000461903 CECR2Q9BXF3 1484 aa41.77■■■■■ 4.28
HLA-A-205ENST00000461903 EIF4G1Q04637 1599 aaKnown RBP41.67■■■■■ 4.26
HLA-A-205ENST00000461903 BAZ1AQ9NRL2 1556 aaPredicted RBP41.17■■■■■ 4.18
HLA-A-205ENST00000461903 SMARCA4P51532 1647 aa41.12■■■■■ 4.17
HLA-A-205ENST00000461903 MROH2BQ7Z745 1585 aa40.94■■■■■ 4.14
HLA-A-205ENST00000461903 SMARCA2P51531 1590 aa40.72■■■■■ 4.11
HLA-A-205ENST00000461903 RSF1Q96T23 1441 aaPredicted RBP40.69■■■■■ 4.1
HLA-A-205ENST00000461903 ATAD2BQ9ULI0 1458 aa40.68■■■■■ 4.1
HLA-A-205ENST00000461903 PEG3Q9GZU2 1588 aa40.66■■■■■ 4.1
HLA-A-205ENST00000461903 WIZO95785 1651 aa40.57■■■■■ 4.09
HLA-A-205ENST00000461903 NCAPD3P42695 1498 aa40.53■■■■■ 4.08
HLA-A-205ENST00000461903 DNAJC5Q9H3Z4 198 aa40.5■■■■■ 4.07
HLA-A-205ENST00000461903 HMGXB3Q12766 1538 aa40.47■■■■■ 4.07
HLA-A-205ENST00000461903 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
HLA-A-205ENST00000461903 SUPT5HO00267 1087 aaKnown RBP40.2■■■■■ 4.03
HLA-A-205ENST00000461903 TOP2AP11388 1531 aaKnown RBP40.2■■■■■ 4.03
HLA-A-205ENST00000461903 CUX2O14529 1486 aa40.15■■■■■ 4.02
HLA-A-205ENST00000461903 ERCC6Q03468 1493 aa40■■■■□ 3.99
HLA-A-205ENST00000461903 CCDC88BA6NC98 1476 aa39.66■■■■□ 3.94
HLA-A-205ENST00000461903 NESP48681 1621 aa39.65■■■■□ 3.94
HLA-A-205ENST00000461903 LAMC3Q9Y6N6 1575 aa39.44■■■■□ 3.9
HLA-A-205ENST00000461903 CADPSQ9ULU8 1353 aa39.41■■■■□ 3.9
HLA-A-205ENST00000461903 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
HLA-A-205ENST00000461903 CFTRP13569 1480 aa39.32■■■■□ 3.88
HLA-A-205ENST00000461903 PRDM2Q13029 1718 aa39.19■■■■□ 3.86
HLA-A-205ENST00000461903 KIF21AQ7Z4S6 1674 aa39.15■■■■□ 3.86
HLA-A-205ENST00000461903 PDS5BQ9NTI5 1447 aa39.14■■■■□ 3.86
HLA-A-205ENST00000461903 FANCD2Q9BXW9 1451 aa39■■■■□ 3.83
HLA-A-205ENST00000461903 CEP164Q9UPV0 1460 aa38.91■■■■□ 3.82
HLA-A-205ENST00000461903 MRC2Q9UBG0 1479 aa38.84■■■■□ 3.81
HLA-A-205ENST00000461903 WDR62O43379 1518 aa38.79■■■■□ 3.8
HLA-A-205ENST00000461903 URB2Q14146 1524 aaKnown RBP38.54■■■■□ 3.76
HLA-A-205ENST00000461903 ABCC8Q09428 1581 aa38.49■■■■□ 3.75
HLA-A-205ENST00000461903 DNMBPQ6XZF7 1577 aa38.49■■■■□ 3.75
HLA-A-205ENST00000461903 TRIM41Q8WV44 630 aa38.47■■■■□ 3.75
HLA-A-205ENST00000461903 TOPBP1Q92547 1522 aa38.44■■■■□ 3.74
HLA-A-205ENST00000461903 WRNQ14191 1432 aaPredicted RBP eCLIP38.41■■■■□ 3.74
HLA-A-205ENST00000461903 CUX1P39880 1505 aa38.38■■■■□ 3.74
HLA-A-205ENST00000461903 SYNJ1O43426 1573 aa38.28■■■■□ 3.72
HLA-A-205ENST00000461903 BIVM-ERCC5R4GMW8 1640 aa38.26■■■■□ 3.72
HLA-A-205ENST00000461903 TOP2BQ02880 1626 aa38.25■■■■□ 3.71
HLA-A-205ENST00000461903 FGD5Q6ZNL6 1462 aa38.18■■■■□ 3.7
HLA-A-205ENST00000461903 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
HLA-A-205ENST00000461903 OSCARQ8IYS5 282 aa38.15■■■■□ 3.7
HLA-A-205ENST00000461903 IFT140Q96RY7 1462 aa38.05■■■■□ 3.68
HLA-A-205ENST00000461903 SOGA1O94964 1423 aa38■■■■□ 3.67
HLA-A-205ENST00000461903 RAD54L2Q9Y4B4 1467 aa37.97■■■■□ 3.67
HLA-A-205ENST00000461903 TARBP1Q13395 1621 aaKnown RBP37.96■■■■□ 3.67
HLA-A-205ENST00000461903 WDR97A6NE52 1622 aa37.85■■■■□ 3.65
HLA-A-205ENST00000461903 CHIC1Q5VXU3 224 aa37.84■■■■□ 3.65
HLA-A-205ENST00000461903 ABCA10Q8WWZ4 1543 aa37.82■■■■□ 3.64
HLA-A-205ENST00000461903 ZNF608Q9ULD9 1512 aaPredicted RBP37.79■■■■□ 3.64
HLA-A-205ENST00000461903 RIMBP3CA6NJZ7 1639 aa37.75■■■■□ 3.63
HLA-A-205ENST00000461903 RIMBP3BA6NNM3 1639 aa37.75■■■■□ 3.63
HLA-A-205ENST00000461903 RIMBP3Q9UFD9 1639 aa37.75■■■■□ 3.63
HLA-A-205ENST00000461903 EIF4G3O43432 1585 aaKnown RBP37.74■■■■□ 3.63
HLA-A-205ENST00000461903 TDRD9Q8NDG6 1382 aaKnown RBP37.69■■■■□ 3.62
HLA-A-205ENST00000461903 AQRO60306 1485 aaKnown RBP eCLIP37.66■■■■□ 3.62
HLA-A-205ENST00000461903 ABCA5Q8WWZ7 1642 aa37.64■■■■□ 3.62
HLA-A-205ENST00000461903 ARHGEF11O15085 1522 aa37.61■■■■□ 3.61
HLA-A-205ENST00000461903 GAPVD1Q14C86 1478 aa37.59■■■■□ 3.61
HLA-A-205ENST00000461903 KIF27Q86VH2 1401 aa37.56■■■■□ 3.6
HLA-A-205ENST00000461903 PBRM1Q86U86 1689 aa37.54■■■■□ 3.6
HLA-A-205ENST00000461903 GRIN2BQ13224 1484 aa37.5■■■■□ 3.59
HLA-A-205ENST00000461903 ERICH3Q5RHP9 1530 aa37.4■■■■□ 3.58
HLA-A-205ENST00000461903 SNAPC4Q5SXM2 1469 aa37.38■■■■□ 3.57
HLA-A-205ENST00000461903 CHD1O14646 1710 aa37.37■■■■□ 3.57
HLA-A-205ENST00000461903 RUSC2Q8N2Y8 1516 aa37.35■■■■□ 3.57
HLA-A-205ENST00000461903 MAGI1Q96QZ7 1491 aaPredicted RBP37.34■■■■□ 3.57
HLA-A-205ENST00000461903 EEA1Q15075 1411 aa37.29■■■■□ 3.56
HLA-A-205ENST00000461903 ADAMTS12P58397 1594 aa37.25■■■■□ 3.55
HLA-A-205ENST00000461903 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
HLA-A-205ENST00000461903 CUL7Q14999 1698 aa37.24■■■■□ 3.55
HLA-A-205ENST00000461903 IGF1RP08069 1367 aa37.24■■■■□ 3.55
HLA-A-205ENST00000461903 ARAP1Q96P48 1450 aa37.2■■■■□ 3.55
HLA-A-205ENST00000461903 SYNJ2O15056 1496 aa37.18■■■■□ 3.54
HLA-A-205ENST00000461903 FHAD1B1AJZ9 1412 aa37.18■■■■□ 3.54
HLA-A-205ENST00000461903 FAM9AQ8IZU1 332 aaPredicted RBP37.15■■■■□ 3.54
HLA-A-205ENST00000461903 FBLN2P98095 1184 aa37.14■■■■□ 3.54
HLA-A-205ENST00000461903 CHMP7Q8WUX9 453 aaPredicted RBP37.1■■■■□ 3.53
HLA-A-205ENST00000461903 CARMIL1Q5VZK9 1371 aa37.08■■■■□ 3.53
HLA-A-205ENST00000461903 CSRNP3Q8WYN3 585 aa37.07■■■■□ 3.53
HLA-A-205ENST00000461903 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
HLA-A-205ENST00000461903 CLASP1Q7Z460 1538 aa36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms