RNA–Protein interactions for RNA: ENST00000461833.1

RFPL3S-204, Transcript of RFPL3 antisense, humanhuman

TSL 5

Gene RFPL3S, Length 334 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3S-204ENST00000461833 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
RFPL3S-204ENST00000461833 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
RFPL3S-204ENST00000461833 ABCC9O60706 1549 aa19.92■□□□□ 0.78
RFPL3S-204ENST00000461833 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
RFPL3S-204ENST00000461833 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
RFPL3S-204ENST00000461833 NACADO15069 1562 aa18.75■□□□□ 0.59
RFPL3S-204ENST00000461833 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
RFPL3S-204ENST00000461833 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
RFPL3S-204ENST00000461833 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
RFPL3S-204ENST00000461833 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
RFPL3S-204ENST00000461833 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
RFPL3S-204ENST00000461833 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
RFPL3S-204ENST00000461833 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
RFPL3S-204ENST00000461833 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
RFPL3S-204ENST00000461833 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
RFPL3S-204ENST00000461833 SHROOM4Q9ULL8 1493 aa17.97■□□□□ 0.47
RFPL3S-204ENST00000461833 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
RFPL3S-204ENST00000461833 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
RFPL3S-204ENST00000461833 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
RFPL3S-204ENST00000461833 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
RFPL3S-204ENST00000461833 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
RFPL3S-204ENST00000461833 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
RFPL3S-204ENST00000461833 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
RFPL3S-204ENST00000461833 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
RFPL3S-204ENST00000461833 NESP48681 1621 aa17.17■□□□□ 0.34
RFPL3S-204ENST00000461833 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
RFPL3S-204ENST00000461833 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
RFPL3S-204ENST00000461833 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
RFPL3S-204ENST00000461833 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
RFPL3S-204ENST00000461833 WIZO95785 1651 aa17.04■□□□□ 0.32
RFPL3S-204ENST00000461833 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
RFPL3S-204ENST00000461833 CUX2O14529 1486 aa17.03■□□□□ 0.32
RFPL3S-204ENST00000461833 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
RFPL3S-204ENST00000461833 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
RFPL3S-204ENST00000461833 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
RFPL3S-204ENST00000461833 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
RFPL3S-204ENST00000461833 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
RFPL3S-204ENST00000461833 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
RFPL3S-204ENST00000461833 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
RFPL3S-204ENST00000461833 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
RFPL3S-204ENST00000461833 WDR62O43379 1518 aa16.67■□□□□ 0.26
RFPL3S-204ENST00000461833 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
RFPL3S-204ENST00000461833 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
RFPL3S-204ENST00000461833 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
RFPL3S-204ENST00000461833 CFTRP13569 1480 aa16.6■□□□□ 0.25
RFPL3S-204ENST00000461833 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
RFPL3S-204ENST00000461833 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
RFPL3S-204ENST00000461833 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
RFPL3S-204ENST00000461833 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
RFPL3S-204ENST00000461833 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
RFPL3S-204ENST00000461833 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
RFPL3S-204ENST00000461833 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
RFPL3S-204ENST00000461833 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
RFPL3S-204ENST00000461833 CHD1O14646 1710 aa16.25■□□□□ 0.19
RFPL3S-204ENST00000461833 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
RFPL3S-204ENST00000461833 RIMBP3CA6NJZ7 1639 aa16.21■□□□□ 0.19
RFPL3S-204ENST00000461833 RIMBP3BA6NNM3 1639 aa16.21■□□□□ 0.19
RFPL3S-204ENST00000461833 RIMBP3Q9UFD9 1639 aa16.21■□□□□ 0.19
RFPL3S-204ENST00000461833 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
RFPL3S-204ENST00000461833 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
RFPL3S-204ENST00000461833 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.18
RFPL3S-204ENST00000461833 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
RFPL3S-204ENST00000461833 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
RFPL3S-204ENST00000461833 CUX1P39880 1505 aa16.12■□□□□ 0.17
RFPL3S-204ENST00000461833 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
RFPL3S-204ENST00000461833 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
RFPL3S-204ENST00000461833 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
RFPL3S-204ENST00000461833 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
RFPL3S-204ENST00000461833 SOGA1O94964 1423 aa16.05■□□□□ 0.16
RFPL3S-204ENST00000461833 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
RFPL3S-204ENST00000461833 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
RFPL3S-204ENST00000461833 FBLN2P98095 1184 aa16.02■□□□□ 0.16
RFPL3S-204ENST00000461833 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
RFPL3S-204ENST00000461833 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
RFPL3S-204ENST00000461833 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
RFPL3S-204ENST00000461833 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
RFPL3S-204ENST00000461833 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
RFPL3S-204ENST00000461833 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
RFPL3S-204ENST00000461833 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
RFPL3S-204ENST00000461833 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
RFPL3S-204ENST00000461833 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
RFPL3S-204ENST00000461833 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
RFPL3S-204ENST00000461833 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
RFPL3S-204ENST00000461833 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
RFPL3S-204ENST00000461833 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
RFPL3S-204ENST00000461833 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
RFPL3S-204ENST00000461833 ADAMTS12P58397 1594 aa15.8■□□□□ 0.12
RFPL3S-204ENST00000461833 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
RFPL3S-204ENST00000461833 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.12
RFPL3S-204ENST00000461833 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
RFPL3S-204ENST00000461833 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
RFPL3S-204ENST00000461833 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
RFPL3S-204ENST00000461833 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
RFPL3S-204ENST00000461833 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
RFPL3S-204ENST00000461833 NUP160Q12769 1436 aa15.65■□□□□ 0.1
RFPL3S-204ENST00000461833 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
RFPL3S-204ENST00000461833 RUSC2Q8N2Y8 1516 aa15.59■□□□□ 0.09
RFPL3S-204ENST00000461833 KIF13AQ9H1H9 1805 aa15.56■□□□□ 0.08
RFPL3S-204ENST00000461833 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
RFPL3S-204ENST00000461833 CUL7Q14999 1698 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms