RNA–Protein interactions for RNA: ENST00000461818.5

PCOLCE2-202, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 3

Gene PCOLCE2, Length 909 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-202ENST00000461818 NISCHQ9Y2I1 1504 aa60.38■■■■■ 7.26
PCOLCE2-202ENST00000461818 CCDC180Q9P1Z9 1646 aa53.88■■■■■ 6.22
PCOLCE2-202ENST00000461818 ABCC9O60706 1549 aa52.73■■■■■ 6.03
PCOLCE2-202ENST00000461818 RB1CC1Q8TDY2 1594 aa50.75■■■■■ 5.71
PCOLCE2-202ENST00000461818 NACADO15069 1562 aa50.63■■■■■ 5.7
PCOLCE2-202ENST00000461818 DCAF8L2P0C7V8 631 aa50.41■■■■■ 5.66
PCOLCE2-202ENST00000461818 ZCCHC6Q5VYS8 1495 aaKnown RBP50.28■■■■■ 5.64
PCOLCE2-202ENST00000461818 MYO15BQ96JP2 1530 aa50.26■■■■■ 5.64
PCOLCE2-202ENST00000461818 DCAF1Q9Y4B6 1507 aa49.99■■■■■ 5.59
PCOLCE2-202ENST00000461818 UNC13AQ9UPW8 1703 aa49.64■■■■■ 5.54
PCOLCE2-202ENST00000461818 PABPN1Q86U42 306 aaKnown RBP eCLIP49.17■■■■■ 5.46
PCOLCE2-202ENST00000461818 BICRAQ9NZM4 1560 aa49.15■■■■■ 5.46
PCOLCE2-202ENST00000461818 SCRIBQ14160 1630 aa49.07■■■■■ 5.45
PCOLCE2-202ENST00000461818 SHROOM4Q9ULL8 1493 aa48.71■■■■■ 5.39
PCOLCE2-202ENST00000461818 DNAJC5BQ9UF47 199 aa48.41■■■■■ 5.34
PCOLCE2-202ENST00000461818 EIF4G1Q04637 1599 aaKnown RBP47.9■■■■■ 5.26
PCOLCE2-202ENST00000461818 CC2D2AQ9P2K1 1620 aa47.74■■■■■ 5.23
PCOLCE2-202ENST00000461818 CECR2Q9BXF3 1484 aa47.41■■■■■ 5.18
PCOLCE2-202ENST00000461818 SMARCA4P51532 1647 aa46.94■■■■■ 5.1
PCOLCE2-202ENST00000461818 BAZ1AQ9NRL2 1556 aaPredicted RBP46.86■■■■■ 5.09
PCOLCE2-202ENST00000461818 SMARCA2P51531 1590 aa46.67■■■■■ 5.06
PCOLCE2-202ENST00000461818 ATAD2BQ9ULI0 1458 aa46.66■■■■■ 5.06
PCOLCE2-202ENST00000461818 NCAPD3P42695 1498 aa46.65■■■■■ 5.06
PCOLCE2-202ENST00000461818 MROH2BQ7Z745 1585 aa46.51■■■■■ 5.04
PCOLCE2-202ENST00000461818 HMGXB3Q12766 1538 aa46.49■■■■■ 5.03
PCOLCE2-202ENST00000461818 PEG3Q9GZU2 1588 aa46.47■■■■■ 5.03
PCOLCE2-202ENST00000461818 BAZ1BQ9UIG0 1483 aaKnown RBP46.31■■■■■ 5
PCOLCE2-202ENST00000461818 WIZO95785 1651 aa46.04■■■■■ 4.96
PCOLCE2-202ENST00000461818 RSF1Q96T23 1441 aaPredicted RBP45.89■■■■■ 4.94
PCOLCE2-202ENST00000461818 NESP48681 1621 aa45.57■■■■■ 4.89
PCOLCE2-202ENST00000461818 TOP2AP11388 1531 aaKnown RBP45.57■■■■■ 4.88
PCOLCE2-202ENST00000461818 LAMC3Q9Y6N6 1575 aa45.54■■■■■ 4.88
PCOLCE2-202ENST00000461818 ERCC6Q03468 1493 aa45.52■■■■■ 4.88
PCOLCE2-202ENST00000461818 CADPSQ9ULU8 1353 aa45.27■■■■■ 4.84
PCOLCE2-202ENST00000461818 PDS5BQ9NTI5 1447 aa45.18■■■■■ 4.82
PCOLCE2-202ENST00000461818 KIF21AQ7Z4S6 1674 aa45.15■■■■■ 4.82
PCOLCE2-202ENST00000461818 CUX2O14529 1486 aa45.1■■■■■ 4.81
PCOLCE2-202ENST00000461818 THOC2Q8NI27 1593 aaKnown RBP45.01■■■■■ 4.8
PCOLCE2-202ENST00000461818 CFTRP13569 1480 aa44.99■■■■■ 4.79
PCOLCE2-202ENST00000461818 CCDC88BA6NC98 1476 aa44.95■■■■■ 4.79
PCOLCE2-202ENST00000461818 PRDM2Q13029 1718 aa44.82■■■■■ 4.77
PCOLCE2-202ENST00000461818 FANCD2Q9BXW9 1451 aa44.79■■■■■ 4.76
PCOLCE2-202ENST00000461818 CEP164Q9UPV0 1460 aa44.78■■■■■ 4.76
PCOLCE2-202ENST00000461818 MRC2Q9UBG0 1479 aa44.74■■■■■ 4.75
PCOLCE2-202ENST00000461818 WDR62O43379 1518 aa44.61■■■■■ 4.73
PCOLCE2-202ENST00000461818 SUPT5HO00267 1087 aaKnown RBP44.56■■■■■ 4.72
PCOLCE2-202ENST00000461818 URB2Q14146 1524 aaKnown RBP44.34■■■■■ 4.69
PCOLCE2-202ENST00000461818 ABCC8Q09428 1581 aa44.08■■■■■ 4.65
PCOLCE2-202ENST00000461818 TOPBP1Q92547 1522 aa44.06■■■■■ 4.64
PCOLCE2-202ENST00000461818 DNMBPQ6XZF7 1577 aa44.04■■■■■ 4.64
PCOLCE2-202ENST00000461818 IFT140Q96RY7 1462 aa43.83■■■■■ 4.61
PCOLCE2-202ENST00000461818 DNAJC5Q9H3Z4 198 aa43.79■■■■■ 4.6
PCOLCE2-202ENST00000461818 POLA1P09884 1462 aaPredicted RBP43.67■■■■■ 4.58
PCOLCE2-202ENST00000461818 CUX1P39880 1505 aa43.66■■■■■ 4.58
PCOLCE2-202ENST00000461818 TARBP1Q13395 1621 aaKnown RBP43.62■■■■■ 4.57
PCOLCE2-202ENST00000461818 ZNF608Q9ULD9 1512 aaPredicted RBP43.6■■■■■ 4.57
PCOLCE2-202ENST00000461818 FGD5Q6ZNL6 1462 aa43.55■■■■■ 4.56
PCOLCE2-202ENST00000461818 EIF4G3O43432 1585 aaKnown RBP43.53■■■■■ 4.56
PCOLCE2-202ENST00000461818 SOGA1O94964 1423 aa43.45■■■■■ 4.55
PCOLCE2-202ENST00000461818 RAD54L2Q9Y4B4 1467 aa43.44■■■■■ 4.54
PCOLCE2-202ENST00000461818 WDR97A6NE52 1622 aa43.34■■■■■ 4.53
PCOLCE2-202ENST00000461818 BIVM-ERCC5R4GMW8 1640 aa43.32■■■■■ 4.53
PCOLCE2-202ENST00000461818 AQRO60306 1485 aaKnown RBP eCLIP43.32■■■■■ 4.52
PCOLCE2-202ENST00000461818 WRNQ14191 1432 aaPredicted RBP eCLIP43.31■■■■■ 4.52
PCOLCE2-202ENST00000461818 TOP2BQ02880 1626 aa43.29■■■■■ 4.52
PCOLCE2-202ENST00000461818 SYNJ1O43426 1573 aa43.24■■■■■ 4.51
PCOLCE2-202ENST00000461818 TDRD9Q8NDG6 1382 aaKnown RBP43.2■■■■■ 4.51
PCOLCE2-202ENST00000461818 ABCA10Q8WWZ4 1543 aa43.12■■■■■ 4.49
PCOLCE2-202ENST00000461818 OSCARQ8IYS5 282 aa43.11■■■■■ 4.49
PCOLCE2-202ENST00000461818 CHD1O14646 1710 aa43.03■■■■■ 4.48
PCOLCE2-202ENST00000461818 PBRM1Q86U86 1689 aa43.02■■■■■ 4.48
PCOLCE2-202ENST00000461818 GRIN2BQ13224 1484 aa43.01■■■■■ 4.48
PCOLCE2-202ENST00000461818 ABCA5Q8WWZ7 1642 aa43.01■■■■■ 4.48
PCOLCE2-202ENST00000461818 GAPVD1Q14C86 1478 aa42.99■■■■■ 4.47
PCOLCE2-202ENST00000461818 SNAPC4Q5SXM2 1469 aa42.98■■■■■ 4.47
PCOLCE2-202ENST00000461818 MAGI1Q96QZ7 1491 aaPredicted RBP42.94■■■■■ 4.47
PCOLCE2-202ENST00000461818 FBLN2P98095 1184 aa42.82■■■■■ 4.45
PCOLCE2-202ENST00000461818 SYNJ2O15056 1496 aa42.75■■■■■ 4.43
PCOLCE2-202ENST00000461818 CHMP7Q8WUX9 453 aaPredicted RBP42.7■■■■■ 4.43
PCOLCE2-202ENST00000461818 ERICH3Q5RHP9 1530 aa42.63■■■■■ 4.42
PCOLCE2-202ENST00000461818 ADAMTS12P58397 1594 aa42.61■■■■■ 4.41
PCOLCE2-202ENST00000461818 RIMBP3CA6NJZ7 1639 aa42.54■■■■■ 4.4
PCOLCE2-202ENST00000461818 RIMBP3BA6NNM3 1639 aa42.54■■■■■ 4.4
PCOLCE2-202ENST00000461818 RIMBP3Q9UFD9 1639 aa42.54■■■■■ 4.4
PCOLCE2-202ENST00000461818 CLASP1Q7Z460 1538 aa42.51■■■■■ 4.39
PCOLCE2-202ENST00000461818 ARHGEF11O15085 1522 aa42.5■■■■■ 4.39
PCOLCE2-202ENST00000461818 FHAD1B1AJZ9 1412 aa42.48■■■■■ 4.39
PCOLCE2-202ENST00000461818 GRIN2AQ12879 1464 aa42.47■■■■■ 4.39
PCOLCE2-202ENST00000461818 KIF27Q86VH2 1401 aa42.43■■■■■ 4.38
PCOLCE2-202ENST00000461818 TRIM41Q8WV44 630 aa42.31■■■■■ 4.36
PCOLCE2-202ENST00000461818 CUL7Q14999 1698 aa42.27■■■■■ 4.36
PCOLCE2-202ENST00000461818 NUP160Q12769 1436 aa42.27■■■■■ 4.36
PCOLCE2-202ENST00000461818 CEP170Q5SW79 1584 aa42.27■■■■■ 4.36
PCOLCE2-202ENST00000461818 IGF1RP08069 1367 aa42.2■■■■■ 4.35
PCOLCE2-202ENST00000461818 ARAP1Q96P48 1450 aa42.11■■■■■ 4.33
PCOLCE2-202ENST00000461818 SHROOM2Q13796 1616 aa42.02■■■■■ 4.32
PCOLCE2-202ENST00000461818 CYB5RLQ6IPT4 315 aa42.01■■■■■ 4.32
PCOLCE2-202ENST00000461818 RUSC2Q8N2Y8 1516 aa42■■■■■ 4.31
PCOLCE2-202ENST00000461818 CARMIL1Q5VZK9 1371 aa41.99■■■■■ 4.31
PCOLCE2-202ENST00000461818 ERCC6L2Q5T890 1561 aa41.85■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms