RNA–Protein interactions for RNA: ENST00000461815.1

PDPK1-206, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 3

Gene PDPK1, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-206ENST00000461815 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
PDPK1-206ENST00000461815 ABCC9O60706 1549 aa35.26■■■■□ 3.23
PDPK1-206ENST00000461815 CCDC180Q9P1Z9 1646 aa35.19■■■■□ 3.22
PDPK1-206ENST00000461815 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
PDPK1-206ENST00000461815 NACADO15069 1562 aa33.3■■■□□ 2.92
PDPK1-206ENST00000461815 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
PDPK1-206ENST00000461815 DNAJC5BQ9UF47 199 aa33.01■■■□□ 2.87
PDPK1-206ENST00000461815 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
PDPK1-206ENST00000461815 MYO15BQ96JP2 1530 aa32.78■■■□□ 2.84
PDPK1-206ENST00000461815 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
PDPK1-206ENST00000461815 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
PDPK1-206ENST00000461815 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
PDPK1-206ENST00000461815 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
PDPK1-206ENST00000461815 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
PDPK1-206ENST00000461815 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
PDPK1-206ENST00000461815 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.69
PDPK1-206ENST00000461815 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
PDPK1-206ENST00000461815 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
PDPK1-206ENST00000461815 NCAPD3P42695 1498 aa30.7■■■□□ 2.51
PDPK1-206ENST00000461815 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
PDPK1-206ENST00000461815 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
PDPK1-206ENST00000461815 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
PDPK1-206ENST00000461815 ERCC6Q03468 1493 aa30.52■■■□□ 2.48
PDPK1-206ENST00000461815 HMGXB3Q12766 1538 aa30.5■■■□□ 2.47
PDPK1-206ENST00000461815 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
PDPK1-206ENST00000461815 CUX2O14529 1486 aa30.43■■■□□ 2.46
PDPK1-206ENST00000461815 DNAJC5Q9H3Z4 198 aa30.41■■■□□ 2.46
PDPK1-206ENST00000461815 BAZ1BQ9UIG0 1483 aaKnown RBP30.37■■■□□ 2.45
PDPK1-206ENST00000461815 PEG3Q9GZU2 1588 aa30.25■■■□□ 2.43
PDPK1-206ENST00000461815 NESP48681 1621 aa30.24■■■□□ 2.43
PDPK1-206ENST00000461815 MROH2BQ7Z745 1585 aa30.17■■■□□ 2.42
PDPK1-206ENST00000461815 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
PDPK1-206ENST00000461815 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
PDPK1-206ENST00000461815 PDS5BQ9NTI5 1447 aa29.92■■■□□ 2.38
PDPK1-206ENST00000461815 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
PDPK1-206ENST00000461815 WIZO95785 1651 aa29.81■■■□□ 2.36
PDPK1-206ENST00000461815 CADPSQ9ULU8 1353 aa29.79■■■□□ 2.36
PDPK1-206ENST00000461815 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
PDPK1-206ENST00000461815 WDR62O43379 1518 aa29.55■■■□□ 2.32
PDPK1-206ENST00000461815 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
PDPK1-206ENST00000461815 RSF1Q96T23 1441 aaPredicted RBP29.53■■■□□ 2.32
PDPK1-206ENST00000461815 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
PDPK1-206ENST00000461815 TOP2AP11388 1531 aaKnown RBP29.47■■■□□ 2.31
PDPK1-206ENST00000461815 CFTRP13569 1480 aa29.42■■■□□ 2.3
PDPK1-206ENST00000461815 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.26
PDPK1-206ENST00000461815 PRDM2Q13029 1718 aa29.14■■■□□ 2.26
PDPK1-206ENST00000461815 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
PDPK1-206ENST00000461815 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
PDPK1-206ENST00000461815 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
PDPK1-206ENST00000461815 IFT140Q96RY7 1462 aa28.94■■■□□ 2.22
PDPK1-206ENST00000461815 TOPBP1Q92547 1522 aa28.89■■■□□ 2.22
PDPK1-206ENST00000461815 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
PDPK1-206ENST00000461815 ZNF608Q9ULD9 1512 aaPredicted RBP28.85■■■□□ 2.21
PDPK1-206ENST00000461815 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
PDPK1-206ENST00000461815 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
PDPK1-206ENST00000461815 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
PDPK1-206ENST00000461815 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
PDPK1-206ENST00000461815 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
PDPK1-206ENST00000461815 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
PDPK1-206ENST00000461815 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
PDPK1-206ENST00000461815 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.173e-6■■■■□ 25.5
PDPK1-206ENST00000461815 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
PDPK1-206ENST00000461815 CHD1O14646 1710 aa28.5■■■□□ 2.15
PDPK1-206ENST00000461815 FBLN2P98095 1184 aa28.5■■■□□ 2.15
PDPK1-206ENST00000461815 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
PDPK1-206ENST00000461815 SOGA1O94964 1423 aa28.48■■■□□ 2.15
PDPK1-206ENST00000461815 FGD5Q6ZNL6 1462 aa28.42■■■□□ 2.14
PDPK1-206ENST00000461815 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
PDPK1-206ENST00000461815 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
PDPK1-206ENST00000461815 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
PDPK1-206ENST00000461815 CUX1P39880 1505 aa28.36■■■□□ 2.13
PDPK1-206ENST00000461815 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
PDPK1-206ENST00000461815 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
PDPK1-206ENST00000461815 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
PDPK1-206ENST00000461815 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
PDPK1-206ENST00000461815 MAGI1Q96QZ7 1491 aaPredicted RBP28.26■■■□□ 2.11
PDPK1-206ENST00000461815 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
PDPK1-206ENST00000461815 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
PDPK1-206ENST00000461815 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
PDPK1-206ENST00000461815 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
PDPK1-206ENST00000461815 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
PDPK1-206ENST00000461815 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
PDPK1-206ENST00000461815 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
PDPK1-206ENST00000461815 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
PDPK1-206ENST00000461815 ABCA5Q8WWZ7 1642 aa28.04■■■□□ 2.08
PDPK1-206ENST00000461815 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
PDPK1-206ENST00000461815 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
PDPK1-206ENST00000461815 BIVM-ERCC5R4GMW8 1640 aa27.9■■■□□ 2.06
PDPK1-206ENST00000461815 GRIN2AQ12879 1464 aa27.88■■■□□ 2.05
PDPK1-206ENST00000461815 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
PDPK1-206ENST00000461815 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
PDPK1-206ENST00000461815 NUP160Q12769 1436 aa27.76■■■□□ 2.04
PDPK1-206ENST00000461815 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
PDPK1-206ENST00000461815 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
PDPK1-206ENST00000461815 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
PDPK1-206ENST00000461815 SHROOM2Q13796 1616 aa27.63■■■□□ 2.01
PDPK1-206ENST00000461815 PRG4Q92954 1404 aaPredicted RBP27.53■■■□□ 2
PDPK1-206ENST00000461815 JPH4Q96JJ6 628 aa27.49■■□□□ 1.99
PDPK1-206ENST00000461815 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
PDPK1-206ENST00000461815 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms