RNA–Protein interactions for RNA: ENST00000461712.6

LCK-207, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-207ENST00000461712 NISCHQ9Y2I1 1504 aa31.53■■■□□ 2.64
LCK-207ENST00000461712 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
LCK-207ENST00000461712 ABCC9O60706 1549 aa28.04■■■□□ 2.08
LCK-207ENST00000461712 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
LCK-207ENST00000461712 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
LCK-207ENST00000461712 NACADO15069 1562 aa26.62■■□□□ 1.85
LCK-207ENST00000461712 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
LCK-207ENST00000461712 PABPN1Q86U42 306 aaKnown RBP eCLIP26.2■■□□□ 1.78
LCK-207ENST00000461712 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
LCK-207ENST00000461712 DNAJC5BQ9UF47 199 aa26.1■■□□□ 1.77
LCK-207ENST00000461712 UNC13AQ9UPW8 1703 aa26.03■■□□□ 1.76
LCK-207ENST00000461712 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
LCK-207ENST00000461712 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.73
LCK-207ENST00000461712 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
LCK-207ENST00000461712 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
LCK-207ENST00000461712 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
LCK-207ENST00000461712 EIF4G1Q04637 1599 aaKnown RBP25.28■■□□□ 1.64
LCK-207ENST00000461712 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
LCK-207ENST00000461712 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
LCK-207ENST00000461712 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
LCK-207ENST00000461712 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
LCK-207ENST00000461712 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
LCK-207ENST00000461712 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
LCK-207ENST00000461712 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
LCK-207ENST00000461712 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
LCK-207ENST00000461712 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
LCK-207ENST00000461712 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
LCK-207ENST00000461712 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
LCK-207ENST00000461712 NESP48681 1621 aa24.11■■□□□ 1.45
LCK-207ENST00000461712 CUX2O14529 1486 aa24.06■■□□□ 1.44
LCK-207ENST00000461712 WIZO95785 1651 aa23.99■■□□□ 1.43
LCK-207ENST00000461712 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
LCK-207ENST00000461712 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
LCK-207ENST00000461712 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.41
LCK-207ENST00000461712 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
LCK-207ENST00000461712 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
LCK-207ENST00000461712 THOC2Q8NI27 1593 aaKnown RBP23.76■■□□□ 1.39
LCK-207ENST00000461712 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
LCK-207ENST00000461712 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
LCK-207ENST00000461712 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
LCK-207ENST00000461712 CFTRP13569 1480 aa23.61■■□□□ 1.37
LCK-207ENST00000461712 FANCD2Q9BXW9 1451 aa23.6■■□□□ 1.37
LCK-207ENST00000461712 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
LCK-207ENST00000461712 WDR62O43379 1518 aa23.52■■□□□ 1.36
LCK-207ENST00000461712 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
LCK-207ENST00000461712 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
LCK-207ENST00000461712 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
LCK-207ENST00000461712 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
LCK-207ENST00000461712 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
LCK-207ENST00000461712 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
LCK-207ENST00000461712 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
LCK-207ENST00000461712 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
LCK-207ENST00000461712 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
LCK-207ENST00000461712 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
LCK-207ENST00000461712 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
LCK-207ENST00000461712 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
LCK-207ENST00000461712 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.25
LCK-207ENST00000461712 SOGA1O94964 1423 aa22.89■■□□□ 1.25
LCK-207ENST00000461712 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
LCK-207ENST00000461712 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
LCK-207ENST00000461712 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
LCK-207ENST00000461712 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
LCK-207ENST00000461712 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
LCK-207ENST00000461712 FBLN2P98095 1184 aa22.82■■□□□ 1.24
LCK-207ENST00000461712 CUX1P39880 1505 aa22.8■■□□□ 1.24
LCK-207ENST00000461712 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
LCK-207ENST00000461712 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
LCK-207ENST00000461712 CHD1O14646 1710 aa22.66■■□□□ 1.22
LCK-207ENST00000461712 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
LCK-207ENST00000461712 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
LCK-207ENST00000461712 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
LCK-207ENST00000461712 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
LCK-207ENST00000461712 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
LCK-207ENST00000461712 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
LCK-207ENST00000461712 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
LCK-207ENST00000461712 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
LCK-207ENST00000461712 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
LCK-207ENST00000461712 CYB5RLQ6IPT4 315 aa22.56■■□□□ 1.2
LCK-207ENST00000461712 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
LCK-207ENST00000461712 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
LCK-207ENST00000461712 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
LCK-207ENST00000461712 SYNJ1O43426 1573 aa22.48■■□□□ 1.19
LCK-207ENST00000461712 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
LCK-207ENST00000461712 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
LCK-207ENST00000461712 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
LCK-207ENST00000461712 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
LCK-207ENST00000461712 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
LCK-207ENST00000461712 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
LCK-207ENST00000461712 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
LCK-207ENST00000461712 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
LCK-207ENST00000461712 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
LCK-207ENST00000461712 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
LCK-207ENST00000461712 NUP160Q12769 1436 aa22.22■■□□□ 1.15
LCK-207ENST00000461712 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
LCK-207ENST00000461712 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
LCK-207ENST00000461712 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
LCK-207ENST00000461712 IGF1RP08069 1367 aa22.1■■□□□ 1.13
LCK-207ENST00000461712 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.13
LCK-207ENST00000461712 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
LCK-207ENST00000461712 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms