RNA–Protein interactions for RNA: ENST00000461679.1

C9orf72-204, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 5

Gene C9orf72, Length 862 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-204ENST00000461679 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
C9orf72-204ENST00000461679 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
C9orf72-204ENST00000461679 ABCC9O60706 1549 aa28.65■■■□□ 2.18
C9orf72-204ENST00000461679 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
C9orf72-204ENST00000461679 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
C9orf72-204ENST00000461679 NACADO15069 1562 aa27.29■■□□□ 1.96
C9orf72-204ENST00000461679 ZCCHC6Q5VYS8 1495 aaKnown RBP27.05■■□□□ 1.92
C9orf72-204ENST00000461679 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
C9orf72-204ENST00000461679 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
C9orf72-204ENST00000461679 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
C9orf72-204ENST00000461679 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
C9orf72-204ENST00000461679 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
C9orf72-204ENST00000461679 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
C9orf72-204ENST00000461679 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
C9orf72-204ENST00000461679 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
C9orf72-204ENST00000461679 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
C9orf72-204ENST00000461679 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
C9orf72-204ENST00000461679 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
C9orf72-204ENST00000461679 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
C9orf72-204ENST00000461679 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
C9orf72-204ENST00000461679 ATAD2BQ9ULI0 1458 aa25.19■■□□□ 1.62
C9orf72-204ENST00000461679 NCAPD3P42695 1498 aa25.17■■□□□ 1.62
C9orf72-204ENST00000461679 SMARCA2P51531 1590 aa25.14■■□□□ 1.62
C9orf72-204ENST00000461679 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
C9orf72-204ENST00000461679 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
C9orf72-204ENST00000461679 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
C9orf72-204ENST00000461679 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
C9orf72-204ENST00000461679 WIZO95785 1651 aa24.85■■□□□ 1.57
C9orf72-204ENST00000461679 NESP48681 1621 aa24.73■■□□□ 1.55
C9orf72-204ENST00000461679 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
C9orf72-204ENST00000461679 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
C9orf72-204ENST00000461679 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
C9orf72-204ENST00000461679 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
C9orf72-204ENST00000461679 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
C9orf72-204ENST00000461679 CUX2O14529 1486 aa24.44■■□□□ 1.5
C9orf72-204ENST00000461679 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
C9orf72-204ENST00000461679 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
C9orf72-204ENST00000461679 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
C9orf72-204ENST00000461679 CFTRP13569 1480 aa24.26■■□□□ 1.47
C9orf72-204ENST00000461679 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
C9orf72-204ENST00000461679 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
C9orf72-204ENST00000461679 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
C9orf72-204ENST00000461679 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
C9orf72-204ENST00000461679 WDR62O43379 1518 aa24.1■■□□□ 1.45
C9orf72-204ENST00000461679 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
C9orf72-204ENST00000461679 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
C9orf72-204ENST00000461679 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
C9orf72-204ENST00000461679 DNAJC5Q9H3Z4 198 aa23.92■■□□□ 1.42
C9orf72-204ENST00000461679 TOPBP1Q92547 1522 aa23.8■■□□□ 1.4
C9orf72-204ENST00000461679 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
C9orf72-204ENST00000461679 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
C9orf72-204ENST00000461679 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
C9orf72-204ENST00000461679 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
C9orf72-204ENST00000461679 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
C9orf72-204ENST00000461679 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
C9orf72-204ENST00000461679 CUX1P39880 1505 aa23.56■■□□□ 1.36
C9orf72-204ENST00000461679 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
C9orf72-204ENST00000461679 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
C9orf72-204ENST00000461679 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
C9orf72-204ENST00000461679 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
C9orf72-204ENST00000461679 SOGA1O94964 1423 aa23.49■■□□□ 1.35
C9orf72-204ENST00000461679 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.35
C9orf72-204ENST00000461679 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
C9orf72-204ENST00000461679 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
C9orf72-204ENST00000461679 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.32
C9orf72-204ENST00000461679 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
C9orf72-204ENST00000461679 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
C9orf72-204ENST00000461679 CHD1O14646 1710 aa23.29■■□□□ 1.32
C9orf72-204ENST00000461679 FBLN2P98095 1184 aa23.29■■□□□ 1.32
C9orf72-204ENST00000461679 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
C9orf72-204ENST00000461679 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
C9orf72-204ENST00000461679 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
C9orf72-204ENST00000461679 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
C9orf72-204ENST00000461679 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
C9orf72-204ENST00000461679 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
C9orf72-204ENST00000461679 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
C9orf72-204ENST00000461679 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
C9orf72-204ENST00000461679 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
C9orf72-204ENST00000461679 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
C9orf72-204ENST00000461679 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
C9orf72-204ENST00000461679 RIMBP3CA6NJZ7 1639 aa23.1■■□□□ 1.29
C9orf72-204ENST00000461679 RIMBP3BA6NNM3 1639 aa23.1■■□□□ 1.29
C9orf72-204ENST00000461679 RIMBP3Q9UFD9 1639 aa23.1■■□□□ 1.29
C9orf72-204ENST00000461679 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
C9orf72-204ENST00000461679 ARHGEF11O15085 1522 aa23.05■■□□□ 1.28
C9orf72-204ENST00000461679 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
C9orf72-204ENST00000461679 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
C9orf72-204ENST00000461679 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
C9orf72-204ENST00000461679 GRIN2AQ12879 1464 aa22.93■■□□□ 1.26
C9orf72-204ENST00000461679 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
C9orf72-204ENST00000461679 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
C9orf72-204ENST00000461679 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
C9orf72-204ENST00000461679 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
C9orf72-204ENST00000461679 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
C9orf72-204ENST00000461679 NUP160Q12769 1436 aa22.81■■□□□ 1.24
C9orf72-204ENST00000461679 IGF1RP08069 1367 aa22.76■■□□□ 1.23
C9orf72-204ENST00000461679 CUL7Q14999 1698 aa22.73■■□□□ 1.23
C9orf72-204ENST00000461679 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
C9orf72-204ENST00000461679 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
C9orf72-204ENST00000461679 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms