RNA–Protein interactions for RNA: ENST00000461640.1

TMEM18-206, Transcript of transmembrane protein 18, humanhuman

TSL 3

Gene TMEM18, Length 844 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM18-206ENST00000461640 NISCHQ9Y2I1 1504 aa55.74■■■■■ 6.51
TMEM18-206ENST00000461640 CCDC180Q9P1Z9 1646 aa49.71■■■■■ 5.55
TMEM18-206ENST00000461640 ABCC9O60706 1549 aa49.46■■■■■ 5.51
TMEM18-206ENST00000461640 RB1CC1Q8TDY2 1594 aa47.17■■■■■ 5.14
TMEM18-206ENST00000461640 NACADO15069 1562 aa46.98■■■■■ 5.11
TMEM18-206ENST00000461640 DCAF8L2P0C7V8 631 aa46.89■■■■■ 5.1
TMEM18-206ENST00000461640 MYO15BQ96JP2 1530 aa46.51■■■■■ 5.04
TMEM18-206ENST00000461640 ZCCHC6Q5VYS8 1495 aaKnown RBP46.28■■■■■ 5
TMEM18-206ENST00000461640 PABPN1Q86U42 306 aaKnown RBP eCLIP46.18■■■■■ 4.98
TMEM18-206ENST00000461640 DNAJC5BQ9UF47 199 aa46.18■■■■■ 4.98
TMEM18-206ENST00000461640 DCAF1Q9Y4B6 1507 aa46.06■■■■■ 4.96
TMEM18-206ENST00000461640 UNC13AQ9UPW8 1703 aa46.04■■■■■ 4.96
TMEM18-206ENST00000461640 BICRAQ9NZM4 1560 aa45.87■■■■■ 4.93
TMEM18-206ENST00000461640 SCRIBQ14160 1630 aa45.37■■■■■ 4.85
TMEM18-206ENST00000461640 SHROOM4Q9ULL8 1493 aa45.23■■■■■ 4.83
TMEM18-206ENST00000461640 EIF4G1Q04637 1599 aaKnown RBP44.68■■■■■ 4.74
TMEM18-206ENST00000461640 CC2D2AQ9P2K1 1620 aa44.66■■■■■ 4.74
TMEM18-206ENST00000461640 CECR2Q9BXF3 1484 aa44.51■■■■■ 4.72
TMEM18-206ENST00000461640 NCAPD3P42695 1498 aa43.45■■■■■ 4.55
TMEM18-206ENST00000461640 ATAD2BQ9ULI0 1458 aa43.37■■■■■ 4.53
TMEM18-206ENST00000461640 SMARCA4P51532 1647 aa43.34■■■■■ 4.53
TMEM18-206ENST00000461640 BAZ1AQ9NRL2 1556 aaPredicted RBP43.19■■■■■ 4.5
TMEM18-206ENST00000461640 SMARCA2P51531 1590 aa43.18■■■■■ 4.5
TMEM18-206ENST00000461640 HMGXB3Q12766 1538 aa43.08■■■■■ 4.49
TMEM18-206ENST00000461640 MROH2BQ7Z745 1585 aa42.97■■■■■ 4.47
TMEM18-206ENST00000461640 PEG3Q9GZU2 1588 aa42.95■■■■■ 4.47
TMEM18-206ENST00000461640 BAZ1BQ9UIG0 1483 aaKnown RBP42.91■■■■■ 4.46
TMEM18-206ENST00000461640 ERCC6Q03468 1493 aa42.62■■■■■ 4.41
TMEM18-206ENST00000461640 NESP48681 1621 aa42.62■■■■■ 4.41
TMEM18-206ENST00000461640 CUX2O14529 1486 aa42.43■■■■■ 4.38
TMEM18-206ENST00000461640 WIZO95785 1651 aa42.41■■■■■ 4.38
TMEM18-206ENST00000461640 LAMC3Q9Y6N6 1575 aa42.31■■■■■ 4.36
TMEM18-206ENST00000461640 RSF1Q96T23 1441 aaPredicted RBP42.27■■■■■ 4.36
TMEM18-206ENST00000461640 CADPSQ9ULU8 1353 aa42.14■■■■■ 4.34
TMEM18-206ENST00000461640 PDS5BQ9NTI5 1447 aa42.1■■■■■ 4.33
TMEM18-206ENST00000461640 DNAJC5Q9H3Z4 198 aa42.05■■■■■ 4.32
TMEM18-206ENST00000461640 THOC2Q8NI27 1593 aaKnown RBP42.04■■■■■ 4.32
TMEM18-206ENST00000461640 KIF21AQ7Z4S6 1674 aa41.96■■■■■ 4.31
TMEM18-206ENST00000461640 TOP2AP11388 1531 aaKnown RBP41.91■■■■■ 4.3
TMEM18-206ENST00000461640 CFTRP13569 1480 aa41.74■■■■■ 4.27
TMEM18-206ENST00000461640 MRC2Q9UBG0 1479 aa41.7■■■■■ 4.27
TMEM18-206ENST00000461640 FANCD2Q9BXW9 1451 aa41.63■■■■■ 4.25
TMEM18-206ENST00000461640 CEP164Q9UPV0 1460 aa41.6■■■■■ 4.25
TMEM18-206ENST00000461640 WDR62O43379 1518 aa41.59■■■■■ 4.25
TMEM18-206ENST00000461640 CCDC88BA6NC98 1476 aa41.5■■■■■ 4.23
TMEM18-206ENST00000461640 URB2Q14146 1524 aaKnown RBP41.28■■■■■ 4.2
TMEM18-206ENST00000461640 PRDM2Q13029 1718 aa41.13■■■■■ 4.18
TMEM18-206ENST00000461640 TOPBP1Q92547 1522 aa40.88■■■■■ 4.14
TMEM18-206ENST00000461640 ABCC8Q09428 1581 aa40.78■■■■■ 4.12
TMEM18-206ENST00000461640 IFT140Q96RY7 1462 aa40.78■■■■■ 4.12
TMEM18-206ENST00000461640 DNMBPQ6XZF7 1577 aa40.73■■■■■ 4.11
TMEM18-206ENST00000461640 ZNF608Q9ULD9 1512 aaPredicted RBP40.72■■■■■ 4.11
TMEM18-206ENST00000461640 SUPT5HO00267 1087 aaKnown RBP40.67■■■■■ 4.1
TMEM18-206ENST00000461640 OSCARQ8IYS5 282 aa40.62■■■■■ 4.09
TMEM18-206ENST00000461640 POLA1P09884 1462 aaPredicted RBP40.51■■■■■ 4.07
TMEM18-206ENST00000461640 TARBP1Q13395 1621 aaKnown RBP40.47■■■■■ 4.07
TMEM18-206ENST00000461640 EIF4G3O43432 1585 aaKnown RBP40.42■■■■■ 4.06
TMEM18-206ENST00000461640 AQRO60306 1485 aaKnown RBP eCLIP40.41■■■■■ 4.06
TMEM18-206ENST00000461640 RAD54L2Q9Y4B4 1467 aa40.38■■■■■ 4.05
TMEM18-206ENST00000461640 SOGA1O94964 1423 aa40.34■■■■■ 4.05
TMEM18-206ENST00000461640 CUX1P39880 1505 aa40.33■■■■■ 4.05
TMEM18-206ENST00000461640 TRIM41Q8WV44 630 aa40.32■■■■■ 4.05
TMEM18-206ENST00000461640 FGD5Q6ZNL6 1462 aa40.29■■■■■ 4.04
TMEM18-206ENST00000461640 TDRD9Q8NDG6 1382 aaKnown RBP40.23■■■■■ 4.03
TMEM18-206ENST00000461640 FBLN2P98095 1184 aa40.03■■■■■ 4
TMEM18-206ENST00000461640 WDR97A6NE52 1622 aa40.02■■■■■ 4
TMEM18-206ENST00000461640 CHD1O14646 1710 aa39.98■■■■□ 3.99
TMEM18-206ENST00000461640 SNAPC4Q5SXM2 1469 aa39.96■■■■□ 3.99
TMEM18-206ENST00000461640 RIMBP3CA6NJZ7 1639 aa39.96■■■■□ 3.99
TMEM18-206ENST00000461640 RIMBP3BA6NNM3 1639 aa39.96■■■■□ 3.99
TMEM18-206ENST00000461640 RIMBP3Q9UFD9 1639 aa39.96■■■■□ 3.99
TMEM18-206ENST00000461640 ARHGEF11O15085 1522 aa39.91■■■■□ 3.98
TMEM18-206ENST00000461640 GRIN2BQ13224 1484 aa39.91■■■■□ 3.98
TMEM18-206ENST00000461640 ABCA10Q8WWZ4 1543 aa39.87■■■■□ 3.97
TMEM18-206ENST00000461640 MAGI1Q96QZ7 1491 aaPredicted RBP39.86■■■■□ 3.97
TMEM18-206ENST00000461640 GAPVD1Q14C86 1478 aa39.83■■■■□ 3.97
TMEM18-206ENST00000461640 CHMP7Q8WUX9 453 aaPredicted RBP39.82■■■■□ 3.97
TMEM18-206ENST00000461640 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.96
TMEM18-206ENST00000461640 TOP2BQ02880 1626 aa39.75■■■■□ 3.95
TMEM18-206ENST00000461640 SYNJ2O15056 1496 aa39.74■■■■□ 3.95
TMEM18-206ENST00000461640 SYNJ1O43426 1573 aa39.73■■■■□ 3.95
TMEM18-206ENST00000461640 ABCA5Q8WWZ7 1642 aa39.73■■■■□ 3.95
TMEM18-206ENST00000461640 BIVM-ERCC5R4GMW8 1640 aa39.72■■■■□ 3.95
TMEM18-206ENST00000461640 CYB5RLQ6IPT4 315 aa39.66■■■■□ 3.94
TMEM18-206ENST00000461640 PBRM1Q86U86 1689 aa39.66■■■■□ 3.94
TMEM18-206ENST00000461640 CLASP1Q7Z460 1538 aa39.65■■■■□ 3.94
TMEM18-206ENST00000461640 ARAP1Q96P48 1450 aa39.58■■■■□ 3.93
TMEM18-206ENST00000461640 GRIN2AQ12879 1464 aa39.4■■■■□ 3.9
TMEM18-206ENST00000461640 ADAMTS12P58397 1594 aa39.38■■■■□ 3.9
TMEM18-206ENST00000461640 FHAD1B1AJZ9 1412 aa39.35■■■■□ 3.89
TMEM18-206ENST00000461640 ERICH3Q5RHP9 1530 aa39.35■■■■□ 3.89
TMEM18-206ENST00000461640 NUP160Q12769 1436 aa39.29■■■■□ 3.88
TMEM18-206ENST00000461640 CEP170Q5SW79 1584 aa39.24■■■■□ 3.87
TMEM18-206ENST00000461640 ERCC6L2Q5T890 1561 aa39.08■■■■□ 3.85
TMEM18-206ENST00000461640 IGF1RP08069 1367 aa39.05■■■■□ 3.84
TMEM18-206ENST00000461640 TRHP20396 242 aaPredicted RBP39.04■■■■□ 3.84
TMEM18-206ENST00000461640 KIF27Q86VH2 1401 aa39.02■■■■□ 3.84
TMEM18-206ENST00000461640 SHROOM2Q13796 1616 aa39■■■■□ 3.83
TMEM18-206ENST00000461640 JPH4Q96JJ6 628 aa38.92■■■■□ 3.82
TMEM18-206ENST00000461640 PRG4Q92954 1404 aaPredicted RBP38.87■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms