RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
PABPC4-208ENST00000461578 ABCC9O60706 1549 aa32.06■■■□□ 2.72
PABPC4-208ENST00000461578 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
PABPC4-208ENST00000461578 DNAJC5BQ9UF47 199 aa30.42■■■□□ 2.46
PABPC4-208ENST00000461578 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
PABPC4-208ENST00000461578 NACADO15069 1562 aa29.94■■■□□ 2.38
PABPC4-208ENST00000461578 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
PABPC4-208ENST00000461578 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
PABPC4-208ENST00000461578 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
PABPC4-208ENST00000461578 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
PABPC4-208ENST00000461578 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
PABPC4-208ENST00000461578 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
PABPC4-208ENST00000461578 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
PABPC4-208ENST00000461578 CECR2Q9BXF3 1484 aa28.89■■■□□ 2.22
PABPC4-208ENST00000461578 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
PABPC4-208ENST00000461578 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
PABPC4-208ENST00000461578 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
PABPC4-208ENST00000461578 EIF4G1Q04637 1599 aaKnown RBP28.73■■■□□ 2.19
PABPC4-208ENST00000461578 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
PABPC4-208ENST00000461578 CUX2O14529 1486 aa27.72■■■□□ 2.03
PABPC4-208ENST00000461578 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
PABPC4-208ENST00000461578 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
PABPC4-208ENST00000461578 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
PABPC4-208ENST00000461578 NESP48681 1621 aa27.43■■□□□ 1.98
PABPC4-208ENST00000461578 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
PABPC4-208ENST00000461578 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
PABPC4-208ENST00000461578 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
PABPC4-208ENST00000461578 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
PABPC4-208ENST00000461578 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
PABPC4-208ENST00000461578 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
PABPC4-208ENST00000461578 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
PABPC4-208ENST00000461578 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
PABPC4-208ENST00000461578 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
PABPC4-208ENST00000461578 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
PABPC4-208ENST00000461578 PDS5BQ9NTI5 1447 aa26.97■■□□□ 1.91
PABPC4-208ENST00000461578 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
PABPC4-208ENST00000461578 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
PABPC4-208ENST00000461578 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
PABPC4-208ENST00000461578 WDR62O43379 1518 aa26.7■■□□□ 1.87
PABPC4-208ENST00000461578 WIZO95785 1651 aa26.7■■□□□ 1.86
PABPC4-208ENST00000461578 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
PABPC4-208ENST00000461578 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
PABPC4-208ENST00000461578 OSCARQ8IYS5 282 aa26.42■■□□□ 1.82
PABPC4-208ENST00000461578 CFTRP13569 1480 aa26.41■■□□□ 1.82
PABPC4-208ENST00000461578 URB2Q14146 1524 aaKnown RBP26.34■■□□□ 1.81
PABPC4-208ENST00000461578 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
PABPC4-208ENST00000461578 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
PABPC4-208ENST00000461578 RIMBP3CA6NJZ7 1639 aa26.15■■□□□ 1.78
PABPC4-208ENST00000461578 RIMBP3BA6NNM3 1639 aa26.15■■□□□ 1.78
PABPC4-208ENST00000461578 RIMBP3Q9UFD9 1639 aa26.15■■□□□ 1.78
PABPC4-208ENST00000461578 PRDM2Q13029 1718 aa26.14■■□□□ 1.77
PABPC4-208ENST00000461578 ZNF608Q9ULD9 1512 aaPredicted RBP26.11■■□□□ 1.77
PABPC4-208ENST00000461578 IFT140Q96RY7 1462 aa26.06■■□□□ 1.76
PABPC4-208ENST00000461578 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
PABPC4-208ENST00000461578 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
PABPC4-208ENST00000461578 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
PABPC4-208ENST00000461578 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
PABPC4-208ENST00000461578 CYB5RLQ6IPT4 315 aa25.87■■□□□ 1.73
PABPC4-208ENST00000461578 ABCC8Q09428 1581 aa25.84■■□□□ 1.73
PABPC4-208ENST00000461578 DNMBPQ6XZF7 1577 aa25.84■■□□□ 1.73
PABPC4-208ENST00000461578 CHD1O14646 1710 aa25.83■■□□□ 1.73
PABPC4-208ENST00000461578 AQRO60306 1485 aaKnown RBP eCLIP25.82■■□□□ 1.728e-11■■■■■ 43.3
PABPC4-208ENST00000461578 FBLN2P98095 1184 aa25.78■■□□□ 1.72
PABPC4-208ENST00000461578 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
PABPC4-208ENST00000461578 TRHP20396 242 aaPredicted RBP25.75■■□□□ 1.71
PABPC4-208ENST00000461578 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
PABPC4-208ENST00000461578 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
PABPC4-208ENST00000461578 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
PABPC4-208ENST00000461578 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
PABPC4-208ENST00000461578 SOGA1O94964 1423 aa25.57■■□□□ 1.68
PABPC4-208ENST00000461578 SNAPC4Q5SXM2 1469 aa25.54■■□□□ 1.68
PABPC4-208ENST00000461578 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
PABPC4-208ENST00000461578 CLASP1Q7Z460 1538 aa25.48■■□□□ 1.67
PABPC4-208ENST00000461578 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
PABPC4-208ENST00000461578 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
PABPC4-208ENST00000461578 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
PABPC4-208ENST00000461578 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
PABPC4-208ENST00000461578 CUX1P39880 1505 aa25.4■■□□□ 1.66
PABPC4-208ENST00000461578 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
PABPC4-208ENST00000461578 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
PABPC4-208ENST00000461578 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
PABPC4-208ENST00000461578 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
PABPC4-208ENST00000461578 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
PABPC4-208ENST00000461578 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
PABPC4-208ENST00000461578 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
PABPC4-208ENST00000461578 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
PABPC4-208ENST00000461578 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
PABPC4-208ENST00000461578 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
PABPC4-208ENST00000461578 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
PABPC4-208ENST00000461578 NUP160Q12769 1436 aa24.97■■□□□ 1.59
PABPC4-208ENST00000461578 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
PABPC4-208ENST00000461578 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
PABPC4-208ENST00000461578 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
PABPC4-208ENST00000461578 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
PABPC4-208ENST00000461578 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
PABPC4-208ENST00000461578 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
PABPC4-208ENST00000461578 KIF13AQ9H1H9 1805 aa24.84■■□□□ 1.57
PABPC4-208ENST00000461578 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
PABPC4-208ENST00000461578 PRG4Q92954 1404 aaPredicted RBP24.8■■□□□ 1.56
PABPC4-208ENST00000461578 JPH4Q96JJ6 628 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms