RNA–Protein interactions for RNA: ENST00000461533.1

ITGA9-204, Transcript of integrin subunit alpha 9, humanhuman

TSL 3

Gene ITGA9, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-204ENST00000461533 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
ITGA9-204ENST00000461533 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
ITGA9-204ENST00000461533 ABCC9O60706 1549 aa17.45■□□□□ 0.38
ITGA9-204ENST00000461533 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
ITGA9-204ENST00000461533 NACADO15069 1562 aa16.67■□□□□ 0.26
ITGA9-204ENST00000461533 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
ITGA9-204ENST00000461533 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
ITGA9-204ENST00000461533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
ITGA9-204ENST00000461533 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
ITGA9-204ENST00000461533 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
ITGA9-204ENST00000461533 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
ITGA9-204ENST00000461533 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
ITGA9-204ENST00000461533 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
ITGA9-204ENST00000461533 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
ITGA9-204ENST00000461533 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
ITGA9-204ENST00000461533 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
ITGA9-204ENST00000461533 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
ITGA9-204ENST00000461533 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
ITGA9-204ENST00000461533 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
ITGA9-204ENST00000461533 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
ITGA9-204ENST00000461533 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
ITGA9-204ENST00000461533 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
ITGA9-204ENST00000461533 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
ITGA9-204ENST00000461533 HMGXB3Q12766 1538 aa15.28■□□□□ 0.04
ITGA9-204ENST00000461533 PEG3Q9GZU2 1588 aa15.25■□□□□ 0.03
ITGA9-204ENST00000461533 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
ITGA9-204ENST00000461533 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
ITGA9-204ENST00000461533 ERCC6Q03468 1493 aa15.07■□□□□ 0
ITGA9-204ENST00000461533 CUX2O14529 1486 aa15.04■□□□□ -0
ITGA9-204ENST00000461533 NESP48681 1621 aa15.03■□□□□ -0
ITGA9-204ENST00000461533 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
ITGA9-204ENST00000461533 WIZO95785 1651 aa14.98□□□□□ -0.01
ITGA9-204ENST00000461533 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
ITGA9-204ENST00000461533 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
ITGA9-204ENST00000461533 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
ITGA9-204ENST00000461533 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
ITGA9-204ENST00000461533 DNAJC5Q9H3Z4 198 aa14.86□□□□□ -0.03
ITGA9-204ENST00000461533 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
ITGA9-204ENST00000461533 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
ITGA9-204ENST00000461533 CFTRP13569 1480 aa14.77□□□□□ -0.04
ITGA9-204ENST00000461533 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
ITGA9-204ENST00000461533 WDR62O43379 1518 aa14.73□□□□□ -0.05
ITGA9-204ENST00000461533 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
ITGA9-204ENST00000461533 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
ITGA9-204ENST00000461533 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
ITGA9-204ENST00000461533 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
ITGA9-204ENST00000461533 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.08
ITGA9-204ENST00000461533 ABCC8Q09428 1581 aa14.48□□□□□ -0.09
ITGA9-204ENST00000461533 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
ITGA9-204ENST00000461533 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
ITGA9-204ENST00000461533 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
ITGA9-204ENST00000461533 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
ITGA9-204ENST00000461533 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
ITGA9-204ENST00000461533 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
ITGA9-204ENST00000461533 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
ITGA9-204ENST00000461533 EIF4G3O43432 1585 aaKnown RBP14.3□□□□□ -0.12
ITGA9-204ENST00000461533 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
ITGA9-204ENST00000461533 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
ITGA9-204ENST00000461533 SOGA1O94964 1423 aa14.25□□□□□ -0.13
ITGA9-204ENST00000461533 CUX1P39880 1505 aa14.25□□□□□ -0.13
ITGA9-204ENST00000461533 WDR97A6NE52 1622 aa14.24□□□□□ -0.13
ITGA9-204ENST00000461533 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
ITGA9-204ENST00000461533 RAD54L2Q9Y4B4 1467 aa14.23□□□□□ -0.13
ITGA9-204ENST00000461533 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
ITGA9-204ENST00000461533 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
ITGA9-204ENST00000461533 CHD1O14646 1710 aa14.15□□□□□ -0.14
ITGA9-204ENST00000461533 GRIN2BQ13224 1484 aa14.13□□□□□ -0.15
ITGA9-204ENST00000461533 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
ITGA9-204ENST00000461533 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
ITGA9-204ENST00000461533 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
ITGA9-204ENST00000461533 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
ITGA9-204ENST00000461533 ARHGEF11O15085 1522 aa14.12□□□□□ -0.15
ITGA9-204ENST00000461533 ABCA10Q8WWZ4 1543 aa14.12□□□□□ -0.15
ITGA9-204ENST00000461533 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
ITGA9-204ENST00000461533 FBLN2P98095 1184 aa14.09□□□□□ -0.15
ITGA9-204ENST00000461533 TOP2BQ02880 1626 aa14.08□□□□□ -0.15
ITGA9-204ENST00000461533 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.15
ITGA9-204ENST00000461533 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
ITGA9-204ENST00000461533 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
ITGA9-204ENST00000461533 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
ITGA9-204ENST00000461533 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
ITGA9-204ENST00000461533 PBRM1Q86U86 1689 aa14.05□□□□□ -0.16
ITGA9-204ENST00000461533 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
ITGA9-204ENST00000461533 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
ITGA9-204ENST00000461533 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
ITGA9-204ENST00000461533 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
ITGA9-204ENST00000461533 CYB5RLQ6IPT4 315 aa13.97□□□□□ -0.17
ITGA9-204ENST00000461533 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
ITGA9-204ENST00000461533 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
ITGA9-204ENST00000461533 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
ITGA9-204ENST00000461533 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
ITGA9-204ENST00000461533 NUP160Q12769 1436 aa13.9□□□□□ -0.18
ITGA9-204ENST00000461533 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
ITGA9-204ENST00000461533 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
ITGA9-204ENST00000461533 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
ITGA9-204ENST00000461533 IGF1RP08069 1367 aa13.79□□□□□ -0.2
ITGA9-204ENST00000461533 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
ITGA9-204ENST00000461533 CUL7Q14999 1698 aa13.77□□□□□ -0.21
ITGA9-204ENST00000461533 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
ITGA9-204ENST00000461533 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms