RNA–Protein interactions for RNA: ENST00000461357.1

ITM2A-203, Transcript of integral membrane protein 2A, humanhuman

TSL 5

Gene ITM2A, Length 291 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-203ENST00000461357 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
ITM2A-203ENST00000461357 ABCC9O60706 1549 aa18.23■□□□□ 0.51
ITM2A-203ENST00000461357 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
ITM2A-203ENST00000461357 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
ITM2A-203ENST00000461357 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
ITM2A-203ENST00000461357 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
ITM2A-203ENST00000461357 NACADO15069 1562 aa16.87■□□□□ 0.29
ITM2A-203ENST00000461357 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
ITM2A-203ENST00000461357 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
ITM2A-203ENST00000461357 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
ITM2A-203ENST00000461357 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
ITM2A-203ENST00000461357 MYO15BQ96JP2 1530 aa16.49■□□□□ 0.23
ITM2A-203ENST00000461357 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
ITM2A-203ENST00000461357 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
ITM2A-203ENST00000461357 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
ITM2A-203ENST00000461357 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
ITM2A-203ENST00000461357 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
ITM2A-203ENST00000461357 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
ITM2A-203ENST00000461357 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
ITM2A-203ENST00000461357 CUX2O14529 1486 aa15.92■□□□□ 0.14
ITM2A-203ENST00000461357 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
ITM2A-203ENST00000461357 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
ITM2A-203ENST00000461357 NESP48681 1621 aa15.55■□□□□ 0.08
ITM2A-203ENST00000461357 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
ITM2A-203ENST00000461357 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
ITM2A-203ENST00000461357 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
ITM2A-203ENST00000461357 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
ITM2A-203ENST00000461357 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
ITM2A-203ENST00000461357 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
ITM2A-203ENST00000461357 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
ITM2A-203ENST00000461357 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
ITM2A-203ENST00000461357 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
ITM2A-203ENST00000461357 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.03
ITM2A-203ENST00000461357 PDS5BQ9NTI5 1447 aa15.19■□□□□ 0.02
ITM2A-203ENST00000461357 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
ITM2A-203ENST00000461357 WDR62O43379 1518 aa15.15■□□□□ 0.02
ITM2A-203ENST00000461357 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
ITM2A-203ENST00000461357 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
ITM2A-203ENST00000461357 CADPSQ9ULU8 1353 aa15.08■□□□□ 0
ITM2A-203ENST00000461357 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
ITM2A-203ENST00000461357 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
ITM2A-203ENST00000461357 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
ITM2A-203ENST00000461357 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
ITM2A-203ENST00000461357 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
ITM2A-203ENST00000461357 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
ITM2A-203ENST00000461357 ARHGEF11O15085 1522 aa14.89□□□□□ -0.03
ITM2A-203ENST00000461357 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
ITM2A-203ENST00000461357 WIZO95785 1651 aa14.83□□□□□ -0.04
ITM2A-203ENST00000461357 CFTRP13569 1480 aa14.82□□□□□ -0.04
ITM2A-203ENST00000461357 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
ITM2A-203ENST00000461357 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
ITM2A-203ENST00000461357 ARAP1Q96P48 1450 aa14.72□□□□□ -0.05
ITM2A-203ENST00000461357 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
ITM2A-203ENST00000461357 IFT140Q96RY7 1462 aa14.67□□□□□ -0.06
ITM2A-203ENST00000461357 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
ITM2A-203ENST00000461357 CHD1O14646 1710 aa14.63□□□□□ -0.07
ITM2A-203ENST00000461357 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
ITM2A-203ENST00000461357 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
ITM2A-203ENST00000461357 RSF1Q96T23 1441 aaPredicted RBP14.59□□□□□ -0.07
ITM2A-203ENST00000461357 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
ITM2A-203ENST00000461357 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
ITM2A-203ENST00000461357 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
ITM2A-203ENST00000461357 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
ITM2A-203ENST00000461357 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
ITM2A-203ENST00000461357 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
ITM2A-203ENST00000461357 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
ITM2A-203ENST00000461357 FBLN2P98095 1184 aa14.44□□□□□ -0.1
ITM2A-203ENST00000461357 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
ITM2A-203ENST00000461357 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
ITM2A-203ENST00000461357 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
ITM2A-203ENST00000461357 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
ITM2A-203ENST00000461357 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
ITM2A-203ENST00000461357 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
ITM2A-203ENST00000461357 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
ITM2A-203ENST00000461357 SOGA1O94964 1423 aa14.29□□□□□ -0.12
ITM2A-203ENST00000461357 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
ITM2A-203ENST00000461357 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
ITM2A-203ENST00000461357 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
ITM2A-203ENST00000461357 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
ITM2A-203ENST00000461357 ERCC6L2Q5T890 1561 aa14.23□□□□□ -0.13
ITM2A-203ENST00000461357 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
ITM2A-203ENST00000461357 KIF13AQ9H1H9 1805 aa14.22□□□□□ -0.13
ITM2A-203ENST00000461357 GRIN2BQ13224 1484 aa14.21□□□□□ -0.13
ITM2A-203ENST00000461357 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
ITM2A-203ENST00000461357 PBRM1Q86U86 1689 aa14.16□□□□□ -0.14
ITM2A-203ENST00000461357 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
ITM2A-203ENST00000461357 CUX1P39880 1505 aa14.14□□□□□ -0.15
ITM2A-203ENST00000461357 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
ITM2A-203ENST00000461357 SHROOM2Q13796 1616 aa14.08□□□□□ -0.15
ITM2A-203ENST00000461357 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
ITM2A-203ENST00000461357 NUP160Q12769 1436 aa14.06□□□□□ -0.16
ITM2A-203ENST00000461357 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
ITM2A-203ENST00000461357 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
ITM2A-203ENST00000461357 ABCC10Q5T3U5 1492 aa14.01□□□□□ -0.17
ITM2A-203ENST00000461357 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
ITM2A-203ENST00000461357 DIP2BQ9P265 1576 aa13.97□□□□□ -0.17
ITM2A-203ENST00000461357 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
ITM2A-203ENST00000461357 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
ITM2A-203ENST00000461357 KDM6BO15054 1643 aa13.94□□□□□ -0.18
ITM2A-203ENST00000461357 PRG4Q92954 1404 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms