RNA–Protein interactions for RNA: ENST00000461356.5

CDK5RAP1-206, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 758 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-206ENST00000461356 NISCHQ9Y2I1 1504 aa32.9■■■□□ 2.86
CDK5RAP1-206ENST00000461356 ABCC9O60706 1549 aa30.36■■■□□ 2.45
CDK5RAP1-206ENST00000461356 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
CDK5RAP1-206ENST00000461356 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
CDK5RAP1-206ENST00000461356 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
CDK5RAP1-206ENST00000461356 NACADO15069 1562 aa28.36■■■□□ 2.13
CDK5RAP1-206ENST00000461356 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.11
CDK5RAP1-206ENST00000461356 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
CDK5RAP1-206ENST00000461356 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
CDK5RAP1-206ENST00000461356 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
CDK5RAP1-206ENST00000461356 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
CDK5RAP1-206ENST00000461356 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
CDK5RAP1-206ENST00000461356 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
CDK5RAP1-206ENST00000461356 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
CDK5RAP1-206ENST00000461356 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
CDK5RAP1-206ENST00000461356 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
CDK5RAP1-206ENST00000461356 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
CDK5RAP1-206ENST00000461356 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
CDK5RAP1-206ENST00000461356 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
CDK5RAP1-206ENST00000461356 CUX2O14529 1486 aa26.49■■□□□ 1.83
CDK5RAP1-206ENST00000461356 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
CDK5RAP1-206ENST00000461356 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
CDK5RAP1-206ENST00000461356 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
CDK5RAP1-206ENST00000461356 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
CDK5RAP1-206ENST00000461356 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
CDK5RAP1-206ENST00000461356 NESP48681 1621 aa25.92■■□□□ 1.74
CDK5RAP1-206ENST00000461356 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
CDK5RAP1-206ENST00000461356 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
CDK5RAP1-206ENST00000461356 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
CDK5RAP1-206ENST00000461356 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
CDK5RAP1-206ENST00000461356 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
CDK5RAP1-206ENST00000461356 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
CDK5RAP1-206ENST00000461356 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
CDK5RAP1-206ENST00000461356 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
CDK5RAP1-206ENST00000461356 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
CDK5RAP1-206ENST00000461356 WDR62O43379 1518 aa25.37■■□□□ 1.65
CDK5RAP1-206ENST00000461356 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
CDK5RAP1-206ENST00000461356 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
CDK5RAP1-206ENST00000461356 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
CDK5RAP1-206ENST00000461356 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.61
CDK5RAP1-206ENST00000461356 WIZO95785 1651 aa25.07■■□□□ 1.6
CDK5RAP1-206ENST00000461356 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
CDK5RAP1-206ENST00000461356 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
CDK5RAP1-206ENST00000461356 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
CDK5RAP1-206ENST00000461356 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
CDK5RAP1-206ENST00000461356 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
CDK5RAP1-206ENST00000461356 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
CDK5RAP1-206ENST00000461356 CFTRP13569 1480 aa24.89■■□□□ 1.57
CDK5RAP1-206ENST00000461356 PRDM2Q13029 1718 aa24.87■■□□□ 1.57
CDK5RAP1-206ENST00000461356 ARHGEF11O15085 1522 aa24.77■■□□□ 1.56
CDK5RAP1-206ENST00000461356 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
CDK5RAP1-206ENST00000461356 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
CDK5RAP1-206ENST00000461356 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
CDK5RAP1-206ENST00000461356 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
CDK5RAP1-206ENST00000461356 CHD1O14646 1710 aa24.6■■□□□ 1.53
CDK5RAP1-206ENST00000461356 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
CDK5RAP1-206ENST00000461356 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
CDK5RAP1-206ENST00000461356 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
CDK5RAP1-206ENST00000461356 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
CDK5RAP1-206ENST00000461356 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
CDK5RAP1-206ENST00000461356 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
CDK5RAP1-206ENST00000461356 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
CDK5RAP1-206ENST00000461356 TRHP20396 242 aaPredicted RBP24.34■■□□□ 1.49
CDK5RAP1-206ENST00000461356 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
CDK5RAP1-206ENST00000461356 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.484e-7■■■■■ 27.5
CDK5RAP1-206ENST00000461356 CLASP1Q7Z460 1538 aa24.22■■□□□ 1.47
CDK5RAP1-206ENST00000461356 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
CDK5RAP1-206ENST00000461356 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
CDK5RAP1-206ENST00000461356 FBLN2P98095 1184 aa24.14■■□□□ 1.45
CDK5RAP1-206ENST00000461356 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
CDK5RAP1-206ENST00000461356 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
CDK5RAP1-206ENST00000461356 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
CDK5RAP1-206ENST00000461356 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
CDK5RAP1-206ENST00000461356 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
CDK5RAP1-206ENST00000461356 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
CDK5RAP1-206ENST00000461356 SOGA1O94964 1423 aa23.99■■□□□ 1.43
CDK5RAP1-206ENST00000461356 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
CDK5RAP1-206ENST00000461356 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
CDK5RAP1-206ENST00000461356 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
CDK5RAP1-206ENST00000461356 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
CDK5RAP1-206ENST00000461356 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
CDK5RAP1-206ENST00000461356 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
CDK5RAP1-206ENST00000461356 CUX1P39880 1505 aa23.87■■□□□ 1.41
CDK5RAP1-206ENST00000461356 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
CDK5RAP1-206ENST00000461356 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
CDK5RAP1-206ENST00000461356 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
CDK5RAP1-206ENST00000461356 CEP170Q5SW79 1584 aa23.67■■□□□ 1.38
CDK5RAP1-206ENST00000461356 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
CDK5RAP1-206ENST00000461356 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
CDK5RAP1-206ENST00000461356 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
CDK5RAP1-206ENST00000461356 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
CDK5RAP1-206ENST00000461356 NUP160Q12769 1436 aa23.59■■□□□ 1.37
CDK5RAP1-206ENST00000461356 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
CDK5RAP1-206ENST00000461356 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
CDK5RAP1-206ENST00000461356 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
CDK5RAP1-206ENST00000461356 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
CDK5RAP1-206ENST00000461356 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CDK5RAP1-206ENST00000461356 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
CDK5RAP1-206ENST00000461356 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
CDK5RAP1-206ENST00000461356 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms