RNA–Protein interactions for RNA: ENST00000461336.5

KCNIP3-204, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 2

Gene KCNIP3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-204ENST00000461336 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
KCNIP3-204ENST00000461336 ABCC9O60706 1549 aa27.72■■■□□ 2.03
KCNIP3-204ENST00000461336 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
KCNIP3-204ENST00000461336 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
KCNIP3-204ENST00000461336 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
KCNIP3-204ENST00000461336 NACADO15069 1562 aa25.69■■□□□ 1.7
KCNIP3-204ENST00000461336 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
KCNIP3-204ENST00000461336 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.68
KCNIP3-204ENST00000461336 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
KCNIP3-204ENST00000461336 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
KCNIP3-204ENST00000461336 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
KCNIP3-204ENST00000461336 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
KCNIP3-204ENST00000461336 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
KCNIP3-204ENST00000461336 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
KCNIP3-204ENST00000461336 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
KCNIP3-204ENST00000461336 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
KCNIP3-204ENST00000461336 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
KCNIP3-204ENST00000461336 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
KCNIP3-204ENST00000461336 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
KCNIP3-204ENST00000461336 CUX2O14529 1486 aa24.19■■□□□ 1.46
KCNIP3-204ENST00000461336 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
KCNIP3-204ENST00000461336 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
KCNIP3-204ENST00000461336 NESP48681 1621 aa23.63■■□□□ 1.37
KCNIP3-204ENST00000461336 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
KCNIP3-204ENST00000461336 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
KCNIP3-204ENST00000461336 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
KCNIP3-204ENST00000461336 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
KCNIP3-204ENST00000461336 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
KCNIP3-204ENST00000461336 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
KCNIP3-204ENST00000461336 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
KCNIP3-204ENST00000461336 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
KCNIP3-204ENST00000461336 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
KCNIP3-204ENST00000461336 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
KCNIP3-204ENST00000461336 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
KCNIP3-204ENST00000461336 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
KCNIP3-204ENST00000461336 WDR62O43379 1518 aa23.06■■□□□ 1.28
KCNIP3-204ENST00000461336 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
KCNIP3-204ENST00000461336 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
KCNIP3-204ENST00000461336 CADPSQ9ULU8 1353 aa22.96■■□□□ 1.27
KCNIP3-204ENST00000461336 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
KCNIP3-204ENST00000461336 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
KCNIP3-204ENST00000461336 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
KCNIP3-204ENST00000461336 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
KCNIP3-204ENST00000461336 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
KCNIP3-204ENST00000461336 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
KCNIP3-204ENST00000461336 WIZO95785 1651 aa22.71■■□□□ 1.23
KCNIP3-204ENST00000461336 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
KCNIP3-204ENST00000461336 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
KCNIP3-204ENST00000461336 CFTRP13569 1480 aa22.58■■□□□ 1.2
KCNIP3-204ENST00000461336 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
KCNIP3-204ENST00000461336 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
KCNIP3-204ENST00000461336 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
KCNIP3-204ENST00000461336 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
KCNIP3-204ENST00000461336 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
KCNIP3-204ENST00000461336 IFT140Q96RY7 1462 aa22.36■■□□□ 1.17
KCNIP3-204ENST00000461336 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
KCNIP3-204ENST00000461336 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
KCNIP3-204ENST00000461336 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
KCNIP3-204ENST00000461336 CHD1O14646 1710 aa22.25■■□□□ 1.15
KCNIP3-204ENST00000461336 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
KCNIP3-204ENST00000461336 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
KCNIP3-204ENST00000461336 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
KCNIP3-204ENST00000461336 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.13
KCNIP3-204ENST00000461336 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
KCNIP3-204ENST00000461336 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
KCNIP3-204ENST00000461336 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
KCNIP3-204ENST00000461336 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
KCNIP3-204ENST00000461336 FBLN2P98095 1184 aa22.01■■□□□ 1.11
KCNIP3-204ENST00000461336 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
KCNIP3-204ENST00000461336 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
KCNIP3-204ENST00000461336 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
KCNIP3-204ENST00000461336 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
KCNIP3-204ENST00000461336 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
KCNIP3-204ENST00000461336 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
KCNIP3-204ENST00000461336 SOGA1O94964 1423 aa21.78■■□□□ 1.08
KCNIP3-204ENST00000461336 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.08
KCNIP3-204ENST00000461336 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.08
KCNIP3-204ENST00000461336 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
KCNIP3-204ENST00000461336 SYNJ2O15056 1496 aa21.72■■□□□ 1.07
KCNIP3-204ENST00000461336 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
KCNIP3-204ENST00000461336 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
KCNIP3-204ENST00000461336 CUX1P39880 1505 aa21.64■■□□□ 1.05
KCNIP3-204ENST00000461336 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
KCNIP3-204ENST00000461336 PBRM1Q86U86 1689 aa21.59■■□□□ 1.05
KCNIP3-204ENST00000461336 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
KCNIP3-204ENST00000461336 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
KCNIP3-204ENST00000461336 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
KCNIP3-204ENST00000461336 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
KCNIP3-204ENST00000461336 ILDR1Q86SU0 546 aaPredicted RBP21.46■■□□□ 1.03
KCNIP3-204ENST00000461336 GRIN2AQ12879 1464 aa21.44■■□□□ 1.02
KCNIP3-204ENST00000461336 NUP160Q12769 1436 aa21.42■■□□□ 1.02
KCNIP3-204ENST00000461336 SHROOM2Q13796 1616 aa21.42■■□□□ 1.02
KCNIP3-204ENST00000461336 KDM4FA0A1W2PPD8 638 aa21.37■■□□□ 1.01
KCNIP3-204ENST00000461336 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
KCNIP3-204ENST00000461336 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
KCNIP3-204ENST00000461336 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
KCNIP3-204ENST00000461336 ABCC10Q5T3U5 1492 aa21.31■■□□□ 1
KCNIP3-204ENST00000461336 TOP2BQ02880 1626 aa21.28■■□□□ 1
KCNIP3-204ENST00000461336 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
KCNIP3-204ENST00000461336 DIP2BQ9P265 1576 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms