RNA–Protein interactions for RNA: ENST00000461331.5

SSPO-202, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 419 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-202ENST00000461331 NISCHQ9Y2I1 1504 aa43.91■■■■■ 4.62
SSPO-202ENST00000461331 CCDC180Q9P1Z9 1646 aa39.08■■■■□ 3.85
SSPO-202ENST00000461331 ABCC9O60706 1549 aa38.89■■■■□ 3.82
SSPO-202ENST00000461331 RB1CC1Q8TDY2 1594 aa37.08■■■■□ 3.53
SSPO-202ENST00000461331 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
SSPO-202ENST00000461331 NACADO15069 1562 aa36.93■■■■□ 3.5
SSPO-202ENST00000461331 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
SSPO-202ENST00000461331 ZCCHC6Q5VYS8 1495 aaKnown RBP36.46■■■■□ 3.43
SSPO-202ENST00000461331 PABPN1Q86U42 306 aaKnown RBP eCLIP36.36■■■■□ 3.41
SSPO-202ENST00000461331 DNAJC5BQ9UF47 199 aa36.26■■■■□ 3.4
SSPO-202ENST00000461331 DCAF1Q9Y4B6 1507 aa36.24■■■■□ 3.39
SSPO-202ENST00000461331 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.38
SSPO-202ENST00000461331 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
SSPO-202ENST00000461331 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
SSPO-202ENST00000461331 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
SSPO-202ENST00000461331 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
SSPO-202ENST00000461331 CC2D2AQ9P2K1 1620 aa35.07■■■■□ 3.21
SSPO-202ENST00000461331 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
SSPO-202ENST00000461331 NCAPD3P42695 1498 aa34.16■■■■□ 3.06
SSPO-202ENST00000461331 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
SSPO-202ENST00000461331 SMARCA4P51532 1647 aa34.12■■■■□ 3.05
SSPO-202ENST00000461331 BAZ1AQ9NRL2 1556 aaPredicted RBP34.01■■■■□ 3.03
SSPO-202ENST00000461331 SMARCA2P51531 1590 aa33.96■■■■□ 3.03
SSPO-202ENST00000461331 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
SSPO-202ENST00000461331 HMGXB3Q12766 1538 aa33.85■■■■□ 3.01
SSPO-202ENST00000461331 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
SSPO-202ENST00000461331 BAZ1BQ9UIG0 1483 aaKnown RBP33.77■■■■□ 3
SSPO-202ENST00000461331 NESP48681 1621 aa33.54■■■□□ 2.96
SSPO-202ENST00000461331 ERCC6Q03468 1493 aa33.49■■■□□ 2.95
SSPO-202ENST00000461331 WIZO95785 1651 aa33.45■■■□□ 2.94
SSPO-202ENST00000461331 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
SSPO-202ENST00000461331 CUX2O14529 1486 aa33.25■■■□□ 2.91
SSPO-202ENST00000461331 LAMC3Q9Y6N6 1575 aa33.24■■■□□ 2.91
SSPO-202ENST00000461331 CADPSQ9ULU8 1353 aa33.16■■■□□ 2.9
SSPO-202ENST00000461331 PDS5BQ9NTI5 1447 aa33.1■■■□□ 2.89
SSPO-202ENST00000461331 TOP2AP11388 1531 aaKnown RBP33.03■■■□□ 2.88
SSPO-202ENST00000461331 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
SSPO-202ENST00000461331 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
SSPO-202ENST00000461331 DNAJC5Q9H3Z4 198 aa32.93■■■□□ 2.86
SSPO-202ENST00000461331 SUPT5HO00267 1087 aaKnown RBP32.91■■■□□ 2.86
SSPO-202ENST00000461331 CFTRP13569 1480 aa32.85■■■□□ 2.85
SSPO-202ENST00000461331 MRC2Q9UBG0 1479 aa32.78■■■□□ 2.84
SSPO-202ENST00000461331 FANCD2Q9BXW9 1451 aa32.76■■■□□ 2.84
SSPO-202ENST00000461331 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
SSPO-202ENST00000461331 CEP164Q9UPV0 1460 aa32.72■■■□□ 2.83
SSPO-202ENST00000461331 WDR62O43379 1518 aa32.66■■■□□ 2.82
SSPO-202ENST00000461331 URB2Q14146 1524 aaKnown RBP32.48■■■□□ 2.79
SSPO-202ENST00000461331 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
SSPO-202ENST00000461331 TOPBP1Q92547 1522 aa32.17■■■□□ 2.74
SSPO-202ENST00000461331 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
SSPO-202ENST00000461331 IFT140Q96RY7 1462 aa32.06■■■□□ 2.72
SSPO-202ENST00000461331 DNMBPQ6XZF7 1577 aa32.04■■■□□ 2.72
SSPO-202ENST00000461331 ZNF608Q9ULD9 1512 aaPredicted RBP32.04■■■□□ 2.72
SSPO-202ENST00000461331 OSCARQ8IYS5 282 aa31.93■■■□□ 2.7
SSPO-202ENST00000461331 POLA1P09884 1462 aaPredicted RBP31.88■■■□□ 2.69
SSPO-202ENST00000461331 TARBP1Q13395 1621 aaKnown RBP31.84■■■□□ 2.69
SSPO-202ENST00000461331 AQRO60306 1485 aaKnown RBP eCLIP31.82■■■□□ 2.68
SSPO-202ENST00000461331 RAD54L2Q9Y4B4 1467 aa31.81■■■□□ 2.68
SSPO-202ENST00000461331 SOGA1O94964 1423 aa31.78■■■□□ 2.68
SSPO-202ENST00000461331 CUX1P39880 1505 aa31.78■■■□□ 2.68
SSPO-202ENST00000461331 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
SSPO-202ENST00000461331 FGD5Q6ZNL6 1462 aa31.74■■■□□ 2.67
SSPO-202ENST00000461331 TDRD9Q8NDG6 1382 aaKnown RBP31.7■■■□□ 2.67
SSPO-202ENST00000461331 TRIM41Q8WV44 630 aa31.66■■■□□ 2.66
SSPO-202ENST00000461331 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.64
SSPO-202ENST00000461331 FBLN2P98095 1184 aa31.55■■■□□ 2.64
SSPO-202ENST00000461331 SNAPC4Q5SXM2 1469 aa31.44■■■□□ 2.62
SSPO-202ENST00000461331 CHD1O14646 1710 aa31.44■■■□□ 2.62
SSPO-202ENST00000461331 WDR97A6NE52 1622 aa31.43■■■□□ 2.62
SSPO-202ENST00000461331 TOP2BQ02880 1626 aa31.43■■■□□ 2.62
SSPO-202ENST00000461331 BIVM-ERCC5R4GMW8 1640 aa31.42■■■□□ 2.62
SSPO-202ENST00000461331 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
SSPO-202ENST00000461331 ABCA10Q8WWZ4 1543 aa31.38■■■□□ 2.61
SSPO-202ENST00000461331 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
SSPO-202ENST00000461331 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
SSPO-202ENST00000461331 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
SSPO-202ENST00000461331 GAPVD1Q14C86 1478 aa31.36■■■□□ 2.61
SSPO-202ENST00000461331 CHMP7Q8WUX9 453 aaPredicted RBP31.36■■■□□ 2.61
SSPO-202ENST00000461331 SYNJ1O43426 1573 aa31.35■■■□□ 2.61
SSPO-202ENST00000461331 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
SSPO-202ENST00000461331 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
SSPO-202ENST00000461331 ABCA5Q8WWZ7 1642 aa31.25■■■□□ 2.59
SSPO-202ENST00000461331 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
SSPO-202ENST00000461331 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
SSPO-202ENST00000461331 CYB5RLQ6IPT4 315 aa31.19■■■□□ 2.58
SSPO-202ENST00000461331 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.58
SSPO-202ENST00000461331 ARAP1Q96P48 1450 aa31.08■■■□□ 2.57
SSPO-202ENST00000461331 GRIN2AQ12879 1464 aa31■■■□□ 2.55
SSPO-202ENST00000461331 ADAMTS12P58397 1594 aa30.99■■■□□ 2.55
SSPO-202ENST00000461331 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
SSPO-202ENST00000461331 ERICH3Q5RHP9 1530 aa30.96■■■□□ 2.55
SSPO-202ENST00000461331 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
SSPO-202ENST00000461331 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
SSPO-202ENST00000461331 NUP160Q12769 1436 aa30.9■■■□□ 2.54
SSPO-202ENST00000461331 CEP170Q5SW79 1584 aa30.87■■■□□ 2.53
SSPO-202ENST00000461331 IGF1RP08069 1367 aa30.79■■■□□ 2.52
SSPO-202ENST00000461331 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
SSPO-202ENST00000461331 EEA1Q15075 1411 aa30.68■■■□□ 2.5
SSPO-202ENST00000461331 TRHP20396 242 aaPredicted RBP30.68■■■□□ 2.5
SSPO-202ENST00000461331 CUL7Q14999 1698 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms