RNA–Protein interactions for RNA: ENST00000461306.1

ITGB5-203, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-203ENST00000461306 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
ITGB5-203ENST00000461306 ABCC9O60706 1549 aa24.99■■□□□ 1.59
ITGB5-203ENST00000461306 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
ITGB5-203ENST00000461306 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
ITGB5-203ENST00000461306 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
ITGB5-203ENST00000461306 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
ITGB5-203ENST00000461306 NACADO15069 1562 aa23.32■■□□□ 1.32
ITGB5-203ENST00000461306 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
ITGB5-203ENST00000461306 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
ITGB5-203ENST00000461306 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
ITGB5-203ENST00000461306 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
ITGB5-203ENST00000461306 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
ITGB5-203ENST00000461306 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
ITGB5-203ENST00000461306 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
ITGB5-203ENST00000461306 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
ITGB5-203ENST00000461306 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
ITGB5-203ENST00000461306 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
ITGB5-203ENST00000461306 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
ITGB5-203ENST00000461306 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
ITGB5-203ENST00000461306 CUX2O14529 1486 aa21.62■■□□□ 1.05
ITGB5-203ENST00000461306 ERCC6Q03468 1493 aa21.58■■□□□ 1.05
ITGB5-203ENST00000461306 NCAPD3P42695 1498 aa21.56■■□□□ 1.04
ITGB5-203ENST00000461306 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
ITGB5-203ENST00000461306 NESP48681 1621 aa21.39■■□□□ 1.01
ITGB5-203ENST00000461306 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
ITGB5-203ENST00000461306 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
ITGB5-203ENST00000461306 HMGXB3Q12766 1538 aa21.32■■□□□ 1
ITGB5-203ENST00000461306 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
ITGB5-203ENST00000461306 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
ITGB5-203ENST00000461306 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
ITGB5-203ENST00000461306 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
ITGB5-203ENST00000461306 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
ITGB5-203ENST00000461306 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
ITGB5-203ENST00000461306 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
ITGB5-203ENST00000461306 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
ITGB5-203ENST00000461306 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
ITGB5-203ENST00000461306 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
ITGB5-203ENST00000461306 WIZO95785 1651 aa20.86■□□□□ 0.93
ITGB5-203ENST00000461306 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
ITGB5-203ENST00000461306 WDR62O43379 1518 aa20.78■□□□□ 0.92
ITGB5-203ENST00000461306 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
ITGB5-203ENST00000461306 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
ITGB5-203ENST00000461306 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
ITGB5-203ENST00000461306 CFTRP13569 1480 aa20.61■□□□□ 0.89
ITGB5-203ENST00000461306 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
ITGB5-203ENST00000461306 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
ITGB5-203ENST00000461306 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
ITGB5-203ENST00000461306 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
ITGB5-203ENST00000461306 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
ITGB5-203ENST00000461306 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
ITGB5-203ENST00000461306 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
ITGB5-203ENST00000461306 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
ITGB5-203ENST00000461306 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
ITGB5-203ENST00000461306 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
ITGB5-203ENST00000461306 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
ITGB5-203ENST00000461306 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
ITGB5-203ENST00000461306 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
ITGB5-203ENST00000461306 FBLN2P98095 1184 aa20.21■□□□□ 0.83
ITGB5-203ENST00000461306 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■□□□ 11.9
ITGB5-203ENST00000461306 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
ITGB5-203ENST00000461306 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
ITGB5-203ENST00000461306 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
ITGB5-203ENST00000461306 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
ITGB5-203ENST00000461306 CHD1O14646 1710 aa20.08■□□□□ 0.81
ITGB5-203ENST00000461306 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
ITGB5-203ENST00000461306 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
ITGB5-203ENST00000461306 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
ITGB5-203ENST00000461306 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
ITGB5-203ENST00000461306 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
ITGB5-203ENST00000461306 SOGA1O94964 1423 aa20.01■□□□□ 0.79
ITGB5-203ENST00000461306 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
ITGB5-203ENST00000461306 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
ITGB5-203ENST00000461306 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
ITGB5-203ENST00000461306 CUX1P39880 1505 aa19.83■□□□□ 0.77
ITGB5-203ENST00000461306 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
ITGB5-203ENST00000461306 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
ITGB5-203ENST00000461306 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
ITGB5-203ENST00000461306 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
ITGB5-203ENST00000461306 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
ITGB5-203ENST00000461306 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
ITGB5-203ENST00000461306 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
ITGB5-203ENST00000461306 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
ITGB5-203ENST00000461306 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
ITGB5-203ENST00000461306 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
ITGB5-203ENST00000461306 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
ITGB5-203ENST00000461306 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
ITGB5-203ENST00000461306 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
ITGB5-203ENST00000461306 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
ITGB5-203ENST00000461306 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
ITGB5-203ENST00000461306 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
ITGB5-203ENST00000461306 NUP160Q12769 1436 aa19.46■□□□□ 0.71
ITGB5-203ENST00000461306 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
ITGB5-203ENST00000461306 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
ITGB5-203ENST00000461306 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
ITGB5-203ENST00000461306 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
ITGB5-203ENST00000461306 PRG4Q92954 1404 aaPredicted RBP19.39■□□□□ 0.69
ITGB5-203ENST00000461306 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
ITGB5-203ENST00000461306 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
ITGB5-203ENST00000461306 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
ITGB5-203ENST00000461306 KIF13AQ9H1H9 1805 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms