RNA–Protein interactions for RNA: ENST00000461299.5

VEPH1-204, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 3

Gene VEPH1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-204ENST00000461299 NISCHQ9Y2I1 1504 aa39.58■■■■□ 3.93
VEPH1-204ENST00000461299 CCDC180Q9P1Z9 1646 aa35.35■■■■□ 3.25
VEPH1-204ENST00000461299 ABCC9O60706 1549 aa34.72■■■■□ 3.15
VEPH1-204ENST00000461299 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
VEPH1-204ENST00000461299 NACADO15069 1562 aa33.26■■■□□ 2.92
VEPH1-204ENST00000461299 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
VEPH1-204ENST00000461299 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
VEPH1-204ENST00000461299 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
VEPH1-204ENST00000461299 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
VEPH1-204ENST00000461299 UNC13AQ9UPW8 1703 aa32.61■■■□□ 2.81
VEPH1-204ENST00000461299 PABPN1Q86U42 306 aaKnown RBP eCLIP32.36■■■□□ 2.77
VEPH1-204ENST00000461299 BICRAQ9NZM4 1560 aa32.33■■■□□ 2.77
VEPH1-204ENST00000461299 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
VEPH1-204ENST00000461299 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
VEPH1-204ENST00000461299 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
VEPH1-204ENST00000461299 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
VEPH1-204ENST00000461299 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
VEPH1-204ENST00000461299 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
VEPH1-204ENST00000461299 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
VEPH1-204ENST00000461299 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
VEPH1-204ENST00000461299 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
VEPH1-204ENST00000461299 ATAD2BQ9ULI0 1458 aa30.64■■■□□ 2.5
VEPH1-204ENST00000461299 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
VEPH1-204ENST00000461299 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
VEPH1-204ENST00000461299 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
VEPH1-204ENST00000461299 MROH2BQ7Z745 1585 aa30.48■■■□□ 2.47
VEPH1-204ENST00000461299 BAZ1BQ9UIG0 1483 aaKnown RBP30.4■■■□□ 2.46
VEPH1-204ENST00000461299 WIZO95785 1651 aa30.16■■■□□ 2.42
VEPH1-204ENST00000461299 RSF1Q96T23 1441 aaPredicted RBP30.04■■■□□ 2.4
VEPH1-204ENST00000461299 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
VEPH1-204ENST00000461299 NESP48681 1621 aa29.98■■■□□ 2.39
VEPH1-204ENST00000461299 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
VEPH1-204ENST00000461299 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
VEPH1-204ENST00000461299 CUX2O14529 1486 aa29.78■■■□□ 2.36
VEPH1-204ENST00000461299 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
VEPH1-204ENST00000461299 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
VEPH1-204ENST00000461299 KIF21AQ7Z4S6 1674 aa29.67■■■□□ 2.34
VEPH1-204ENST00000461299 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.33
VEPH1-204ENST00000461299 CFTRP13569 1480 aa29.54■■■□□ 2.32
VEPH1-204ENST00000461299 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.31
VEPH1-204ENST00000461299 MRC2Q9UBG0 1479 aa29.43■■■□□ 2.3
VEPH1-204ENST00000461299 CEP164Q9UPV0 1460 aa29.43■■■□□ 2.3
VEPH1-204ENST00000461299 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
VEPH1-204ENST00000461299 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
VEPH1-204ENST00000461299 WDR62O43379 1518 aa29.35■■■□□ 2.29
VEPH1-204ENST00000461299 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.25
VEPH1-204ENST00000461299 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
VEPH1-204ENST00000461299 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
VEPH1-204ENST00000461299 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
VEPH1-204ENST00000461299 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
VEPH1-204ENST00000461299 DNMBPQ6XZF7 1577 aa28.9■■■□□ 2.22
VEPH1-204ENST00000461299 IFT140Q96RY7 1462 aa28.81■■■□□ 2.2
VEPH1-204ENST00000461299 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
VEPH1-204ENST00000461299 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
VEPH1-204ENST00000461299 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
VEPH1-204ENST00000461299 CUX1P39880 1505 aa28.63■■■□□ 2.17
VEPH1-204ENST00000461299 EIF4G3O43432 1585 aaKnown RBP28.61■■■□□ 2.17
VEPH1-204ENST00000461299 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
VEPH1-204ENST00000461299 SOGA1O94964 1423 aa28.52■■■□□ 2.16
VEPH1-204ENST00000461299 RAD54L2Q9Y4B4 1467 aa28.51■■■□□ 2.15
VEPH1-204ENST00000461299 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
VEPH1-204ENST00000461299 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.15
VEPH1-204ENST00000461299 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
VEPH1-204ENST00000461299 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
VEPH1-204ENST00000461299 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
VEPH1-204ENST00000461299 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
VEPH1-204ENST00000461299 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
VEPH1-204ENST00000461299 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
VEPH1-204ENST00000461299 CHD1O14646 1710 aa28.29■■■□□ 2.12
VEPH1-204ENST00000461299 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
VEPH1-204ENST00000461299 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
VEPH1-204ENST00000461299 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
VEPH1-204ENST00000461299 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
VEPH1-204ENST00000461299 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
VEPH1-204ENST00000461299 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
VEPH1-204ENST00000461299 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
VEPH1-204ENST00000461299 FBLN2P98095 1184 aa28.15■■■□□ 2.1
VEPH1-204ENST00000461299 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
VEPH1-204ENST00000461299 RIMBP3CA6NJZ7 1639 aa28.06■■■□□ 2.08
VEPH1-204ENST00000461299 RIMBP3BA6NNM3 1639 aa28.06■■■□□ 2.08
VEPH1-204ENST00000461299 RIMBP3Q9UFD9 1639 aa28.06■■■□□ 2.08
VEPH1-204ENST00000461299 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
VEPH1-204ENST00000461299 ARHGEF11O15085 1522 aa28.02■■■□□ 2.08
VEPH1-204ENST00000461299 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
VEPH1-204ENST00000461299 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
VEPH1-204ENST00000461299 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
VEPH1-204ENST00000461299 ERICH3Q5RHP9 1530 aa27.96■■■□□ 2.07
VEPH1-204ENST00000461299 GRIN2AQ12879 1464 aa27.89■■■□□ 2.05
VEPH1-204ENST00000461299 FHAD1B1AJZ9 1412 aa27.88■■■□□ 2.05
VEPH1-204ENST00000461299 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
VEPH1-204ENST00000461299 NUP160Q12769 1436 aa27.77■■■□□ 2.04
VEPH1-204ENST00000461299 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
VEPH1-204ENST00000461299 CEP170Q5SW79 1584 aa27.76■■■□□ 2.03
VEPH1-204ENST00000461299 CYB5RLQ6IPT4 315 aa27.7■■■□□ 2.02
VEPH1-204ENST00000461299 CUL7Q14999 1698 aa27.68■■■□□ 2.02
VEPH1-204ENST00000461299 IGF1RP08069 1367 aa27.65■■■□□ 2.02
VEPH1-204ENST00000461299 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
VEPH1-204ENST00000461299 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
VEPH1-204ENST00000461299 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
VEPH1-204ENST00000461299 CARMIL1Q5VZK9 1371 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms