RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
DNMT3A-207ENST00000461228 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
DNMT3A-207ENST00000461228 ABCC9O60706 1549 aa33.48■■■□□ 2.95
DNMT3A-207ENST00000461228 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
DNMT3A-207ENST00000461228 NACADO15069 1562 aa31.87■■■□□ 2.69
DNMT3A-207ENST00000461228 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
DNMT3A-207ENST00000461228 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
DNMT3A-207ENST00000461228 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
DNMT3A-207ENST00000461228 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
DNMT3A-207ENST00000461228 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
DNMT3A-207ENST00000461228 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
DNMT3A-207ENST00000461228 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
DNMT3A-207ENST00000461228 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
DNMT3A-207ENST00000461228 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
DNMT3A-207ENST00000461228 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
DNMT3A-207ENST00000461228 CC2D2AQ9P2K1 1620 aa30.42■■■□□ 2.46
DNMT3A-207ENST00000461228 EIF4G1Q04637 1599 aaKnown RBP30.37■■■□□ 2.45
DNMT3A-207ENST00000461228 CECR2Q9BXF3 1484 aa30.28■■■□□ 2.44
DNMT3A-207ENST00000461228 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
DNMT3A-207ENST00000461228 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
DNMT3A-207ENST00000461228 CUX2O14529 1486 aa29.23■■■□□ 2.27
DNMT3A-207ENST00000461228 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
DNMT3A-207ENST00000461228 SMARCA4P51532 1647 aa29.18■■■□□ 2.26
DNMT3A-207ENST00000461228 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
DNMT3A-207ENST00000461228 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
DNMT3A-207ENST00000461228 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
DNMT3A-207ENST00000461228 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
DNMT3A-207ENST00000461228 ERCC6Q03468 1493 aa28.99■■■□□ 2.23
DNMT3A-207ENST00000461228 BAZ1BQ9UIG0 1483 aaKnown RBP28.86■■■□□ 2.21
DNMT3A-207ENST00000461228 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
DNMT3A-207ENST00000461228 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
DNMT3A-207ENST00000461228 NESP48681 1621 aa28.71■■■□□ 2.19
DNMT3A-207ENST00000461228 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
DNMT3A-207ENST00000461228 KIF21AQ7Z4S6 1674 aa28.56■■■□□ 2.16
DNMT3A-207ENST00000461228 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
DNMT3A-207ENST00000461228 WDR62O43379 1518 aa28.33■■■□□ 2.13
DNMT3A-207ENST00000461228 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
DNMT3A-207ENST00000461228 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
DNMT3A-207ENST00000461228 WIZO95785 1651 aa28.28■■■□□ 2.12
DNMT3A-207ENST00000461228 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
DNMT3A-207ENST00000461228 CFTRP13569 1480 aa28.07■■■□□ 2.08
DNMT3A-207ENST00000461228 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
DNMT3A-207ENST00000461228 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
DNMT3A-207ENST00000461228 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
DNMT3A-207ENST00000461228 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
DNMT3A-207ENST00000461228 URB2Q14146 1524 aaKnown RBP27.81■■■□□ 2.04
DNMT3A-207ENST00000461228 IFT140Q96RY7 1462 aa27.59■■■□□ 2.01
DNMT3A-207ENST00000461228 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
DNMT3A-207ENST00000461228 ABCC8Q09428 1581 aa27.55■■■□□ 2
DNMT3A-207ENST00000461228 OSCARQ8IYS5 282 aa27.51■■□□□ 1.99
DNMT3A-207ENST00000461228 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
DNMT3A-207ENST00000461228 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
DNMT3A-207ENST00000461228 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
DNMT3A-207ENST00000461228 EIF4G3O43432 1585 aaKnown RBP27.46■■□□□ 1.99
DNMT3A-207ENST00000461228 RIMBP3CA6NJZ7 1639 aa27.41■■□□□ 1.98
DNMT3A-207ENST00000461228 RIMBP3BA6NNM3 1639 aa27.41■■□□□ 1.98
DNMT3A-207ENST00000461228 RIMBP3Q9UFD9 1639 aa27.41■■□□□ 1.98
DNMT3A-207ENST00000461228 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
DNMT3A-207ENST00000461228 TARBP1Q13395 1621 aaKnown RBP27.37■■□□□ 1.97
DNMT3A-207ENST00000461228 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
DNMT3A-207ENST00000461228 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
DNMT3A-207ENST00000461228 CHD1O14646 1710 aa27.26■■□□□ 1.95
DNMT3A-207ENST00000461228 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
DNMT3A-207ENST00000461228 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.929e-8■■■■■ 30.5
DNMT3A-207ENST00000461228 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
DNMT3A-207ENST00000461228 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
DNMT3A-207ENST00000461228 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
DNMT3A-207ENST00000461228 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
DNMT3A-207ENST00000461228 CUX1P39880 1505 aa26.95■■□□□ 1.9
DNMT3A-207ENST00000461228 SOGA1O94964 1423 aa26.94■■□□□ 1.9
DNMT3A-207ENST00000461228 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
DNMT3A-207ENST00000461228 SYNJ1O43426 1573 aa26.93■■□□□ 1.9
DNMT3A-207ENST00000461228 SNAPC4Q5SXM2 1469 aa26.92■■□□□ 1.9
DNMT3A-207ENST00000461228 PBRM1Q86U86 1689 aa26.89■■□□□ 1.89
DNMT3A-207ENST00000461228 GRIN2BQ13224 1484 aa26.87■■□□□ 1.89
DNMT3A-207ENST00000461228 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
DNMT3A-207ENST00000461228 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
DNMT3A-207ENST00000461228 TDRD9Q8NDG6 1382 aaKnown RBP26.82■■□□□ 1.88
DNMT3A-207ENST00000461228 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
DNMT3A-207ENST00000461228 CYB5RLQ6IPT4 315 aa26.74■■□□□ 1.87
DNMT3A-207ENST00000461228 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
DNMT3A-207ENST00000461228 FBLN2P98095 1184 aa26.69■■□□□ 1.86
DNMT3A-207ENST00000461228 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
DNMT3A-207ENST00000461228 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
DNMT3A-207ENST00000461228 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
DNMT3A-207ENST00000461228 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
DNMT3A-207ENST00000461228 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
DNMT3A-207ENST00000461228 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
DNMT3A-207ENST00000461228 SHROOM2Q13796 1616 aa26.52■■□□□ 1.84
DNMT3A-207ENST00000461228 NUP160Q12769 1436 aa26.51■■□□□ 1.83
DNMT3A-207ENST00000461228 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
DNMT3A-207ENST00000461228 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
DNMT3A-207ENST00000461228 TRHP20396 242 aaPredicted RBP26.45■■□□□ 1.82
DNMT3A-207ENST00000461228 FHAD1B1AJZ9 1412 aa26.4■■□□□ 1.82
DNMT3A-207ENST00000461228 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
DNMT3A-207ENST00000461228 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
DNMT3A-207ENST00000461228 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
DNMT3A-207ENST00000461228 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
DNMT3A-207ENST00000461228 CUL7Q14999 1698 aa26.12■■□□□ 1.77
DNMT3A-207ENST00000461228 MAPKBP1O60336 1514 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms