RNA–Protein interactions for RNA: ENST00000461203.5

C5orf56-205, Transcript of chromosome 5 open reading frame 56, humanhuman

TSL 2

Gene C5orf56, Length 521 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-205ENST00000461203 NISCHQ9Y2I1 1504 aa49.64■■■■■ 5.54
C5orf56-205ENST00000461203 CCDC180Q9P1Z9 1646 aa44.59■■■■■ 4.73
C5orf56-205ENST00000461203 ABCC9O60706 1549 aa44.57■■■■■ 4.73
C5orf56-205ENST00000461203 RB1CC1Q8TDY2 1594 aa42.5■■■■■ 4.39
C5orf56-205ENST00000461203 NACADO15069 1562 aa42.2■■■■■ 4.35
C5orf56-205ENST00000461203 DCAF8L2P0C7V8 631 aa42.01■■■■■ 4.32
C5orf56-205ENST00000461203 DNAJC5BQ9UF47 199 aa41.69■■■■■ 4.26
C5orf56-205ENST00000461203 MYO15BQ96JP2 1530 aa41.61■■■■■ 4.25
C5orf56-205ENST00000461203 PABPN1Q86U42 306 aaKnown RBP eCLIP41.49■■■■■ 4.23
C5orf56-205ENST00000461203 UNC13AQ9UPW8 1703 aa41.35■■■■■ 4.21
C5orf56-205ENST00000461203 ZCCHC6Q5VYS8 1495 aaKnown RBP41.12■■■■■ 4.17
C5orf56-205ENST00000461203 BICRAQ9NZM4 1560 aa41.09■■■■■ 4.17
C5orf56-205ENST00000461203 DCAF1Q9Y4B6 1507 aa41.04■■■■■ 4.16
C5orf56-205ENST00000461203 SHROOM4Q9ULL8 1493 aa40.77■■■■■ 4.12
C5orf56-205ENST00000461203 SCRIBQ14160 1630 aa40.58■■■■■ 4.09
C5orf56-205ENST00000461203 CC2D2AQ9P2K1 1620 aa40.25■■■■■ 4.03
C5orf56-205ENST00000461203 CECR2Q9BXF3 1484 aa40.19■■■■■ 4.03
C5orf56-205ENST00000461203 EIF4G1Q04637 1599 aaKnown RBP40.18■■■■■ 4.02
C5orf56-205ENST00000461203 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
C5orf56-205ENST00000461203 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
C5orf56-205ENST00000461203 SMARCA2P51531 1590 aa38.75■■■■□ 3.79
C5orf56-205ENST00000461203 SMARCA4P51532 1647 aa38.72■■■■□ 3.79
C5orf56-205ENST00000461203 HMGXB3Q12766 1538 aa38.64■■■■□ 3.78
C5orf56-205ENST00000461203 ERCC6Q03468 1493 aa38.61■■■■□ 3.77
C5orf56-205ENST00000461203 BAZ1AQ9NRL2 1556 aaPredicted RBP38.6■■■■□ 3.77
C5orf56-205ENST00000461203 CUX2O14529 1486 aa38.53■■■■□ 3.76
C5orf56-205ENST00000461203 DNAJC5Q9H3Z4 198 aa38.47■■■■□ 3.75
C5orf56-205ENST00000461203 BAZ1BQ9UIG0 1483 aaKnown RBP38.47■■■■□ 3.75
C5orf56-205ENST00000461203 PEG3Q9GZU2 1588 aa38.35■■■■□ 3.73
C5orf56-205ENST00000461203 NESP48681 1621 aa38.22■■■■□ 3.71
C5orf56-205ENST00000461203 MROH2BQ7Z745 1585 aa38.19■■■■□ 3.7
C5orf56-205ENST00000461203 LAMC3Q9Y6N6 1575 aa38.08■■■■□ 3.69
C5orf56-205ENST00000461203 PDS5BQ9NTI5 1447 aa37.93■■■■□ 3.66
C5orf56-205ENST00000461203 THOC2Q8NI27 1593 aaKnown RBP37.86■■■■□ 3.65
C5orf56-205ENST00000461203 CADPSQ9ULU8 1353 aa37.76■■■■□ 3.64
C5orf56-205ENST00000461203 KIF21AQ7Z4S6 1674 aa37.74■■■■□ 3.63
C5orf56-205ENST00000461203 WIZO95785 1651 aa37.72■■■■□ 3.63
C5orf56-205ENST00000461203 MRC2Q9UBG0 1479 aa37.53■■■■□ 3.6
C5orf56-205ENST00000461203 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
C5orf56-205ENST00000461203 CEP164Q9UPV0 1460 aa37.4■■■■□ 3.58
C5orf56-205ENST00000461203 WDR62O43379 1518 aa37.4■■■■□ 3.58
C5orf56-205ENST00000461203 TOP2AP11388 1531 aaKnown RBP37.33■■■■□ 3.57
C5orf56-205ENST00000461203 FANCD2Q9BXW9 1451 aa37.32■■■■□ 3.56
C5orf56-205ENST00000461203 CFTRP13569 1480 aa37.3■■■■□ 3.56
C5orf56-205ENST00000461203 URB2Q14146 1524 aaKnown RBP36.94■■■■□ 3.5
C5orf56-205ENST00000461203 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
C5orf56-205ENST00000461203 CCDC88BA6NC98 1476 aa36.87■■■■□ 3.49
C5orf56-205ENST00000461203 TRIM41Q8WV44 630 aa36.81■■■■□ 3.48
C5orf56-205ENST00000461203 OSCARQ8IYS5 282 aa36.79■■■■□ 3.48
C5orf56-205ENST00000461203 IFT140Q96RY7 1462 aa36.66■■■■□ 3.46
C5orf56-205ENST00000461203 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
C5orf56-205ENST00000461203 TOPBP1Q92547 1522 aa36.58■■■■□ 3.45
C5orf56-205ENST00000461203 DNMBPQ6XZF7 1577 aa36.48■■■■□ 3.43
C5orf56-205ENST00000461203 ZNF608Q9ULD9 1512 aaPredicted RBP36.47■■■■□ 3.43
C5orf56-205ENST00000461203 EIF4G3O43432 1585 aaKnown RBP36.32■■■■□ 3.4
C5orf56-205ENST00000461203 TARBP1Q13395 1621 aaKnown RBP36.21■■■■□ 3.39
C5orf56-205ENST00000461203 POLA1P09884 1462 aaPredicted RBP36.2■■■■□ 3.39
C5orf56-205ENST00000461203 RIMBP3CA6NJZ7 1639 aa36.19■■■■□ 3.38
C5orf56-205ENST00000461203 RIMBP3BA6NNM3 1639 aa36.19■■■■□ 3.38
C5orf56-205ENST00000461203 RIMBP3Q9UFD9 1639 aa36.19■■■■□ 3.38
C5orf56-205ENST00000461203 AQRO60306 1485 aaKnown RBP eCLIP36.18■■■■□ 3.38
C5orf56-205ENST00000461203 SOGA1O94964 1423 aa36.09■■■■□ 3.37
C5orf56-205ENST00000461203 ARHGEF11O15085 1522 aa36.09■■■■□ 3.37
C5orf56-205ENST00000461203 FBLN2P98095 1184 aa36.07■■■■□ 3.36
C5orf56-205ENST00000461203 RAD54L2Q9Y4B4 1467 aa36.03■■■■□ 3.36
C5orf56-205ENST00000461203 CHD1O14646 1710 aa36.03■■■■□ 3.36
C5orf56-205ENST00000461203 WDR97A6NE52 1622 aa35.99■■■■□ 3.35
C5orf56-205ENST00000461203 TDRD9Q8NDG6 1382 aaKnown RBP35.98■■■■□ 3.35
C5orf56-205ENST00000461203 FGD5Q6ZNL6 1462 aa35.98■■■■□ 3.35
C5orf56-205ENST00000461203 CUX1P39880 1505 aa35.89■■■■□ 3.34
C5orf56-205ENST00000461203 CYB5RLQ6IPT4 315 aa35.88■■■■□ 3.33
C5orf56-205ENST00000461203 SNAPC4Q5SXM2 1469 aa35.85■■■■□ 3.33
C5orf56-205ENST00000461203 SUPT5HO00267 1087 aaKnown RBP35.82■■■■□ 3.32
C5orf56-205ENST00000461203 CHMP7Q8WUX9 453 aaPredicted RBP35.82■■■■□ 3.32
C5orf56-205ENST00000461203 MAGI1Q96QZ7 1491 aaPredicted RBP35.81■■■■□ 3.32
C5orf56-205ENST00000461203 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
C5orf56-205ENST00000461203 SYNJ1O43426 1573 aa35.72■■■■□ 3.31
C5orf56-205ENST00000461203 ARAP1Q96P48 1450 aa35.71■■■■□ 3.31
C5orf56-205ENST00000461203 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
C5orf56-205ENST00000461203 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
C5orf56-205ENST00000461203 CLASP1Q7Z460 1538 aa35.62■■■■□ 3.29
C5orf56-205ENST00000461203 ABCA10Q8WWZ4 1543 aa35.59■■■■□ 3.29
C5orf56-205ENST00000461203 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
C5orf56-205ENST00000461203 TRHP20396 242 aaPredicted RBP35.57■■■■□ 3.28
C5orf56-205ENST00000461203 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.28
C5orf56-205ENST00000461203 ABCA5Q8WWZ7 1642 aa35.49■■■■□ 3.27
C5orf56-205ENST00000461203 TOP2BQ02880 1626 aa35.36■■■■□ 3.25
C5orf56-205ENST00000461203 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
C5orf56-205ENST00000461203 GRIN2AQ12879 1464 aa35.3■■■■□ 3.24
C5orf56-205ENST00000461203 ADAMTS12P58397 1594 aa35.25■■■■□ 3.23
C5orf56-205ENST00000461203 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
C5orf56-205ENST00000461203 ERICH3Q5RHP9 1530 aa35.17■■■■□ 3.22
C5orf56-205ENST00000461203 NUP160Q12769 1436 aa35.17■■■■□ 3.22
C5orf56-205ENST00000461203 CEP170Q5SW79 1584 aa35.11■■■■□ 3.21
C5orf56-205ENST00000461203 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
C5orf56-205ENST00000461203 SHROOM2Q13796 1616 aa34.98■■■■□ 3.19
C5orf56-205ENST00000461203 JPH4Q96JJ6 628 aa34.86■■■■□ 3.17
C5orf56-205ENST00000461203 PRG4Q92954 1404 aaPredicted RBP34.86■■■■□ 3.17
C5orf56-205ENST00000461203 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
C5orf56-205ENST00000461203 RUSC2Q8N2Y8 1516 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms