RNA–Protein interactions for RNA: ENST00000461180.1

TRUB2-203, Transcript of TruB pseudouridine synthase family member 2, humanhuman

TSL 2

Gene TRUB2, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2-203ENST00000461180 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
TRUB2-203ENST00000461180 ABCC9O60706 1549 aa21.35■■□□□ 1.01
TRUB2-203ENST00000461180 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
TRUB2-203ENST00000461180 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
TRUB2-203ENST00000461180 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
TRUB2-203ENST00000461180 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRUB2-203ENST00000461180 DNAJC5Q9H3Z4 198 aa19.7■□□□□ 0.74
TRUB2-203ENST00000461180 NACADO15069 1562 aa19.4■□□□□ 0.7
TRUB2-203ENST00000461180 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
TRUB2-203ENST00000461180 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
TRUB2-203ENST00000461180 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
TRUB2-203ENST00000461180 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
TRUB2-203ENST00000461180 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
TRUB2-203ENST00000461180 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
TRUB2-203ENST00000461180 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
TRUB2-203ENST00000461180 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
TRUB2-203ENST00000461180 CUX2O14529 1486 aa18.65■□□□□ 0.58
TRUB2-203ENST00000461180 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
TRUB2-203ENST00000461180 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
TRUB2-203ENST00000461180 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
TRUB2-203ENST00000461180 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
TRUB2-203ENST00000461180 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
TRUB2-203ENST00000461180 NESP48681 1621 aa18.08■□□□□ 0.48
TRUB2-203ENST00000461180 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
TRUB2-203ENST00000461180 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
TRUB2-203ENST00000461180 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
TRUB2-203ENST00000461180 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
TRUB2-203ENST00000461180 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
TRUB2-203ENST00000461180 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
TRUB2-203ENST00000461180 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
TRUB2-203ENST00000461180 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
TRUB2-203ENST00000461180 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
TRUB2-203ENST00000461180 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
TRUB2-203ENST00000461180 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
TRUB2-203ENST00000461180 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
TRUB2-203ENST00000461180 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
TRUB2-203ENST00000461180 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
TRUB2-203ENST00000461180 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
TRUB2-203ENST00000461180 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
TRUB2-203ENST00000461180 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
TRUB2-203ENST00000461180 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
TRUB2-203ENST00000461180 WDR62O43379 1518 aa17.53■□□□□ 0.4
TRUB2-203ENST00000461180 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
TRUB2-203ENST00000461180 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
TRUB2-203ENST00000461180 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
TRUB2-203ENST00000461180 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
TRUB2-203ENST00000461180 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
TRUB2-203ENST00000461180 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
TRUB2-203ENST00000461180 ARAP1Q96P48 1450 aa17.22■□□□□ 0.35
TRUB2-203ENST00000461180 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
TRUB2-203ENST00000461180 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
TRUB2-203ENST00000461180 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
TRUB2-203ENST00000461180 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
TRUB2-203ENST00000461180 CHD1O14646 1710 aa17.03■□□□□ 0.32
TRUB2-203ENST00000461180 FBLN2P98095 1184 aa16.98■□□□□ 0.31
TRUB2-203ENST00000461180 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
TRUB2-203ENST00000461180 EIF4G3O43432 1585 aaKnown RBP16.97■□□□□ 0.31
TRUB2-203ENST00000461180 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
TRUB2-203ENST00000461180 CFTRP13569 1480 aa16.96■□□□□ 0.31
TRUB2-203ENST00000461180 WIZO95785 1651 aa16.94■□□□□ 0.3
TRUB2-203ENST00000461180 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRUB2-203ENST00000461180 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
TRUB2-203ENST00000461180 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
TRUB2-203ENST00000461180 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
TRUB2-203ENST00000461180 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
TRUB2-203ENST00000461180 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
TRUB2-203ENST00000461180 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
TRUB2-203ENST00000461180 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
TRUB2-203ENST00000461180 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
TRUB2-203ENST00000461180 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
TRUB2-203ENST00000461180 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
TRUB2-203ENST00000461180 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
TRUB2-203ENST00000461180 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
TRUB2-203ENST00000461180 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
TRUB2-203ENST00000461180 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
TRUB2-203ENST00000461180 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
TRUB2-203ENST00000461180 KIF13AQ9H1H9 1805 aa16.54■□□□□ 0.24
TRUB2-203ENST00000461180 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
TRUB2-203ENST00000461180 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
TRUB2-203ENST00000461180 SOGA1O94964 1423 aa16.46■□□□□ 0.23
TRUB2-203ENST00000461180 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
TRUB2-203ENST00000461180 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
TRUB2-203ENST00000461180 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
TRUB2-203ENST00000461180 KDM6BO15054 1643 aa16.39■□□□□ 0.21
TRUB2-203ENST00000461180 HECW2Q9P2P5 1572 aa16.38■□□□□ 0.21
TRUB2-203ENST00000461180 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
TRUB2-203ENST00000461180 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
TRUB2-203ENST00000461180 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
TRUB2-203ENST00000461180 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
TRUB2-203ENST00000461180 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
TRUB2-203ENST00000461180 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
TRUB2-203ENST00000461180 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
TRUB2-203ENST00000461180 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
TRUB2-203ENST00000461180 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
TRUB2-203ENST00000461180 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
TRUB2-203ENST00000461180 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
TRUB2-203ENST00000461180 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
TRUB2-203ENST00000461180 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
TRUB2-203ENST00000461180 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRUB2-203ENST00000461180 CUX1P39880 1505 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms