RNA–Protein interactions for RNA: ENST00000461146.3

RN7SL50P-201, Transcript of RNA, 7SL, cytoplasmic 50, pseudogene, humanhuman

BASIC

Gene RN7SL50P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL50P-201ENST00000461146 NISCHQ9Y2I1 1504 aa24.02■■□□□ 1.44
RN7SL50P-201ENST00000461146 ABCC9O60706 1549 aa21.96■■□□□ 1.11
RN7SL50P-201ENST00000461146 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
RN7SL50P-201ENST00000461146 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
RN7SL50P-201ENST00000461146 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
RN7SL50P-201ENST00000461146 NACADO15069 1562 aa20.57■□□□□ 0.88
RN7SL50P-201ENST00000461146 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
RN7SL50P-201ENST00000461146 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
RN7SL50P-201ENST00000461146 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
RN7SL50P-201ENST00000461146 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
RN7SL50P-201ENST00000461146 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
RN7SL50P-201ENST00000461146 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
RN7SL50P-201ENST00000461146 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
RN7SL50P-201ENST00000461146 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
RN7SL50P-201ENST00000461146 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
RN7SL50P-201ENST00000461146 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
RN7SL50P-201ENST00000461146 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
RN7SL50P-201ENST00000461146 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
RN7SL50P-201ENST00000461146 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
RN7SL50P-201ENST00000461146 CUX2O14529 1486 aa19.11■□□□□ 0.65
RN7SL50P-201ENST00000461146 NCAPD3P42695 1498 aa19.08■□□□□ 0.64
RN7SL50P-201ENST00000461146 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
RN7SL50P-201ENST00000461146 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
RN7SL50P-201ENST00000461146 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
RN7SL50P-201ENST00000461146 NESP48681 1621 aa18.82■□□□□ 0.6
RN7SL50P-201ENST00000461146 SMARCA2P51531 1590 aa18.79■□□□□ 0.6
RN7SL50P-201ENST00000461146 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
RN7SL50P-201ENST00000461146 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
RN7SL50P-201ENST00000461146 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
RN7SL50P-201ENST00000461146 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
RN7SL50P-201ENST00000461146 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
RN7SL50P-201ENST00000461146 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
RN7SL50P-201ENST00000461146 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
RN7SL50P-201ENST00000461146 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
RN7SL50P-201ENST00000461146 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
RN7SL50P-201ENST00000461146 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
RN7SL50P-201ENST00000461146 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
RN7SL50P-201ENST00000461146 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
RN7SL50P-201ENST00000461146 WDR62O43379 1518 aa18.38■□□□□ 0.53
RN7SL50P-201ENST00000461146 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
RN7SL50P-201ENST00000461146 CFTRP13569 1480 aa18.19■□□□□ 0.5
RN7SL50P-201ENST00000461146 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
RN7SL50P-201ENST00000461146 WIZO95785 1651 aa18.18■□□□□ 0.5
RN7SL50P-201ENST00000461146 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
RN7SL50P-201ENST00000461146 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
RN7SL50P-201ENST00000461146 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
RN7SL50P-201ENST00000461146 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
RN7SL50P-201ENST00000461146 RIMBP3CA6NJZ7 1639 aa17.93■□□□□ 0.46
RN7SL50P-201ENST00000461146 RIMBP3BA6NNM3 1639 aa17.93■□□□□ 0.46
RN7SL50P-201ENST00000461146 RIMBP3Q9UFD9 1639 aa17.93■□□□□ 0.46
RN7SL50P-201ENST00000461146 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
RN7SL50P-201ENST00000461146 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
RN7SL50P-201ENST00000461146 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
RN7SL50P-201ENST00000461146 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
RN7SL50P-201ENST00000461146 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
RN7SL50P-201ENST00000461146 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
RN7SL50P-201ENST00000461146 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
RN7SL50P-201ENST00000461146 EIF4G3O43432 1585 aaKnown RBP17.73■□□□□ 0.43
RN7SL50P-201ENST00000461146 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
RN7SL50P-201ENST00000461146 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.43
RN7SL50P-201ENST00000461146 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
RN7SL50P-201ENST00000461146 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
RN7SL50P-201ENST00000461146 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
RN7SL50P-201ENST00000461146 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
RN7SL50P-201ENST00000461146 CHD1O14646 1710 aa17.59■□□□□ 0.41
RN7SL50P-201ENST00000461146 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
RN7SL50P-201ENST00000461146 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
RN7SL50P-201ENST00000461146 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
RN7SL50P-201ENST00000461146 FBLN2P98095 1184 aa17.54■□□□□ 0.4
RN7SL50P-201ENST00000461146 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
RN7SL50P-201ENST00000461146 SOGA1O94964 1423 aa17.51■□□□□ 0.39
RN7SL50P-201ENST00000461146 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
RN7SL50P-201ENST00000461146 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
RN7SL50P-201ENST00000461146 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
RN7SL50P-201ENST00000461146 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
RN7SL50P-201ENST00000461146 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
RN7SL50P-201ENST00000461146 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
RN7SL50P-201ENST00000461146 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
RN7SL50P-201ENST00000461146 CUX1P39880 1505 aa17.39■□□□□ 0.37
RN7SL50P-201ENST00000461146 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
RN7SL50P-201ENST00000461146 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
RN7SL50P-201ENST00000461146 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
RN7SL50P-201ENST00000461146 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
RN7SL50P-201ENST00000461146 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
RN7SL50P-201ENST00000461146 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
RN7SL50P-201ENST00000461146 NUP160Q12769 1436 aa17.2■□□□□ 0.34
RN7SL50P-201ENST00000461146 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
RN7SL50P-201ENST00000461146 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
RN7SL50P-201ENST00000461146 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
RN7SL50P-201ENST00000461146 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
RN7SL50P-201ENST00000461146 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
RN7SL50P-201ENST00000461146 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
RN7SL50P-201ENST00000461146 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
RN7SL50P-201ENST00000461146 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
RN7SL50P-201ENST00000461146 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
RN7SL50P-201ENST00000461146 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
RN7SL50P-201ENST00000461146 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
RN7SL50P-201ENST00000461146 JPH4Q96JJ6 628 aa16.97■□□□□ 0.31
RN7SL50P-201ENST00000461146 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
RN7SL50P-201ENST00000461146 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms