RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
CHRD-209ENST00000461120 ABCC9O60706 1549 aa29.68■■■□□ 2.34
CHRD-209ENST00000461120 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
CHRD-209ENST00000461120 DNAJC5BQ9UF47 199 aa28.89■■■□□ 2.22
CHRD-209ENST00000461120 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
CHRD-209ENST00000461120 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
CHRD-209ENST00000461120 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
CHRD-209ENST00000461120 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.982e-9■■□□□ 12.2
CHRD-209ENST00000461120 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
CHRD-209ENST00000461120 NACADO15069 1562 aa27.24■■□□□ 1.95
CHRD-209ENST00000461120 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
CHRD-209ENST00000461120 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
CHRD-209ENST00000461120 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
CHRD-209ENST00000461120 CECR2Q9BXF3 1484 aa26.91■■□□□ 1.9
CHRD-209ENST00000461120 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
CHRD-209ENST00000461120 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
CHRD-209ENST00000461120 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
CHRD-209ENST00000461120 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
CHRD-209ENST00000461120 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
CHRD-209ENST00000461120 CUX2O14529 1486 aa26.2■■□□□ 1.78
CHRD-209ENST00000461120 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
CHRD-209ENST00000461120 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
CHRD-209ENST00000461120 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
CHRD-209ENST00000461120 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
CHRD-209ENST00000461120 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
CHRD-209ENST00000461120 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
CHRD-209ENST00000461120 SMARCA2P51531 1590 aa25.19■■□□□ 1.62
CHRD-209ENST00000461120 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
CHRD-209ENST00000461120 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
CHRD-209ENST00000461120 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
CHRD-209ENST00000461120 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
CHRD-209ENST00000461120 WIZO95785 1651 aa25.08■■□□□ 1.61
CHRD-209ENST00000461120 NESP48681 1621 aa25.06■■□□□ 1.6
CHRD-209ENST00000461120 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
CHRD-209ENST00000461120 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
CHRD-209ENST00000461120 AEBP2Q6ZN18 517 aaPredicted RBP24.9■■□□□ 1.58
CHRD-209ENST00000461120 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
CHRD-209ENST00000461120 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
CHRD-209ENST00000461120 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
CHRD-209ENST00000461120 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
CHRD-209ENST00000461120 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
CHRD-209ENST00000461120 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
CHRD-209ENST00000461120 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
CHRD-209ENST00000461120 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
CHRD-209ENST00000461120 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
CHRD-209ENST00000461120 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
CHRD-209ENST00000461120 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
CHRD-209ENST00000461120 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
CHRD-209ENST00000461120 WDR62O43379 1518 aa24.5■■□□□ 1.51
CHRD-209ENST00000461120 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
CHRD-209ENST00000461120 CFTRP13569 1480 aa24.35■■□□□ 1.49
CHRD-209ENST00000461120 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
CHRD-209ENST00000461120 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
CHRD-209ENST00000461120 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.47
CHRD-209ENST00000461120 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
CHRD-209ENST00000461120 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
CHRD-209ENST00000461120 ARAP1Q96P48 1450 aa23.95■■□□□ 1.42
CHRD-209ENST00000461120 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
CHRD-209ENST00000461120 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
CHRD-209ENST00000461120 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
CHRD-209ENST00000461120 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
CHRD-209ENST00000461120 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
CHRD-209ENST00000461120 CHD1O14646 1710 aa23.77■■□□□ 1.4
CHRD-209ENST00000461120 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
CHRD-209ENST00000461120 CUX1P39880 1505 aa23.76■■□□□ 1.39
CHRD-209ENST00000461120 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
CHRD-209ENST00000461120 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
CHRD-209ENST00000461120 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
CHRD-209ENST00000461120 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
CHRD-209ENST00000461120 FBLN2P98095 1184 aa23.64■■□□□ 1.37
CHRD-209ENST00000461120 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
CHRD-209ENST00000461120 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
CHRD-209ENST00000461120 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
CHRD-209ENST00000461120 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
CHRD-209ENST00000461120 SOGA1O94964 1423 aa23.53■■□□□ 1.36
CHRD-209ENST00000461120 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
CHRD-209ENST00000461120 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
CHRD-209ENST00000461120 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
CHRD-209ENST00000461120 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.34
CHRD-209ENST00000461120 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
CHRD-209ENST00000461120 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
CHRD-209ENST00000461120 CLASP1Q7Z460 1538 aa23.36■■□□□ 1.33
CHRD-209ENST00000461120 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
CHRD-209ENST00000461120 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
CHRD-209ENST00000461120 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
CHRD-209ENST00000461120 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
CHRD-209ENST00000461120 GRIN2BQ13224 1484 aa23.21■■□□□ 1.31
CHRD-209ENST00000461120 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
CHRD-209ENST00000461120 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
CHRD-209ENST00000461120 KIF13AQ9H1H9 1805 aa23.17■■□□□ 1.3
CHRD-209ENST00000461120 KDM4FA0A1W2PPD8 638 aa23.16■■□□□ 1.3
CHRD-209ENST00000461120 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
CHRD-209ENST00000461120 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
CHRD-209ENST00000461120 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
CHRD-209ENST00000461120 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
CHRD-209ENST00000461120 IGF1RP08069 1367 aa23.07■■□□□ 1.28
CHRD-209ENST00000461120 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
CHRD-209ENST00000461120 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
CHRD-209ENST00000461120 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
CHRD-209ENST00000461120 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms