RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 NISCHQ9Y2I1 1504 aa45.91■■■■■ 4.94
COL9A2-205ENST00000461118 ABCC9O60706 1549 aa41.55■■■■■ 4.24
COL9A2-205ENST00000461118 CCDC180Q9P1Z9 1646 aa41.38■■■■■ 4.21
COL9A2-205ENST00000461118 RB1CC1Q8TDY2 1594 aa39.45■■■■□ 3.91
COL9A2-205ENST00000461118 DNAJC5BQ9UF47 199 aa39.31■■■■□ 3.88
COL9A2-205ENST00000461118 NACADO15069 1562 aa39.12■■■■□ 3.85
COL9A2-205ENST00000461118 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
COL9A2-205ENST00000461118 DCAF8L2P0C7V8 631 aa38.65■■■■□ 3.78
COL9A2-205ENST00000461118 PABPN1Q86U42 306 aaKnown RBP eCLIP38.59■■■■□ 3.778e-7■■■□□ 14.6
COL9A2-205ENST00000461118 MYO15BQ96JP2 1530 aa38.52■■■■□ 3.76
COL9A2-205ENST00000461118 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
COL9A2-205ENST00000461118 ZCCHC6Q5VYS8 1495 aaKnown RBP38■■■■□ 3.67
COL9A2-205ENST00000461118 DCAF1Q9Y4B6 1507 aa37.92■■■■□ 3.66
COL9A2-205ENST00000461118 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
COL9A2-205ENST00000461118 SCRIBQ14160 1630 aa37.62■■■■□ 3.61
COL9A2-205ENST00000461118 CC2D2AQ9P2K1 1620 aa37.6■■■■□ 3.61
COL9A2-205ENST00000461118 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
COL9A2-205ENST00000461118 EIF4G1Q04637 1599 aaKnown RBP37.44■■■■□ 3.58
COL9A2-205ENST00000461118 DNAJC5Q9H3Z4 198 aa36.24■■■■□ 3.39
COL9A2-205ENST00000461118 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
COL9A2-205ENST00000461118 ATAD2BQ9ULI0 1458 aa35.96■■■■□ 3.35
COL9A2-205ENST00000461118 CUX2O14529 1486 aa35.93■■■■□ 3.34
COL9A2-205ENST00000461118 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
COL9A2-205ENST00000461118 HMGXB3Q12766 1538 aa35.84■■■■□ 3.33
COL9A2-205ENST00000461118 SMARCA2P51531 1590 aa35.82■■■■□ 3.32
COL9A2-205ENST00000461118 ERCC6Q03468 1493 aa35.81■■■■□ 3.32
COL9A2-205ENST00000461118 NESP48681 1621 aa35.68■■■■□ 3.3
COL9A2-205ENST00000461118 BAZ1AQ9NRL2 1556 aaPredicted RBP35.63■■■■□ 3.29
COL9A2-205ENST00000461118 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
COL9A2-205ENST00000461118 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
COL9A2-205ENST00000461118 THOC2Q8NI27 1593 aaKnown RBP35.42■■■■□ 3.26
COL9A2-205ENST00000461118 MROH2BQ7Z745 1585 aa35.39■■■■□ 3.26
COL9A2-205ENST00000461118 LAMC3Q9Y6N6 1575 aa35.36■■■■□ 3.25
COL9A2-205ENST00000461118 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
COL9A2-205ENST00000461118 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
COL9A2-205ENST00000461118 WIZO95785 1651 aa34.98■■■■□ 3.19
COL9A2-205ENST00000461118 CADPSQ9ULU8 1353 aa34.96■■■■□ 3.19
COL9A2-205ENST00000461118 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
COL9A2-205ENST00000461118 WDR62O43379 1518 aa34.82■■■■□ 3.16
COL9A2-205ENST00000461118 CEP164Q9UPV0 1460 aa34.62■■■■□ 3.13
COL9A2-205ENST00000461118 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
COL9A2-205ENST00000461118 CFTRP13569 1480 aa34.55■■■■□ 3.12
COL9A2-205ENST00000461118 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.12
COL9A2-205ENST00000461118 TOP2AP11388 1531 aaKnown RBP34.46■■■■□ 3.11
COL9A2-205ENST00000461118 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
COL9A2-205ENST00000461118 URB2Q14146 1524 aaKnown RBP34.37■■■■□ 3.09
COL9A2-205ENST00000461118 PRDM2Q13029 1718 aa34.31■■■■□ 3.08
COL9A2-205ENST00000461118 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
COL9A2-205ENST00000461118 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.04
COL9A2-205ENST00000461118 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
COL9A2-205ENST00000461118 IFT140Q96RY7 1462 aa33.95■■■■□ 3.02
COL9A2-205ENST00000461118 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
COL9A2-205ENST00000461118 RIMBP3CA6NJZ7 1639 aa33.91■■■■□ 3.02
COL9A2-205ENST00000461118 RIMBP3BA6NNM3 1639 aa33.91■■■■□ 3.02
COL9A2-205ENST00000461118 RIMBP3Q9UFD9 1639 aa33.91■■■■□ 3.02
COL9A2-205ENST00000461118 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
COL9A2-205ENST00000461118 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
COL9A2-205ENST00000461118 ABCC8Q09428 1581 aa33.77■■■■□ 3
COL9A2-205ENST00000461118 ARHGEF11O15085 1522 aa33.73■■■□□ 2.99
COL9A2-205ENST00000461118 TARBP1Q13395 1621 aaKnown RBP33.72■■■□□ 2.99
COL9A2-205ENST00000461118 CHD1O14646 1710 aa33.66■■■□□ 2.98
COL9A2-205ENST00000461118 AQRO60306 1485 aaKnown RBP eCLIP33.6■■■□□ 2.97
COL9A2-205ENST00000461118 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
COL9A2-205ENST00000461118 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
COL9A2-205ENST00000461118 ARAP1Q96P48 1450 aa33.38■■■□□ 2.93
COL9A2-205ENST00000461118 CYB5RLQ6IPT4 315 aa33.38■■■□□ 2.93
COL9A2-205ENST00000461118 SOGA1O94964 1423 aa33.33■■■□□ 2.93
COL9A2-205ENST00000461118 TDRD9Q8NDG6 1382 aaKnown RBP33.32■■■□□ 2.92
COL9A2-205ENST00000461118 WDR97A6NE52 1622 aa33.29■■■□□ 2.92
COL9A2-205ENST00000461118 FBLN2P98095 1184 aa33.29■■■□□ 2.92
COL9A2-205ENST00000461118 FGD5Q6ZNL6 1462 aa33.29■■■□□ 2.92
COL9A2-205ENST00000461118 CUX1P39880 1505 aa33.26■■■□□ 2.91
COL9A2-205ENST00000461118 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
COL9A2-205ENST00000461118 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
COL9A2-205ENST00000461118 MAGI1Q96QZ7 1491 aaPredicted RBP33.14■■■□□ 2.9
COL9A2-205ENST00000461118 SUPT5HO00267 1087 aaKnown RBP33.13■■■□□ 2.89
COL9A2-205ENST00000461118 SYNJ1O43426 1573 aa33.1■■■□□ 2.89
COL9A2-205ENST00000461118 GRIN2BQ13224 1484 aa33.09■■■□□ 2.89
COL9A2-205ENST00000461118 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
COL9A2-205ENST00000461118 SYNJ2O15056 1496 aa33.04■■■□□ 2.88
COL9A2-205ENST00000461118 TRHP20396 242 aaPredicted RBP33.03■■■□□ 2.88
COL9A2-205ENST00000461118 CHMP7Q8WUX9 453 aaPredicted RBP33.02■■■□□ 2.88
COL9A2-205ENST00000461118 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.87
COL9A2-205ENST00000461118 GAPVD1Q14C86 1478 aa32.94■■■□□ 2.86
COL9A2-205ENST00000461118 ABCA10Q8WWZ4 1543 aa32.91■■■□□ 2.86
COL9A2-205ENST00000461118 ERCC6L2Q5T890 1561 aa32.71■■■□□ 2.83
COL9A2-205ENST00000461118 GRIN2AQ12879 1464 aa32.7■■■□□ 2.83
COL9A2-205ENST00000461118 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
COL9A2-205ENST00000461118 ADAMTS12P58397 1594 aa32.69■■■□□ 2.82
COL9A2-205ENST00000461118 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
COL9A2-205ENST00000461118 TOP2BQ02880 1626 aa32.66■■■□□ 2.82
COL9A2-205ENST00000461118 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
COL9A2-205ENST00000461118 NUP160Q12769 1436 aa32.62■■■□□ 2.81
COL9A2-205ENST00000461118 SHROOM2Q13796 1616 aa32.59■■■□□ 2.81
COL9A2-205ENST00000461118 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
COL9A2-205ENST00000461118 ERICH3Q5RHP9 1530 aa32.48■■■□□ 2.79
COL9A2-205ENST00000461118 KIF13AQ9H1H9 1805 aa32.37■■■□□ 2.77
COL9A2-205ENST00000461118 PRG4Q92954 1404 aaPredicted RBP32.26■■■□□ 2.76
COL9A2-205ENST00000461118 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.75
COL9A2-205ENST00000461118 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms