RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 NISCHQ9Y2I1 1504 aa44.04■■■■■ 4.64
SLC39A1-208ENST00000461071 CCDC180Q9P1Z9 1646 aa39.71■■■■□ 3.95
SLC39A1-208ENST00000461071 ABCC9O60706 1549 aa39.65■■■■□ 3.94
SLC39A1-208ENST00000461071 RB1CC1Q8TDY2 1594 aa37.8■■■■□ 3.64
SLC39A1-208ENST00000461071 NACADO15069 1562 aa37.52■■■■□ 3.6
SLC39A1-208ENST00000461071 DNAJC5BQ9UF47 199 aa37.38■■■■□ 3.57
SLC39A1-208ENST00000461071 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
SLC39A1-208ENST00000461071 MYO15BQ96JP2 1530 aa37.02■■■■□ 3.52
SLC39A1-208ENST00000461071 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.52
SLC39A1-208ENST00000461071 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
SLC39A1-208ENST00000461071 BICRAQ9NZM4 1560 aa36.73■■■■□ 3.47
SLC39A1-208ENST00000461071 DCAF1Q9Y4B6 1507 aa36.46■■■■□ 3.43
SLC39A1-208ENST00000461071 ZCCHC6Q5VYS8 1495 aaKnown RBP36.46■■■■□ 3.43
SLC39A1-208ENST00000461071 SHROOM4Q9ULL8 1493 aa36.28■■■■□ 3.4
SLC39A1-208ENST00000461071 SCRIBQ14160 1630 aa36■■■■□ 3.35
SLC39A1-208ENST00000461071 CC2D2AQ9P2K1 1620 aa35.91■■■■□ 3.34
SLC39A1-208ENST00000461071 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
SLC39A1-208ENST00000461071 CECR2Q9BXF3 1484 aa35.79■■■■□ 3.32
SLC39A1-208ENST00000461071 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
SLC39A1-208ENST00000461071 DNAJC5Q9H3Z4 198 aa34.51■■■■□ 3.12
SLC39A1-208ENST00000461071 ATAD2BQ9ULI0 1458 aa34.45■■■■□ 3.1
SLC39A1-208ENST00000461071 SMARCA4P51532 1647 aa34.41■■■■□ 3.1
SLC39A1-208ENST00000461071 SMARCA2P51531 1590 aa34.39■■■■□ 3.1
SLC39A1-208ENST00000461071 HMGXB3Q12766 1538 aa34.37■■■■□ 3.09
SLC39A1-208ENST00000461071 CUX2O14529 1486 aa34.36■■■■□ 3.09
SLC39A1-208ENST00000461071 ERCC6Q03468 1493 aa34.26■■■■□ 3.07
SLC39A1-208ENST00000461071 BAZ1AQ9NRL2 1556 aaPredicted RBP34.2■■■■□ 3.07
SLC39A1-208ENST00000461071 PEG3Q9GZU2 1588 aa34.15■■■■□ 3.06
SLC39A1-208ENST00000461071 BAZ1BQ9UIG0 1483 aaKnown RBP34.08■■■■□ 3.05
SLC39A1-208ENST00000461071 NESP48681 1621 aa34.04■■■■□ 3.04
SLC39A1-208ENST00000461071 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
SLC39A1-208ENST00000461071 LAMC3Q9Y6N6 1575 aa33.89■■■■□ 3.02
SLC39A1-208ENST00000461071 THOC2Q8NI27 1593 aaKnown RBP33.82■■■■□ 3
SLC39A1-208ENST00000461071 KIF21AQ7Z4S6 1674 aa33.7■■■□□ 2.99
SLC39A1-208ENST00000461071 PDS5BQ9NTI5 1447 aa33.63■■■□□ 2.97
SLC39A1-208ENST00000461071 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.96
SLC39A1-208ENST00000461071 WIZO95785 1651 aa33.5■■■□□ 2.95
SLC39A1-208ENST00000461071 MRC2Q9UBG0 1479 aa33.36■■■□□ 2.93
SLC39A1-208ENST00000461071 WDR62O43379 1518 aa33.32■■■□□ 2.92
SLC39A1-208ENST00000461071 CEP164Q9UPV0 1460 aa33.17■■■□□ 2.9
SLC39A1-208ENST00000461071 RSF1Q96T23 1441 aaPredicted RBP33.13■■■□□ 2.89
SLC39A1-208ENST00000461071 CFTRP13569 1480 aa33.12■■■□□ 2.89
SLC39A1-208ENST00000461071 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
SLC39A1-208ENST00000461071 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.89
SLC39A1-208ENST00000461071 PRDM2Q13029 1718 aa32.93■■■□□ 2.86
SLC39A1-208ENST00000461071 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
SLC39A1-208ENST00000461071 TRIM41Q8WV44 630 aa32.75■■■□□ 2.83
SLC39A1-208ENST00000461071 OSCARQ8IYS5 282 aa32.7■■■□□ 2.83
SLC39A1-208ENST00000461071 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
SLC39A1-208ENST00000461071 IFT140Q96RY7 1462 aa32.54■■■□□ 2.8
SLC39A1-208ENST00000461071 TOPBP1Q92547 1522 aa32.49■■■□□ 2.79
SLC39A1-208ENST00000461071 ZNF608Q9ULD9 1512 aaPredicted RBP32.46■■■□□ 2.79
SLC39A1-208ENST00000461071 ABCC8Q09428 1581 aa32.46■■■□□ 2.79
SLC39A1-208ENST00000461071 DNMBPQ6XZF7 1577 aa32.39■■■□□ 2.78
SLC39A1-208ENST00000461071 RIMBP3CA6NJZ7 1639 aa32.34■■■□□ 2.77
SLC39A1-208ENST00000461071 RIMBP3BA6NNM3 1639 aa32.34■■■□□ 2.77
SLC39A1-208ENST00000461071 RIMBP3Q9UFD9 1639 aa32.34■■■□□ 2.77
SLC39A1-208ENST00000461071 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.77
SLC39A1-208ENST00000461071 TARBP1Q13395 1621 aaKnown RBP32.28■■■□□ 2.76
SLC39A1-208ENST00000461071 ARHGEF11O15085 1522 aa32.2■■■□□ 2.74
SLC39A1-208ENST00000461071 CHD1O14646 1710 aa32.17■■■□□ 2.74
SLC39A1-208ENST00000461071 POLA1P09884 1462 aaPredicted RBP32.14■■■□□ 2.74
SLC39A1-208ENST00000461071 AQRO60306 1485 aaKnown RBP eCLIP32.13■■■□□ 2.733e-6■■■■□ 19.3
SLC39A1-208ENST00000461071 WDR97A6NE52 1622 aa32■■■□□ 2.71
SLC39A1-208ENST00000461071 RAD54L2Q9Y4B4 1467 aa31.97■■■□□ 2.71
SLC39A1-208ENST00000461071 SOGA1O94964 1423 aa31.96■■■□□ 2.71
SLC39A1-208ENST00000461071 FGD5Q6ZNL6 1462 aa31.9■■■□□ 2.7
SLC39A1-208ENST00000461071 TDRD9Q8NDG6 1382 aaKnown RBP31.89■■■□□ 2.7
SLC39A1-208ENST00000461071 CUX1P39880 1505 aa31.87■■■□□ 2.69
SLC39A1-208ENST00000461071 CYB5RLQ6IPT4 315 aa31.87■■■□□ 2.69
SLC39A1-208ENST00000461071 ARAP1Q96P48 1450 aa31.86■■■□□ 2.69
SLC39A1-208ENST00000461071 FBLN2P98095 1184 aa31.85■■■□□ 2.69
SLC39A1-208ENST00000461071 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
SLC39A1-208ENST00000461071 MAGI1Q96QZ7 1491 aaPredicted RBP31.79■■■□□ 2.68
SLC39A1-208ENST00000461071 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
SLC39A1-208ENST00000461071 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
SLC39A1-208ENST00000461071 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
SLC39A1-208ENST00000461071 SYNJ2O15056 1496 aa31.67■■■□□ 2.66
SLC39A1-208ENST00000461071 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
SLC39A1-208ENST00000461071 CHMP7Q8WUX9 453 aaPredicted RBP31.66■■■□□ 2.66
SLC39A1-208ENST00000461071 GAPVD1Q14C86 1478 aa31.59■■■□□ 2.65
SLC39A1-208ENST00000461071 ABCA10Q8WWZ4 1543 aa31.57■■■□□ 2.64
SLC39A1-208ENST00000461071 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
SLC39A1-208ENST00000461071 TRHP20396 242 aaPredicted RBP31.53■■■□□ 2.64
SLC39A1-208ENST00000461071 BIVM-ERCC5R4GMW8 1640 aa31.38■■■□□ 2.61
SLC39A1-208ENST00000461071 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
SLC39A1-208ENST00000461071 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
SLC39A1-208ENST00000461071 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
SLC39A1-208ENST00000461071 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
SLC39A1-208ENST00000461071 ADAMTS12P58397 1594 aa31.31■■■□□ 2.6
SLC39A1-208ENST00000461071 NUP160Q12769 1436 aa31.26■■■□□ 2.6
SLC39A1-208ENST00000461071 CEP170Q5SW79 1584 aa31.23■■■□□ 2.59
SLC39A1-208ENST00000461071 SHROOM2Q13796 1616 aa31.2■■■□□ 2.59
SLC39A1-208ENST00000461071 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.58
SLC39A1-208ENST00000461071 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
SLC39A1-208ENST00000461071 FHAD1B1AJZ9 1412 aa31.19■■■□□ 2.58
SLC39A1-208ENST00000461071 PRG4Q92954 1404 aaPredicted RBP30.9■■■□□ 2.54
SLC39A1-208ENST00000461071 KIF13AQ9H1H9 1805 aa30.9■■■□□ 2.54
SLC39A1-208ENST00000461071 RUSC2Q8N2Y8 1516 aa30.88■■■□□ 2.53
SLC39A1-208ENST00000461071 JPH4Q96JJ6 628 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms