RNA–Protein interactions for RNA: ENST00000461050.5

RIT1-203, Transcript of Ras like without CAAX 1, humanhuman

TSL 5

Gene RIT1, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIT1-203ENST00000461050 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
RIT1-203ENST00000461050 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
RIT1-203ENST00000461050 ABCC9O60706 1549 aa29.24■■■□□ 2.27
RIT1-203ENST00000461050 RB1CC1Q8TDY2 1594 aa27.82■■■□□ 2.04
RIT1-203ENST00000461050 NACADO15069 1562 aa27.65■■■□□ 2.02
RIT1-203ENST00000461050 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
RIT1-203ENST00000461050 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
RIT1-203ENST00000461050 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
RIT1-203ENST00000461050 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
RIT1-203ENST00000461050 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
RIT1-203ENST00000461050 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
RIT1-203ENST00000461050 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
RIT1-203ENST00000461050 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
RIT1-203ENST00000461050 SCRIBQ14160 1630 aa26.8■■□□□ 1.88
RIT1-203ENST00000461050 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
RIT1-203ENST00000461050 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
RIT1-203ENST00000461050 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
RIT1-203ENST00000461050 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
RIT1-203ENST00000461050 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
RIT1-203ENST00000461050 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
RIT1-203ENST00000461050 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
RIT1-203ENST00000461050 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
RIT1-203ENST00000461050 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
RIT1-203ENST00000461050 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
RIT1-203ENST00000461050 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
RIT1-203ENST00000461050 MROH2BQ7Z745 1585 aa25.25■■□□□ 1.63
RIT1-203ENST00000461050 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
RIT1-203ENST00000461050 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
RIT1-203ENST00000461050 NESP48681 1621 aa25.15■■□□□ 1.62
RIT1-203ENST00000461050 CUX2O14529 1486 aa25.07■■□□□ 1.6
RIT1-203ENST00000461050 WIZO95785 1651 aa24.97■■□□□ 1.59
RIT1-203ENST00000461050 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
RIT1-203ENST00000461050 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
RIT1-203ENST00000461050 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
RIT1-203ENST00000461050 KIF21AQ7Z4S6 1674 aa24.83■■□□□ 1.57
RIT1-203ENST00000461050 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
RIT1-203ENST00000461050 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
RIT1-203ENST00000461050 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
RIT1-203ENST00000461050 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
RIT1-203ENST00000461050 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
RIT1-203ENST00000461050 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
RIT1-203ENST00000461050 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
RIT1-203ENST00000461050 WDR62O43379 1518 aa24.51■■□□□ 1.51
RIT1-203ENST00000461050 CFTRP13569 1480 aa24.51■■□□□ 1.51
RIT1-203ENST00000461050 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
RIT1-203ENST00000461050 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
RIT1-203ENST00000461050 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
RIT1-203ENST00000461050 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
RIT1-203ENST00000461050 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
RIT1-203ENST00000461050 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
RIT1-203ENST00000461050 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
RIT1-203ENST00000461050 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
RIT1-203ENST00000461050 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
RIT1-203ENST00000461050 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
RIT1-203ENST00000461050 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
RIT1-203ENST00000461050 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
RIT1-203ENST00000461050 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
RIT1-203ENST00000461050 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
RIT1-203ENST00000461050 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.45e-6■■□□□ 14.3
RIT1-203ENST00000461050 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
RIT1-203ENST00000461050 CUX1P39880 1505 aa23.73■■□□□ 1.39
RIT1-203ENST00000461050 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
RIT1-203ENST00000461050 SOGA1O94964 1423 aa23.71■■□□□ 1.39
RIT1-203ENST00000461050 CHD1O14646 1710 aa23.69■■□□□ 1.38
RIT1-203ENST00000461050 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
RIT1-203ENST00000461050 RIMBP3CA6NJZ7 1639 aa23.67■■□□□ 1.38
RIT1-203ENST00000461050 RIMBP3BA6NNM3 1639 aa23.67■■□□□ 1.38
RIT1-203ENST00000461050 RIMBP3Q9UFD9 1639 aa23.67■■□□□ 1.38
RIT1-203ENST00000461050 FBLN2P98095 1184 aa23.65■■□□□ 1.38
RIT1-203ENST00000461050 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
RIT1-203ENST00000461050 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
RIT1-203ENST00000461050 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
RIT1-203ENST00000461050 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
RIT1-203ENST00000461050 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
RIT1-203ENST00000461050 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
RIT1-203ENST00000461050 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
RIT1-203ENST00000461050 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
RIT1-203ENST00000461050 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
RIT1-203ENST00000461050 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
RIT1-203ENST00000461050 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
RIT1-203ENST00000461050 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
RIT1-203ENST00000461050 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
RIT1-203ENST00000461050 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
RIT1-203ENST00000461050 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
RIT1-203ENST00000461050 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
RIT1-203ENST00000461050 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
RIT1-203ENST00000461050 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
RIT1-203ENST00000461050 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
RIT1-203ENST00000461050 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
RIT1-203ENST00000461050 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
RIT1-203ENST00000461050 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
RIT1-203ENST00000461050 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
RIT1-203ENST00000461050 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
RIT1-203ENST00000461050 NUP160Q12769 1436 aa23.09■■□□□ 1.29
RIT1-203ENST00000461050 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
RIT1-203ENST00000461050 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
RIT1-203ENST00000461050 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
RIT1-203ENST00000461050 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
RIT1-203ENST00000461050 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.25
RIT1-203ENST00000461050 IGF1RP08069 1367 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms