RNA–Protein interactions for RNA: ENST00000460952.1

STRC-207, Transcript of stereocilin, humanhuman

TSL 2

Gene STRC, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-207ENST00000460952 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
STRC-207ENST00000460952 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
STRC-207ENST00000460952 ABCC9O60706 1549 aa23.4■■□□□ 1.34
STRC-207ENST00000460952 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
STRC-207ENST00000460952 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
STRC-207ENST00000460952 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
STRC-207ENST00000460952 NACADO15069 1562 aa22.81■■□□□ 1.24
STRC-207ENST00000460952 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
STRC-207ENST00000460952 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
STRC-207ENST00000460952 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
STRC-207ENST00000460952 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
STRC-207ENST00000460952 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
STRC-207ENST00000460952 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
STRC-207ENST00000460952 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
STRC-207ENST00000460952 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
STRC-207ENST00000460952 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
STRC-207ENST00000460952 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
STRC-207ENST00000460952 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
STRC-207ENST00000460952 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
STRC-207ENST00000460952 MROH2BQ7Z745 1585 aa21.27■□□□□ 0.99
STRC-207ENST00000460952 CC2D2AQ9P2K1 1620 aa21.24■□□□□ 0.99
STRC-207ENST00000460952 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
STRC-207ENST00000460952 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
STRC-207ENST00000460952 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
STRC-207ENST00000460952 ATAD2BQ9ULI0 1458 aa21.09■□□□□ 0.97
STRC-207ENST00000460952 WIZO95785 1651 aa21.07■□□□□ 0.96
STRC-207ENST00000460952 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
STRC-207ENST00000460952 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
STRC-207ENST00000460952 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
STRC-207ENST00000460952 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
STRC-207ENST00000460952 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
STRC-207ENST00000460952 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
STRC-207ENST00000460952 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
STRC-207ENST00000460952 CFTRP13569 1480 aa20.4■□□□□ 0.86
STRC-207ENST00000460952 NESP48681 1621 aa20.39■□□□□ 0.86
STRC-207ENST00000460952 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
STRC-207ENST00000460952 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
STRC-207ENST00000460952 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
STRC-207ENST00000460952 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
STRC-207ENST00000460952 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
STRC-207ENST00000460952 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
STRC-207ENST00000460952 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
STRC-207ENST00000460952 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
STRC-207ENST00000460952 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.8
STRC-207ENST00000460952 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
STRC-207ENST00000460952 WDR62O43379 1518 aa19.99■□□□□ 0.79
STRC-207ENST00000460952 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
STRC-207ENST00000460952 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
STRC-207ENST00000460952 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
STRC-207ENST00000460952 CUX1P39880 1505 aa19.94■□□□□ 0.78
STRC-207ENST00000460952 TOPBP1Q92547 1522 aa19.93■□□□□ 0.78
STRC-207ENST00000460952 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
STRC-207ENST00000460952 CUX2O14529 1486 aa19.9■□□□□ 0.78
STRC-207ENST00000460952 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
STRC-207ENST00000460952 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
STRC-207ENST00000460952 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
STRC-207ENST00000460952 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
STRC-207ENST00000460952 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
STRC-207ENST00000460952 TARBP1Q13395 1621 aaKnown RBP19.71■□□□□ 0.75
STRC-207ENST00000460952 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
STRC-207ENST00000460952 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
STRC-207ENST00000460952 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
STRC-207ENST00000460952 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
STRC-207ENST00000460952 SOGA1O94964 1423 aa19.65■□□□□ 0.74
STRC-207ENST00000460952 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
STRC-207ENST00000460952 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
STRC-207ENST00000460952 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
STRC-207ENST00000460952 ABCA5Q8WWZ7 1642 aa19.57■□□□□ 0.72
STRC-207ENST00000460952 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
STRC-207ENST00000460952 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
STRC-207ENST00000460952 PBRM1Q86U86 1689 aa19.48■□□□□ 0.71
STRC-207ENST00000460952 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.71
STRC-207ENST00000460952 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
STRC-207ENST00000460952 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
STRC-207ENST00000460952 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
STRC-207ENST00000460952 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
STRC-207ENST00000460952 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
STRC-207ENST00000460952 EEA1Q15075 1411 aa19.37■□□□□ 0.69
STRC-207ENST00000460952 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
STRC-207ENST00000460952 ADAMTS12P58397 1594 aa19.35■□□□□ 0.69
STRC-207ENST00000460952 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
STRC-207ENST00000460952 CUL7Q14999 1698 aa19.33■□□□□ 0.69
STRC-207ENST00000460952 IGF1RP08069 1367 aa19.32■□□□□ 0.68
STRC-207ENST00000460952 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
STRC-207ENST00000460952 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
STRC-207ENST00000460952 CHD1O14646 1710 aa19.24■□□□□ 0.67
STRC-207ENST00000460952 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
STRC-207ENST00000460952 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
STRC-207ENST00000460952 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
STRC-207ENST00000460952 KIF21BO75037 1637 aa19.19■□□□□ 0.66
STRC-207ENST00000460952 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
STRC-207ENST00000460952 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
STRC-207ENST00000460952 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
STRC-207ENST00000460952 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
STRC-207ENST00000460952 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
STRC-207ENST00000460952 NUP160Q12769 1436 aa19.09■□□□□ 0.65
STRC-207ENST00000460952 FBLN2P98095 1184 aa19.07■□□□□ 0.64
STRC-207ENST00000460952 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
STRC-207ENST00000460952 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
STRC-207ENST00000460952 CTTNBP2Q8WZ74 1663 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms