RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 NISCHQ9Y2I1 1504 aa40.86■■■■■ 4.13
APTX-210ENST00000460945 CCDC180Q9P1Z9 1646 aa36.49■■■■□ 3.43
APTX-210ENST00000460945 ABCC9O60706 1549 aa36.11■■■■□ 3.37
APTX-210ENST00000460945 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
APTX-210ENST00000460945 NACADO15069 1562 aa34.36■■■■□ 3.09
APTX-210ENST00000460945 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
APTX-210ENST00000460945 MYO15BQ96JP2 1530 aa33.98■■■■□ 3.03
APTX-210ENST00000460945 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
APTX-210ENST00000460945 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
APTX-210ENST00000460945 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
APTX-210ENST00000460945 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
APTX-210ENST00000460945 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
APTX-210ENST00000460945 DNAJC5BQ9UF47 199 aa33.51■■■□□ 2.95
APTX-210ENST00000460945 SCRIBQ14160 1630 aa33.32■■■□□ 2.92
APTX-210ENST00000460945 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
APTX-210ENST00000460945 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
APTX-210ENST00000460945 CC2D2AQ9P2K1 1620 aa32.65■■■□□ 2.82
APTX-210ENST00000460945 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
APTX-210ENST00000460945 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
APTX-210ENST00000460945 NCAPD3P42695 1498 aa31.71■■■□□ 2.67
APTX-210ENST00000460945 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
APTX-210ENST00000460945 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
APTX-210ENST00000460945 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
APTX-210ENST00000460945 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
APTX-210ENST00000460945 HMGXB3Q12766 1538 aa31.52■■■□□ 2.64
APTX-210ENST00000460945 PEG3Q9GZU2 1588 aa31.45■■■□□ 2.63
APTX-210ENST00000460945 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
APTX-210ENST00000460945 WIZO95785 1651 aa31.21■■■□□ 2.59
APTX-210ENST00000460945 NESP48681 1621 aa31.16■■■□□ 2.58
APTX-210ENST00000460945 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
APTX-210ENST00000460945 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
APTX-210ENST00000460945 LAMC3Q9Y6N6 1575 aa30.95■■■□□ 2.54
APTX-210ENST00000460945 CUX2O14529 1486 aa30.86■■■□□ 2.53
APTX-210ENST00000460945 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
APTX-210ENST00000460945 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
APTX-210ENST00000460945 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
APTX-210ENST00000460945 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
APTX-210ENST00000460945 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
APTX-210ENST00000460945 CFTRP13569 1480 aa30.51■■■□□ 2.48
APTX-210ENST00000460945 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
APTX-210ENST00000460945 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
APTX-210ENST00000460945 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
APTX-210ENST00000460945 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
APTX-210ENST00000460945 DNAJC5Q9H3Z4 198 aa30.39■■■□□ 2.46
APTX-210ENST00000460945 WDR62O43379 1518 aa30.37■■■□□ 2.45
APTX-210ENST00000460945 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
APTX-210ENST00000460945 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
APTX-210ENST00000460945 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
APTX-210ENST00000460945 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
APTX-210ENST00000460945 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
APTX-210ENST00000460945 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
APTX-210ENST00000460945 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
APTX-210ENST00000460945 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
APTX-210ENST00000460945 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
APTX-210ENST00000460945 POLA1P09884 1462 aaPredicted RBP29.64■■■□□ 2.34
APTX-210ENST00000460945 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
APTX-210ENST00000460945 CUX1P39880 1505 aa29.59■■■□□ 2.33
APTX-210ENST00000460945 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
APTX-210ENST00000460945 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
APTX-210ENST00000460945 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.325e-8■■□□□ 13.4
APTX-210ENST00000460945 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
APTX-210ENST00000460945 SOGA1O94964 1423 aa29.5■■■□□ 2.31
APTX-210ENST00000460945 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
APTX-210ENST00000460945 CHD1O14646 1710 aa29.38■■■□□ 2.29
APTX-210ENST00000460945 WDR97A6NE52 1622 aa29.34■■■□□ 2.29
APTX-210ENST00000460945 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
APTX-210ENST00000460945 FBLN2P98095 1184 aa29.25■■■□□ 2.27
APTX-210ENST00000460945 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
APTX-210ENST00000460945 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
APTX-210ENST00000460945 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
APTX-210ENST00000460945 TOP2BQ02880 1626 aa29.21■■■□□ 2.27
APTX-210ENST00000460945 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
APTX-210ENST00000460945 PBRM1Q86U86 1689 aa29.2■■■□□ 2.26
APTX-210ENST00000460945 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.26
APTX-210ENST00000460945 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
APTX-210ENST00000460945 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
APTX-210ENST00000460945 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
APTX-210ENST00000460945 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
APTX-210ENST00000460945 GAPVD1Q14C86 1478 aa29.16■■■□□ 2.26
APTX-210ENST00000460945 ABCA5Q8WWZ7 1642 aa29.15■■■□□ 2.26
APTX-210ENST00000460945 MAGI1Q96QZ7 1491 aaPredicted RBP29.13■■■□□ 2.25
APTX-210ENST00000460945 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
APTX-210ENST00000460945 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
APTX-210ENST00000460945 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
APTX-210ENST00000460945 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
APTX-210ENST00000460945 ADAMTS12P58397 1594 aa28.89■■■□□ 2.22
APTX-210ENST00000460945 CYB5RLQ6IPT4 315 aa28.87■■■□□ 2.21
APTX-210ENST00000460945 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
APTX-210ENST00000460945 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
APTX-210ENST00000460945 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
APTX-210ENST00000460945 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
APTX-210ENST00000460945 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
APTX-210ENST00000460945 NUP160Q12769 1436 aa28.69■■■□□ 2.18
APTX-210ENST00000460945 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
APTX-210ENST00000460945 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
APTX-210ENST00000460945 IGF1RP08069 1367 aa28.57■■■□□ 2.16
APTX-210ENST00000460945 SHROOM2Q13796 1616 aa28.56■■■□□ 2.16
APTX-210ENST00000460945 CUL7Q14999 1698 aa28.51■■■□□ 2.16
APTX-210ENST00000460945 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
APTX-210ENST00000460945 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms