RNA–Protein interactions for RNA: ENST00000460941.1

CCDC136-204, Transcript of coiled-coil domain containing 136, humanhuman

TSL 4

Gene CCDC136, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-204ENST00000460941 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
CCDC136-204ENST00000460941 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
CCDC136-204ENST00000460941 ABCC9O60706 1549 aa25.8■■□□□ 1.72
CCDC136-204ENST00000460941 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
CCDC136-204ENST00000460941 NACADO15069 1562 aa24.83■■□□□ 1.57
CCDC136-204ENST00000460941 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
CCDC136-204ENST00000460941 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
CCDC136-204ENST00000460941 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
CCDC136-204ENST00000460941 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
CCDC136-204ENST00000460941 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
CCDC136-204ENST00000460941 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
CCDC136-204ENST00000460941 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
CCDC136-204ENST00000460941 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CCDC136-204ENST00000460941 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
CCDC136-204ENST00000460941 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
CCDC136-204ENST00000460941 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
CCDC136-204ENST00000460941 CC2D2AQ9P2K1 1620 aa23.36■■□□□ 1.33
CCDC136-204ENST00000460941 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
CCDC136-204ENST00000460941 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
CCDC136-204ENST00000460941 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
CCDC136-204ENST00000460941 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
CCDC136-204ENST00000460941 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
CCDC136-204ENST00000460941 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
CCDC136-204ENST00000460941 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
CCDC136-204ENST00000460941 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
CCDC136-204ENST00000460941 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
CCDC136-204ENST00000460941 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
CCDC136-204ENST00000460941 WIZO95785 1651 aa22.63■■□□□ 1.21
CCDC136-204ENST00000460941 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
CCDC136-204ENST00000460941 TOP2AP11388 1531 aaKnown RBP22.42■■□□□ 1.18
CCDC136-204ENST00000460941 NESP48681 1621 aa22.32■■□□□ 1.16
CCDC136-204ENST00000460941 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
CCDC136-204ENST00000460941 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
CCDC136-204ENST00000460941 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
CCDC136-204ENST00000460941 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
CCDC136-204ENST00000460941 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
CCDC136-204ENST00000460941 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
CCDC136-204ENST00000460941 CFTRP13569 1480 aa22.09■■□□□ 1.13
CCDC136-204ENST00000460941 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
CCDC136-204ENST00000460941 CUX2O14529 1486 aa22.03■■□□□ 1.12
CCDC136-204ENST00000460941 PRDM2Q13029 1718 aa22■■□□□ 1.11
CCDC136-204ENST00000460941 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
CCDC136-204ENST00000460941 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
CCDC136-204ENST00000460941 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
CCDC136-204ENST00000460941 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
CCDC136-204ENST00000460941 WDR62O43379 1518 aa21.86■■□□□ 1.09
CCDC136-204ENST00000460941 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
CCDC136-204ENST00000460941 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
CCDC136-204ENST00000460941 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
CCDC136-204ENST00000460941 DNMBPQ6XZF7 1577 aa21.62■■□□□ 1.05
CCDC136-204ENST00000460941 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
CCDC136-204ENST00000460941 CUX1P39880 1505 aa21.46■■□□□ 1.03
CCDC136-204ENST00000460941 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
CCDC136-204ENST00000460941 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
CCDC136-204ENST00000460941 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
CCDC136-204ENST00000460941 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
CCDC136-204ENST00000460941 EIF4G3O43432 1585 aaKnown RBP21.35■■□□□ 1.01
CCDC136-204ENST00000460941 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
CCDC136-204ENST00000460941 SOGA1O94964 1423 aa21.32■■□□□ 1
CCDC136-204ENST00000460941 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
CCDC136-204ENST00000460941 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
CCDC136-204ENST00000460941 TOP2BQ02880 1626 aa21.3■■□□□ 1
CCDC136-204ENST00000460941 SYNJ1O43426 1573 aa21.28■■□□□ 1
CCDC136-204ENST00000460941 WDR97A6NE52 1622 aa21.28■■□□□ 1
CCDC136-204ENST00000460941 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
CCDC136-204ENST00000460941 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.99
CCDC136-204ENST00000460941 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
CCDC136-204ENST00000460941 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
CCDC136-204ENST00000460941 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
CCDC136-204ENST00000460941 GRIN2BQ13224 1484 aa21.11■□□□□ 0.97
CCDC136-204ENST00000460941 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
CCDC136-204ENST00000460941 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
CCDC136-204ENST00000460941 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
CCDC136-204ENST00000460941 CHD1O14646 1710 aa21.07■□□□□ 0.96
CCDC136-204ENST00000460941 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
CCDC136-204ENST00000460941 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
CCDC136-204ENST00000460941 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
CCDC136-204ENST00000460941 FBLN2P98095 1184 aa20.96■□□□□ 0.95
CCDC136-204ENST00000460941 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
CCDC136-204ENST00000460941 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
CCDC136-204ENST00000460941 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
CCDC136-204ENST00000460941 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
CCDC136-204ENST00000460941 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
CCDC136-204ENST00000460941 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
CCDC136-204ENST00000460941 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.92
CCDC136-204ENST00000460941 CUL7Q14999 1698 aa20.8■□□□□ 0.92
CCDC136-204ENST00000460941 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
CCDC136-204ENST00000460941 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
CCDC136-204ENST00000460941 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
CCDC136-204ENST00000460941 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
CCDC136-204ENST00000460941 TRIM41Q8WV44 630 aa20.77■□□□□ 0.92
CCDC136-204ENST00000460941 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
CCDC136-204ENST00000460941 IGF1RP08069 1367 aa20.74■□□□□ 0.91
CCDC136-204ENST00000460941 NUP160Q12769 1436 aa20.73■□□□□ 0.91
CCDC136-204ENST00000460941 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
CCDC136-204ENST00000460941 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
CCDC136-204ENST00000460941 SHROOM2Q13796 1616 aa20.61■□□□□ 0.89
CCDC136-204ENST00000460941 ARAP1Q96P48 1450 aa20.6■□□□□ 0.89
CCDC136-204ENST00000460941 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
CCDC136-204ENST00000460941 KIAA0586Q9BVV6 1533 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms