RNA–Protein interactions for RNA: ENST00000460887.1

AMPH-205, Transcript of amphiphysin, humanhuman

TSL 3

Gene AMPH, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-205ENST00000460887 NISCHQ9Y2I1 1504 aa41.8■■■■■ 4.28
AMPH-205ENST00000460887 CCDC180Q9P1Z9 1646 aa37.04■■■■□ 3.52
AMPH-205ENST00000460887 ABCC9O60706 1549 aa35.48■■■■□ 3.27
AMPH-205ENST00000460887 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
AMPH-205ENST00000460887 DCAF1Q9Y4B6 1507 aa34.7■■■■□ 3.14
AMPH-205ENST00000460887 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
AMPH-205ENST00000460887 NACADO15069 1562 aa34.62■■■■□ 3.13
AMPH-205ENST00000460887 RB1CC1Q8TDY2 1594 aa34.52■■■■□ 3.12
AMPH-205ENST00000460887 DCAF8L2P0C7V8 631 aa34.49■■■■□ 3.11
AMPH-205ENST00000460887 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
AMPH-205ENST00000460887 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
AMPH-205ENST00000460887 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
AMPH-205ENST00000460887 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
AMPH-205ENST00000460887 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
AMPH-205ENST00000460887 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
AMPH-205ENST00000460887 CECR2Q9BXF3 1484 aa32.43■■■□□ 2.78
AMPH-205ENST00000460887 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
AMPH-205ENST00000460887 SMARCA4P51532 1647 aa32.35■■■□□ 2.77
AMPH-205ENST00000460887 CC2D2AQ9P2K1 1620 aa32.21■■■□□ 2.75
AMPH-205ENST00000460887 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
AMPH-205ENST00000460887 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
AMPH-205ENST00000460887 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
AMPH-205ENST00000460887 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.72
AMPH-205ENST00000460887 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
AMPH-205ENST00000460887 DNAJC5BQ9UF47 199 aa31.97■■■□□ 2.71
AMPH-205ENST00000460887 WIZO95785 1651 aa31.9■■■□□ 2.7
AMPH-205ENST00000460887 NCAPD3P42695 1498 aa31.9■■■□□ 2.7
AMPH-205ENST00000460887 HMGXB3Q12766 1538 aa31.85■■■□□ 2.69
AMPH-205ENST00000460887 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
AMPH-205ENST00000460887 TOP2AP11388 1531 aaKnown RBP31.63■■■□□ 2.65
AMPH-205ENST00000460887 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
AMPH-205ENST00000460887 CCDC88BA6NC98 1476 aa31.19■■■□□ 2.58
AMPH-205ENST00000460887 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
AMPH-205ENST00000460887 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
AMPH-205ENST00000460887 CFTRP13569 1480 aa30.93■■■□□ 2.54
AMPH-205ENST00000460887 PRDM2Q13029 1718 aa30.9■■■□□ 2.54
AMPH-205ENST00000460887 NESP48681 1621 aa30.87■■■□□ 2.53
AMPH-205ENST00000460887 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
AMPH-205ENST00000460887 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
AMPH-205ENST00000460887 FANCD2Q9BXW9 1451 aa30.61■■■□□ 2.49
AMPH-205ENST00000460887 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
AMPH-205ENST00000460887 CEP164Q9UPV0 1460 aa30.54■■■□□ 2.48
AMPH-205ENST00000460887 THOC2Q8NI27 1593 aaKnown RBP30.4■■■□□ 2.46
AMPH-205ENST00000460887 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
AMPH-205ENST00000460887 WDR62O43379 1518 aa30.3■■■□□ 2.44
AMPH-205ENST00000460887 ABCC8Q09428 1581 aa30.29■■■□□ 2.44
AMPH-205ENST00000460887 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
AMPH-205ENST00000460887 DNMBPQ6XZF7 1577 aa30.26■■■□□ 2.43
AMPH-205ENST00000460887 TOPBP1Q92547 1522 aa30.2■■■□□ 2.42
AMPH-205ENST00000460887 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
AMPH-205ENST00000460887 CUX1P39880 1505 aa30.17■■■□□ 2.42
AMPH-205ENST00000460887 BIVM-ERCC5R4GMW8 1640 aa30.15■■■□□ 2.42
AMPH-205ENST00000460887 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
AMPH-205ENST00000460887 CUX2O14529 1486 aa30.11■■■□□ 2.41
AMPH-205ENST00000460887 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
AMPH-205ENST00000460887 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
AMPH-205ENST00000460887 POLA1P09884 1462 aaPredicted RBP29.97■■■□□ 2.39
AMPH-205ENST00000460887 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
AMPH-205ENST00000460887 TARBP1Q13395 1621 aaKnown RBP29.87■■■□□ 2.37
AMPH-205ENST00000460887 SOGA1O94964 1423 aa29.83■■■□□ 2.37
AMPH-205ENST00000460887 WDR97A6NE52 1622 aa29.82■■■□□ 2.36
AMPH-205ENST00000460887 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
AMPH-205ENST00000460887 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
AMPH-205ENST00000460887 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
AMPH-205ENST00000460887 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
AMPH-205ENST00000460887 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.33
AMPH-205ENST00000460887 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
AMPH-205ENST00000460887 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
AMPH-205ENST00000460887 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
AMPH-205ENST00000460887 GAPVD1Q14C86 1478 aa29.53■■■□□ 2.32
AMPH-205ENST00000460887 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.32
AMPH-205ENST00000460887 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
AMPH-205ENST00000460887 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
AMPH-205ENST00000460887 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
AMPH-205ENST00000460887 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
AMPH-205ENST00000460887 EEA1Q15075 1411 aa29.39■■■□□ 2.3
AMPH-205ENST00000460887 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
AMPH-205ENST00000460887 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
AMPH-205ENST00000460887 CUL7Q14999 1698 aa29.32■■■□□ 2.28
AMPH-205ENST00000460887 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
AMPH-205ENST00000460887 IGF1RP08069 1367 aa29.28■■■□□ 2.28
AMPH-205ENST00000460887 ADAMTS12P58397 1594 aa29.28■■■□□ 2.28
AMPH-205ENST00000460887 FHAD1B1AJZ9 1412 aa29.21■■■□□ 2.27
AMPH-205ENST00000460887 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
AMPH-205ENST00000460887 CHD1O14646 1710 aa29.17■■■□□ 2.26
AMPH-205ENST00000460887 CSRNP3Q8WYN3 585 aa29.16■■■□□ 2.26
AMPH-205ENST00000460887 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
AMPH-205ENST00000460887 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
AMPH-205ENST00000460887 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
AMPH-205ENST00000460887 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
AMPH-205ENST00000460887 KIF21BO75037 1637 aa29.06■■■□□ 2.24
AMPH-205ENST00000460887 RAPGEF2Q9Y4G8 1499 aa29.06■■■□□ 2.24
AMPH-205ENST00000460887 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
AMPH-205ENST00000460887 FBLN2P98095 1184 aa28.99■■■□□ 2.23
AMPH-205ENST00000460887 NUP160Q12769 1436 aa28.93■■■□□ 2.22
AMPH-205ENST00000460887 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
AMPH-205ENST00000460887 CTTNBP2Q8WZ74 1663 aa28.87■■■□□ 2.21
AMPH-205ENST00000460887 GOLGA3Q08378 1498 aa28.87■■■□□ 2.21
AMPH-205ENST00000460887 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
AMPH-205ENST00000460887 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms