RNA–Protein interactions for RNA: ENST00000460841.1

C4A-245, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-245ENST00000460841 NISCHQ9Y2I1 1504 aa38.81■■■■□ 3.8
C4A-245ENST00000460841 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
C4A-245ENST00000460841 ABCC9O60706 1549 aa34.45■■■■□ 3.1
C4A-245ENST00000460841 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
C4A-245ENST00000460841 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
C4A-245ENST00000460841 NACADO15069 1562 aa32.68■■■□□ 2.82
C4A-245ENST00000460841 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
C4A-245ENST00000460841 MYO15BQ96JP2 1530 aa32.3■■■□□ 2.76
C4A-245ENST00000460841 ZCCHC6Q5VYS8 1495 aaKnown RBP32.21■■■□□ 2.75
C4A-245ENST00000460841 PABPN1Q86U42 306 aaKnown RBP eCLIP32.18■■■□□ 2.74
C4A-245ENST00000460841 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
C4A-245ENST00000460841 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.72
C4A-245ENST00000460841 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
C4A-245ENST00000460841 SCRIBQ14160 1630 aa31.64■■■□□ 2.66
C4A-245ENST00000460841 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
C4A-245ENST00000460841 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
C4A-245ENST00000460841 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
C4A-245ENST00000460841 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
C4A-245ENST00000460841 NCAPD3P42695 1498 aa30.2■■■□□ 2.43
C4A-245ENST00000460841 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
C4A-245ENST00000460841 ATAD2BQ9ULI0 1458 aa30.17■■■□□ 2.42
C4A-245ENST00000460841 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
C4A-245ENST00000460841 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
C4A-245ENST00000460841 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
C4A-245ENST00000460841 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
C4A-245ENST00000460841 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
C4A-245ENST00000460841 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
C4A-245ENST00000460841 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
C4A-245ENST00000460841 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
C4A-245ENST00000460841 NESP48681 1621 aa29.69■■■□□ 2.34
C4A-245ENST00000460841 CUX2O14529 1486 aa29.67■■■□□ 2.34
C4A-245ENST00000460841 WIZO95785 1651 aa29.6■■■□□ 2.33
C4A-245ENST00000460841 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
C4A-245ENST00000460841 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
C4A-245ENST00000460841 CADPSQ9ULU8 1353 aa29.32■■■□□ 2.28
C4A-245ENST00000460841 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
C4A-245ENST00000460841 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
C4A-245ENST00000460841 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
C4A-245ENST00000460841 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
C4A-245ENST00000460841 CFTRP13569 1480 aa29.03■■■□□ 2.24
C4A-245ENST00000460841 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
C4A-245ENST00000460841 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
C4A-245ENST00000460841 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
C4A-245ENST00000460841 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
C4A-245ENST00000460841 WDR62O43379 1518 aa28.91■■■□□ 2.22
C4A-245ENST00000460841 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
C4A-245ENST00000460841 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
C4A-245ENST00000460841 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
C4A-245ENST00000460841 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
C4A-245ENST00000460841 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
C4A-245ENST00000460841 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
C4A-245ENST00000460841 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
C4A-245ENST00000460841 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
C4A-245ENST00000460841 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
C4A-245ENST00000460841 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
C4A-245ENST00000460841 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
C4A-245ENST00000460841 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
C4A-245ENST00000460841 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
C4A-245ENST00000460841 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
C4A-245ENST00000460841 RAD54L2Q9Y4B4 1467 aa28.14■■■□□ 2.09
C4A-245ENST00000460841 SOGA1O94964 1423 aa28.1■■■□□ 2.09
C4A-245ENST00000460841 CUX1P39880 1505 aa28.1■■■□□ 2.09
C4A-245ENST00000460841 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
C4A-245ENST00000460841 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
C4A-245ENST00000460841 RIMBP3CA6NJZ7 1639 aa27.94■■■□□ 2.06
C4A-245ENST00000460841 RIMBP3BA6NNM3 1639 aa27.94■■■□□ 2.06
C4A-245ENST00000460841 RIMBP3Q9UFD9 1639 aa27.94■■■□□ 2.06
C4A-245ENST00000460841 FBLN2P98095 1184 aa27.94■■■□□ 2.06
C4A-245ENST00000460841 CHD1O14646 1710 aa27.89■■■□□ 2.06
C4A-245ENST00000460841 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
C4A-245ENST00000460841 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
C4A-245ENST00000460841 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
C4A-245ENST00000460841 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
C4A-245ENST00000460841 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
C4A-245ENST00000460841 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
C4A-245ENST00000460841 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
C4A-245ENST00000460841 ABCA10Q8WWZ4 1543 aa27.74■■■□□ 2.03
C4A-245ENST00000460841 GAPVD1Q14C86 1478 aa27.74■■■□□ 2.03
C4A-245ENST00000460841 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
C4A-245ENST00000460841 SYNJ1O43426 1573 aa27.7■■■□□ 2.03
C4A-245ENST00000460841 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
C4A-245ENST00000460841 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
C4A-245ENST00000460841 PBRM1Q86U86 1689 aa27.67■■■□□ 2.02
C4A-245ENST00000460841 ABCA5Q8WWZ7 1642 aa27.66■■■□□ 2.02
C4A-245ENST00000460841 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
C4A-245ENST00000460841 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
C4A-245ENST00000460841 TRHP20396 242 aaPredicted RBP27.55■■■□□ 2
C4A-245ENST00000460841 ARAP1Q96P48 1450 aa27.55■■■□□ 2
C4A-245ENST00000460841 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
C4A-245ENST00000460841 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
C4A-245ENST00000460841 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.97
C4A-245ENST00000460841 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
C4A-245ENST00000460841 CEP170Q5SW79 1584 aa27.32■■□□□ 1.96
C4A-245ENST00000460841 NUP160Q12769 1436 aa27.32■■□□□ 1.96
C4A-245ENST00000460841 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
C4A-245ENST00000460841 IGF1RP08069 1367 aa27.19■■□□□ 1.94
C4A-245ENST00000460841 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
C4A-245ENST00000460841 SHROOM2Q13796 1616 aa27.14■■□□□ 1.94
C4A-245ENST00000460841 JPH4Q96JJ6 628 aa27.12■■□□□ 1.93
C4A-245ENST00000460841 PRG4Q92954 1404 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms