RNA–Protein interactions for RNA: ENST00000460834.1

LST1-218, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-218ENST00000460834 NISCHQ9Y2I1 1504 aa46.92■■■■■ 5.1
LST1-218ENST00000460834 CCDC180Q9P1Z9 1646 aa41.84■■■■■ 4.29
LST1-218ENST00000460834 ABCC9O60706 1549 aa41.17■■■■■ 4.18
LST1-218ENST00000460834 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
LST1-218ENST00000460834 NACADO15069 1562 aa39.37■■■■□ 3.89
LST1-218ENST00000460834 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
LST1-218ENST00000460834 MYO15BQ96JP2 1530 aa39.04■■■■□ 3.84
LST1-218ENST00000460834 ZCCHC6Q5VYS8 1495 aaKnown RBP39■■■■□ 3.83
LST1-218ENST00000460834 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
LST1-218ENST00000460834 UNC13AQ9UPW8 1703 aa38.74■■■■□ 3.79
LST1-218ENST00000460834 PABPN1Q86U42 306 aaKnown RBP eCLIP38.44■■■■□ 3.74
LST1-218ENST00000460834 BICRAQ9NZM4 1560 aa38.4■■■■□ 3.74
LST1-218ENST00000460834 DNAJC5BQ9UF47 199 aa38.16■■■■□ 3.7
LST1-218ENST00000460834 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
LST1-218ENST00000460834 SHROOM4Q9ULL8 1493 aa37.81■■■■□ 3.64
LST1-218ENST00000460834 EIF4G1Q04637 1599 aaKnown RBP37.33■■■■□ 3.57
LST1-218ENST00000460834 CC2D2AQ9P2K1 1620 aa37.26■■■■□ 3.56
LST1-218ENST00000460834 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.51
LST1-218ENST00000460834 SMARCA4P51532 1647 aa36.47■■■■□ 3.43
LST1-218ENST00000460834 NCAPD3P42695 1498 aa36.35■■■■□ 3.41
LST1-218ENST00000460834 BAZ1AQ9NRL2 1556 aaPredicted RBP36.33■■■■□ 3.41
LST1-218ENST00000460834 ATAD2BQ9ULI0 1458 aa36.32■■■■□ 3.41
LST1-218ENST00000460834 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
LST1-218ENST00000460834 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
LST1-218ENST00000460834 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
LST1-218ENST00000460834 HMGXB3Q12766 1538 aa36.11■■■■□ 3.37
LST1-218ENST00000460834 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
LST1-218ENST00000460834 WIZO95785 1651 aa35.8■■■■□ 3.32
LST1-218ENST00000460834 RSF1Q96T23 1441 aaPredicted RBP35.65■■■■□ 3.3
LST1-218ENST00000460834 NESP48681 1621 aa35.59■■■■□ 3.29
LST1-218ENST00000460834 ERCC6Q03468 1493 aa35.41■■■■□ 3.26
LST1-218ENST00000460834 LAMC3Q9Y6N6 1575 aa35.41■■■■□ 3.26
LST1-218ENST00000460834 TOP2AP11388 1531 aaKnown RBP35.33■■■■□ 3.25
LST1-218ENST00000460834 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
LST1-218ENST00000460834 CUX2O14529 1486 aa35.19■■■■□ 3.22
LST1-218ENST00000460834 KIF21AQ7Z4S6 1674 aa35.19■■■■□ 3.22
LST1-218ENST00000460834 PDS5BQ9NTI5 1447 aa35.13■■■■□ 3.21
LST1-218ENST00000460834 THOC2Q8NI27 1593 aaKnown RBP35.1■■■■□ 3.21
LST1-218ENST00000460834 CFTRP13569 1480 aa35■■■■□ 3.19
LST1-218ENST00000460834 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
LST1-218ENST00000460834 FANCD2Q9BXW9 1451 aa34.84■■■■□ 3.17
LST1-218ENST00000460834 MRC2Q9UBG0 1479 aa34.82■■■■□ 3.16
LST1-218ENST00000460834 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
LST1-218ENST00000460834 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
LST1-218ENST00000460834 WDR62O43379 1518 aa34.74■■■■□ 3.15
LST1-218ENST00000460834 URB2Q14146 1524 aaKnown RBP34.56■■■■□ 3.12
LST1-218ENST00000460834 DNAJC5Q9H3Z4 198 aa34.5■■■■□ 3.11
LST1-218ENST00000460834 SUPT5HO00267 1087 aaKnown RBP34.48■■■■□ 3.11
LST1-218ENST00000460834 TOPBP1Q92547 1522 aa34.28■■■■□ 3.08
LST1-218ENST00000460834 ABCC8Q09428 1581 aa34.21■■■■□ 3.07
LST1-218ENST00000460834 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.07
LST1-218ENST00000460834 IFT140Q96RY7 1462 aa34.09■■■■□ 3.05
LST1-218ENST00000460834 ZNF608Q9ULD9 1512 aaPredicted RBP34.03■■■■□ 3.04
LST1-218ENST00000460834 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
LST1-218ENST00000460834 POLA1P09884 1462 aaPredicted RBP33.96■■■■□ 3.03
LST1-218ENST00000460834 CUX1P39880 1505 aa33.94■■■■□ 3.02
LST1-218ENST00000460834 RAD54L2Q9Y4B4 1467 aa33.85■■■■□ 3.01
LST1-218ENST00000460834 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
LST1-218ENST00000460834 FGD5Q6ZNL6 1462 aa33.83■■■■□ 3.01
LST1-218ENST00000460834 SOGA1O94964 1423 aa33.8■■■■□ 3
LST1-218ENST00000460834 AQRO60306 1485 aaKnown RBP eCLIP33.79■■■■□ 3
LST1-218ENST00000460834 OSCARQ8IYS5 282 aa33.7■■■□□ 2.99
LST1-218ENST00000460834 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
LST1-218ENST00000460834 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
LST1-218ENST00000460834 BIVM-ERCC5R4GMW8 1640 aa33.59■■■□□ 2.97
LST1-218ENST00000460834 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
LST1-218ENST00000460834 SYNJ1O43426 1573 aa33.56■■■□□ 2.96
LST1-218ENST00000460834 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.96
LST1-218ENST00000460834 CHD1O14646 1710 aa33.53■■■□□ 2.96
LST1-218ENST00000460834 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
LST1-218ENST00000460834 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
LST1-218ENST00000460834 SNAPC4Q5SXM2 1469 aa33.42■■■□□ 2.94
LST1-218ENST00000460834 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
LST1-218ENST00000460834 PBRM1Q86U86 1689 aa33.41■■■□□ 2.94
LST1-218ENST00000460834 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
LST1-218ENST00000460834 MAGI1Q96QZ7 1491 aaPredicted RBP33.36■■■□□ 2.93
LST1-218ENST00000460834 FBLN2P98095 1184 aa33.35■■■□□ 2.93
LST1-218ENST00000460834 RIMBP3CA6NJZ7 1639 aa33.25■■■□□ 2.91
LST1-218ENST00000460834 RIMBP3BA6NNM3 1639 aa33.25■■■□□ 2.91
LST1-218ENST00000460834 RIMBP3Q9UFD9 1639 aa33.25■■■□□ 2.91
LST1-218ENST00000460834 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
LST1-218ENST00000460834 CHMP7Q8WUX9 453 aaPredicted RBP33.23■■■□□ 2.91
LST1-218ENST00000460834 TRIM41Q8WV44 630 aa33.17■■■□□ 2.9
LST1-218ENST00000460834 ARHGEF11O15085 1522 aa33.17■■■□□ 2.9
LST1-218ENST00000460834 CLASP1Q7Z460 1538 aa33.13■■■□□ 2.89
LST1-218ENST00000460834 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
LST1-218ENST00000460834 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.89
LST1-218ENST00000460834 GRIN2AQ12879 1464 aa33■■■□□ 2.87
LST1-218ENST00000460834 FHAD1B1AJZ9 1412 aa33■■■□□ 2.87
LST1-218ENST00000460834 ARAP1Q96P48 1450 aa32.9■■■□□ 2.86
LST1-218ENST00000460834 CEP170Q5SW79 1584 aa32.9■■■□□ 2.86
LST1-218ENST00000460834 NUP160Q12769 1436 aa32.89■■■□□ 2.86
LST1-218ENST00000460834 CYB5RLQ6IPT4 315 aa32.87■■■□□ 2.85
LST1-218ENST00000460834 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
LST1-218ENST00000460834 IGF1RP08069 1367 aa32.84■■■□□ 2.85
LST1-218ENST00000460834 CUL7Q14999 1698 aa32.72■■■□□ 2.83
LST1-218ENST00000460834 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
LST1-218ENST00000460834 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.82
LST1-218ENST00000460834 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
LST1-218ENST00000460834 CARMIL1Q5VZK9 1371 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms