RNA–Protein interactions for RNA: ENST00000460782.1

ARHGAP4-213, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 3

Gene ARHGAP4, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-213ENST00000460782 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
ARHGAP4-213ENST00000460782 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
ARHGAP4-213ENST00000460782 ABCC9O60706 1549 aa34.25■■■■□ 3.07
ARHGAP4-213ENST00000460782 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
ARHGAP4-213ENST00000460782 NACADO15069 1562 aa32.7■■■□□ 2.83
ARHGAP4-213ENST00000460782 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
ARHGAP4-213ENST00000460782 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
ARHGAP4-213ENST00000460782 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
ARHGAP4-213ENST00000460782 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
ARHGAP4-213ENST00000460782 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
ARHGAP4-213ENST00000460782 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
ARHGAP4-213ENST00000460782 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
ARHGAP4-213ENST00000460782 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
ARHGAP4-213ENST00000460782 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
ARHGAP4-213ENST00000460782 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
ARHGAP4-213ENST00000460782 EIF4G1Q04637 1599 aaKnown RBP31.02■■■□□ 2.56
ARHGAP4-213ENST00000460782 CC2D2AQ9P2K1 1620 aa30.97■■■□□ 2.55
ARHGAP4-213ENST00000460782 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.53
ARHGAP4-213ENST00000460782 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
ARHGAP4-213ENST00000460782 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
ARHGAP4-213ENST00000460782 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
ARHGAP4-213ENST00000460782 BAZ1AQ9NRL2 1556 aaPredicted RBP30.14■■■□□ 2.42
ARHGAP4-213ENST00000460782 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
ARHGAP4-213ENST00000460782 HMGXB3Q12766 1538 aa30■■■□□ 2.39
ARHGAP4-213ENST00000460782 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
ARHGAP4-213ENST00000460782 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
ARHGAP4-213ENST00000460782 BAZ1BQ9UIG0 1483 aaKnown RBP29.87■■■□□ 2.37
ARHGAP4-213ENST00000460782 WIZO95785 1651 aa29.6■■■□□ 2.33
ARHGAP4-213ENST00000460782 NESP48681 1621 aa29.56■■■□□ 2.32
ARHGAP4-213ENST00000460782 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
ARHGAP4-213ENST00000460782 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
ARHGAP4-213ENST00000460782 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
ARHGAP4-213ENST00000460782 CUX2O14529 1486 aa29.37■■■□□ 2.29
ARHGAP4-213ENST00000460782 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
ARHGAP4-213ENST00000460782 TOP2AP11388 1531 aaKnown RBP29.27■■■□□ 2.28
ARHGAP4-213ENST00000460782 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
ARHGAP4-213ENST00000460782 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
ARHGAP4-213ENST00000460782 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
ARHGAP4-213ENST00000460782 CFTRP13569 1480 aa29.04■■■□□ 2.24
ARHGAP4-213ENST00000460782 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
ARHGAP4-213ENST00000460782 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
ARHGAP4-213ENST00000460782 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
ARHGAP4-213ENST00000460782 CEP164Q9UPV0 1460 aa28.93■■■□□ 2.22
ARHGAP4-213ENST00000460782 WDR62O43379 1518 aa28.89■■■□□ 2.21
ARHGAP4-213ENST00000460782 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
ARHGAP4-213ENST00000460782 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
ARHGAP4-213ENST00000460782 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
ARHGAP4-213ENST00000460782 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
ARHGAP4-213ENST00000460782 TOPBP1Q92547 1522 aa28.45■■■□□ 2.15
ARHGAP4-213ENST00000460782 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
ARHGAP4-213ENST00000460782 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
ARHGAP4-213ENST00000460782 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
ARHGAP4-213ENST00000460782 ZNF608Q9ULD9 1512 aaPredicted RBP28.25■■■□□ 2.11
ARHGAP4-213ENST00000460782 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
ARHGAP4-213ENST00000460782 TARBP1Q13395 1621 aaKnown RBP28.16■■■□□ 2.1
ARHGAP4-213ENST00000460782 CUX1P39880 1505 aa28.12■■■□□ 2.09
ARHGAP4-213ENST00000460782 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
ARHGAP4-213ENST00000460782 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
ARHGAP4-213ENST00000460782 SOGA1O94964 1423 aa28.07■■■□□ 2.08
ARHGAP4-213ENST00000460782 RAD54L2Q9Y4B4 1467 aa28.07■■■□□ 2.08
ARHGAP4-213ENST00000460782 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
ARHGAP4-213ENST00000460782 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.081e-6■■■■□ 22.8
ARHGAP4-213ENST00000460782 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
ARHGAP4-213ENST00000460782 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
ARHGAP4-213ENST00000460782 CHD1O14646 1710 aa27.81■■■□□ 2.04
ARHGAP4-213ENST00000460782 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
ARHGAP4-213ENST00000460782 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
ARHGAP4-213ENST00000460782 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
ARHGAP4-213ENST00000460782 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
ARHGAP4-213ENST00000460782 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
ARHGAP4-213ENST00000460782 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
ARHGAP4-213ENST00000460782 FBLN2P98095 1184 aa27.76■■■□□ 2.03
ARHGAP4-213ENST00000460782 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
ARHGAP4-213ENST00000460782 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
ARHGAP4-213ENST00000460782 MAGI1Q96QZ7 1491 aaPredicted RBP27.74■■■□□ 2.03
ARHGAP4-213ENST00000460782 GAPVD1Q14C86 1478 aa27.73■■■□□ 2.03
ARHGAP4-213ENST00000460782 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
ARHGAP4-213ENST00000460782 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
ARHGAP4-213ENST00000460782 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
ARHGAP4-213ENST00000460782 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
ARHGAP4-213ENST00000460782 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
ARHGAP4-213ENST00000460782 ARHGEF11O15085 1522 aa27.64■■■□□ 2.02
ARHGAP4-213ENST00000460782 CHMP7Q8WUX9 453 aaPredicted RBP27.64■■■□□ 2.02
ARHGAP4-213ENST00000460782 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
ARHGAP4-213ENST00000460782 CLASP1Q7Z460 1538 aa27.53■■■□□ 2
ARHGAP4-213ENST00000460782 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
ARHGAP4-213ENST00000460782 ERICH3Q5RHP9 1530 aa27.45■■□□□ 1.98
ARHGAP4-213ENST00000460782 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
ARHGAP4-213ENST00000460782 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
ARHGAP4-213ENST00000460782 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
ARHGAP4-213ENST00000460782 CYB5RLQ6IPT4 315 aa27.4■■□□□ 1.98
ARHGAP4-213ENST00000460782 NUP160Q12769 1436 aa27.32■■□□□ 1.96
ARHGAP4-213ENST00000460782 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
ARHGAP4-213ENST00000460782 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
ARHGAP4-213ENST00000460782 IGF1RP08069 1367 aa27.21■■□□□ 1.95
ARHGAP4-213ENST00000460782 SHROOM2Q13796 1616 aa27.15■■□□□ 1.94
ARHGAP4-213ENST00000460782 CUL7Q14999 1698 aa27.12■■□□□ 1.93
ARHGAP4-213ENST00000460782 ERCC6L2Q5T890 1561 aa27.12■■□□□ 1.93
ARHGAP4-213ENST00000460782 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
ARHGAP4-213ENST00000460782 JPH4Q96JJ6 628 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms