RNA–Protein interactions for RNA: ENST00000460721.1

LDOC1-202, Transcript of LDOC1, regulator of NFKB signaling, humanhuman

TSL 1 (best)

Gene LDOC1, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDOC1-202ENST00000460721 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.64
LDOC1-202ENST00000460721 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
LDOC1-202ENST00000460721 ABCC9O60706 1549 aa33■■■□□ 2.87
LDOC1-202ENST00000460721 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
LDOC1-202ENST00000460721 NACADO15069 1562 aa31.69■■■□□ 2.66
LDOC1-202ENST00000460721 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
LDOC1-202ENST00000460721 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
LDOC1-202ENST00000460721 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
LDOC1-202ENST00000460721 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
LDOC1-202ENST00000460721 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
LDOC1-202ENST00000460721 DNAJC5BQ9UF47 199 aa30.97■■■□□ 2.55
LDOC1-202ENST00000460721 BICRAQ9NZM4 1560 aa30.84■■■□□ 2.53
LDOC1-202ENST00000460721 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
LDOC1-202ENST00000460721 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
LDOC1-202ENST00000460721 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
LDOC1-202ENST00000460721 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
LDOC1-202ENST00000460721 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.37
LDOC1-202ENST00000460721 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
LDOC1-202ENST00000460721 SMARCA4P51532 1647 aa29.35■■■□□ 2.29
LDOC1-202ENST00000460721 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
LDOC1-202ENST00000460721 NCAPD3P42695 1498 aa29.27■■■□□ 2.28
LDOC1-202ENST00000460721 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
LDOC1-202ENST00000460721 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
LDOC1-202ENST00000460721 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
LDOC1-202ENST00000460721 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
LDOC1-202ENST00000460721 HMGXB3Q12766 1538 aa29.1■■■□□ 2.25
LDOC1-202ENST00000460721 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
LDOC1-202ENST00000460721 WIZO95785 1651 aa28.8■■■□□ 2.2
LDOC1-202ENST00000460721 DNAJC5Q9H3Z4 198 aa28.78■■■□□ 2.2
LDOC1-202ENST00000460721 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
LDOC1-202ENST00000460721 NESP48681 1621 aa28.54■■■□□ 2.16
LDOC1-202ENST00000460721 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
LDOC1-202ENST00000460721 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
LDOC1-202ENST00000460721 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
LDOC1-202ENST00000460721 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
LDOC1-202ENST00000460721 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.12
LDOC1-202ENST00000460721 CUX2O14529 1486 aa28.25■■■□□ 2.11
LDOC1-202ENST00000460721 KIF21AQ7Z4S6 1674 aa28.22■■■□□ 2.11
LDOC1-202ENST00000460721 CFTRP13569 1480 aa28.2■■■□□ 2.1
LDOC1-202ENST00000460721 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
LDOC1-202ENST00000460721 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
LDOC1-202ENST00000460721 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
LDOC1-202ENST00000460721 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
LDOC1-202ENST00000460721 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
LDOC1-202ENST00000460721 CEP164Q9UPV0 1460 aa27.97■■■□□ 2.07
LDOC1-202ENST00000460721 WDR62O43379 1518 aa27.93■■■□□ 2.06
LDOC1-202ENST00000460721 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
LDOC1-202ENST00000460721 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
LDOC1-202ENST00000460721 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
LDOC1-202ENST00000460721 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
LDOC1-202ENST00000460721 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
LDOC1-202ENST00000460721 IFT140Q96RY7 1462 aa27.43■■□□□ 1.98
LDOC1-202ENST00000460721 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
LDOC1-202ENST00000460721 TARBP1Q13395 1621 aaKnown RBP27.32■■□□□ 1.96
LDOC1-202ENST00000460721 CUX1P39880 1505 aa27.31■■□□□ 1.96
LDOC1-202ENST00000460721 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
LDOC1-202ENST00000460721 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
LDOC1-202ENST00000460721 FGD5Q6ZNL6 1462 aa27.23■■□□□ 1.95
LDOC1-202ENST00000460721 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.95
LDOC1-202ENST00000460721 SOGA1O94964 1423 aa27.2■■□□□ 1.94
LDOC1-202ENST00000460721 EIF4G3O43432 1585 aaKnown RBP27.19■■□□□ 1.94
LDOC1-202ENST00000460721 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
LDOC1-202ENST00000460721 WDR97A6NE52 1622 aa27.1■■□□□ 1.93
LDOC1-202ENST00000460721 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
LDOC1-202ENST00000460721 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
LDOC1-202ENST00000460721 TOP2BQ02880 1626 aa27.06■■□□□ 1.92
LDOC1-202ENST00000460721 TDRD9Q8NDG6 1382 aaKnown RBP27.05■■□□□ 1.92
LDOC1-202ENST00000460721 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
LDOC1-202ENST00000460721 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
LDOC1-202ENST00000460721 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
LDOC1-202ENST00000460721 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
LDOC1-202ENST00000460721 GRIN2BQ13224 1484 aa26.9■■□□□ 1.9
LDOC1-202ENST00000460721 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
LDOC1-202ENST00000460721 CHD1O14646 1710 aa26.88■■□□□ 1.89
LDOC1-202ENST00000460721 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
LDOC1-202ENST00000460721 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
LDOC1-202ENST00000460721 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
LDOC1-202ENST00000460721 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
LDOC1-202ENST00000460721 FBLN2P98095 1184 aa26.73■■□□□ 1.87
LDOC1-202ENST00000460721 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
LDOC1-202ENST00000460721 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
LDOC1-202ENST00000460721 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
LDOC1-202ENST00000460721 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
LDOC1-202ENST00000460721 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
LDOC1-202ENST00000460721 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
LDOC1-202ENST00000460721 CLASP1Q7Z460 1538 aa26.62■■□□□ 1.85
LDOC1-202ENST00000460721 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
LDOC1-202ENST00000460721 FHAD1B1AJZ9 1412 aa26.58■■□□□ 1.85
LDOC1-202ENST00000460721 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
LDOC1-202ENST00000460721 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
LDOC1-202ENST00000460721 NUP160Q12769 1436 aa26.48■■□□□ 1.83
LDOC1-202ENST00000460721 IGF1RP08069 1367 aa26.47■■□□□ 1.83
LDOC1-202ENST00000460721 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
LDOC1-202ENST00000460721 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
LDOC1-202ENST00000460721 CUL7Q14999 1698 aa26.38■■□□□ 1.81
LDOC1-202ENST00000460721 CYB5RLQ6IPT4 315 aa26.32■■□□□ 1.8
LDOC1-202ENST00000460721 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
LDOC1-202ENST00000460721 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
LDOC1-202ENST00000460721 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
LDOC1-202ENST00000460721 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms