RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-209ENST00000460628 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
PSMD2-209ENST00000460628 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
PSMD2-209ENST00000460628 ABCC9O60706 1549 aa20.71■□□□□ 0.91
PSMD2-209ENST00000460628 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
PSMD2-209ENST00000460628 NACADO15069 1562 aa19.63■□□□□ 0.73
PSMD2-209ENST00000460628 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
PSMD2-209ENST00000460628 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
PSMD2-209ENST00000460628 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
PSMD2-209ENST00000460628 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
PSMD2-209ENST00000460628 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
PSMD2-209ENST00000460628 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
PSMD2-209ENST00000460628 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
PSMD2-209ENST00000460628 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.65
PSMD2-209ENST00000460628 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
PSMD2-209ENST00000460628 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
PSMD2-209ENST00000460628 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
PSMD2-209ENST00000460628 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
PSMD2-209ENST00000460628 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
PSMD2-209ENST00000460628 NCAPD3P42695 1498 aa18.14■□□□□ 0.5
PSMD2-209ENST00000460628 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
PSMD2-209ENST00000460628 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
PSMD2-209ENST00000460628 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
PSMD2-209ENST00000460628 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
PSMD2-209ENST00000460628 HMGXB3Q12766 1538 aa18.02■□□□□ 0.47
PSMD2-209ENST00000460628 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
PSMD2-209ENST00000460628 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
PSMD2-209ENST00000460628 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
PSMD2-209ENST00000460628 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
PSMD2-209ENST00000460628 NESP48681 1621 aa17.8■□□□□ 0.44
PSMD2-209ENST00000460628 CUX2O14529 1486 aa17.79■□□□□ 0.44
PSMD2-209ENST00000460628 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
PSMD2-209ENST00000460628 WIZO95785 1651 aa17.64■□□□□ 0.42
PSMD2-209ENST00000460628 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
PSMD2-209ENST00000460628 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
PSMD2-209ENST00000460628 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
PSMD2-209ENST00000460628 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
PSMD2-209ENST00000460628 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
PSMD2-209ENST00000460628 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
PSMD2-209ENST00000460628 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
PSMD2-209ENST00000460628 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
PSMD2-209ENST00000460628 CFTRP13569 1480 aa17.44■□□□□ 0.38
PSMD2-209ENST00000460628 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
PSMD2-209ENST00000460628 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
PSMD2-209ENST00000460628 WDR62O43379 1518 aa17.41■□□□□ 0.38
PSMD2-209ENST00000460628 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
PSMD2-209ENST00000460628 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
PSMD2-209ENST00000460628 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
PSMD2-209ENST00000460628 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
PSMD2-209ENST00000460628 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
PSMD2-209ENST00000460628 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
PSMD2-209ENST00000460628 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
PSMD2-209ENST00000460628 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
PSMD2-209ENST00000460628 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
PSMD2-209ENST00000460628 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
PSMD2-209ENST00000460628 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
PSMD2-209ENST00000460628 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
PSMD2-209ENST00000460628 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
PSMD2-209ENST00000460628 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.293e-7■■■■■ 33
PSMD2-209ENST00000460628 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
PSMD2-209ENST00000460628 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
PSMD2-209ENST00000460628 SOGA1O94964 1423 aa16.84■□□□□ 0.29
PSMD2-209ENST00000460628 CUX1P39880 1505 aa16.83■□□□□ 0.28
PSMD2-209ENST00000460628 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
PSMD2-209ENST00000460628 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
PSMD2-209ENST00000460628 FBLN2P98095 1184 aa16.74■□□□□ 0.27
PSMD2-209ENST00000460628 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
PSMD2-209ENST00000460628 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
PSMD2-209ENST00000460628 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
PSMD2-209ENST00000460628 RIMBP3CA6NJZ7 1639 aa16.71■□□□□ 0.27
PSMD2-209ENST00000460628 RIMBP3BA6NNM3 1639 aa16.71■□□□□ 0.27
PSMD2-209ENST00000460628 RIMBP3Q9UFD9 1639 aa16.71■□□□□ 0.27
PSMD2-209ENST00000460628 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
PSMD2-209ENST00000460628 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
PSMD2-209ENST00000460628 CHD1O14646 1710 aa16.67■□□□□ 0.26
PSMD2-209ENST00000460628 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
PSMD2-209ENST00000460628 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
PSMD2-209ENST00000460628 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
PSMD2-209ENST00000460628 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
PSMD2-209ENST00000460628 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
PSMD2-209ENST00000460628 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
PSMD2-209ENST00000460628 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
PSMD2-209ENST00000460628 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
PSMD2-209ENST00000460628 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
PSMD2-209ENST00000460628 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
PSMD2-209ENST00000460628 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
PSMD2-209ENST00000460628 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
PSMD2-209ENST00000460628 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
PSMD2-209ENST00000460628 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
PSMD2-209ENST00000460628 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
PSMD2-209ENST00000460628 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
PSMD2-209ENST00000460628 NUP160Q12769 1436 aa16.43■□□□□ 0.22
PSMD2-209ENST00000460628 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
PSMD2-209ENST00000460628 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
PSMD2-209ENST00000460628 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
PSMD2-209ENST00000460628 ERCC6L2Q5T890 1561 aa16.32■□□□□ 0.2
PSMD2-209ENST00000460628 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
PSMD2-209ENST00000460628 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
PSMD2-209ENST00000460628 IGF1RP08069 1367 aa16.26■□□□□ 0.19
PSMD2-209ENST00000460628 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
PSMD2-209ENST00000460628 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms