RNA–Protein interactions for RNA: ENST00000460621.6_PAR_Y

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621_PAR_Y NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
VAMP7-203ENST00000460621_PAR_Y ABCC9O60706 1549 aa24.91■■□□□ 1.58
VAMP7-203ENST00000460621_PAR_Y CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
VAMP7-203ENST00000460621_PAR_Y DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
VAMP7-203ENST00000460621_PAR_Y RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
VAMP7-203ENST00000460621_PAR_Y NACADO15069 1562 aa23.42■■□□□ 1.34
VAMP7-203ENST00000460621_PAR_Y DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
VAMP7-203ENST00000460621_PAR_Y PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
VAMP7-203ENST00000460621_PAR_Y UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
VAMP7-203ENST00000460621_PAR_Y MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
VAMP7-203ENST00000460621_PAR_Y BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
VAMP7-203ENST00000460621_PAR_Y ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
VAMP7-203ENST00000460621_PAR_Y DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
VAMP7-203ENST00000460621_PAR_Y SCRIBQ14160 1630 aa22.61■■□□□ 1.21
VAMP7-203ENST00000460621_PAR_Y SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
VAMP7-203ENST00000460621_PAR_Y CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
VAMP7-203ENST00000460621_PAR_Y CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
VAMP7-203ENST00000460621_PAR_Y EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
VAMP7-203ENST00000460621_PAR_Y NCAPD3P42695 1498 aa21.7■■□□□ 1.06
VAMP7-203ENST00000460621_PAR_Y ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
VAMP7-203ENST00000460621_PAR_Y DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
VAMP7-203ENST00000460621_PAR_Y SMARCA4P51532 1647 aa21.55■■□□□ 1.04
VAMP7-203ENST00000460621_PAR_Y SMARCA2P51531 1590 aa21.47■■□□□ 1.03
VAMP7-203ENST00000460621_PAR_Y HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
VAMP7-203ENST00000460621_PAR_Y NESP48681 1621 aa21.44■■□□□ 1.02
VAMP7-203ENST00000460621_PAR_Y ERCC6Q03468 1493 aa21.4■■□□□ 1.02
VAMP7-203ENST00000460621_PAR_Y BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
VAMP7-203ENST00000460621_PAR_Y CUX2O14529 1486 aa21.39■■□□□ 1.02
VAMP7-203ENST00000460621_PAR_Y MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
VAMP7-203ENST00000460621_PAR_Y BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
VAMP7-203ENST00000460621_PAR_Y PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
VAMP7-203ENST00000460621_PAR_Y THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
VAMP7-203ENST00000460621_PAR_Y LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
VAMP7-203ENST00000460621_PAR_Y WIZO95785 1651 aa21.07■□□□□ 0.96
VAMP7-203ENST00000460621_PAR_Y KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
VAMP7-203ENST00000460621_PAR_Y CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
VAMP7-203ENST00000460621_PAR_Y PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
VAMP7-203ENST00000460621_PAR_Y RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
VAMP7-203ENST00000460621_PAR_Y MRC2Q9UBG0 1479 aa20.87■□□□□ 0.93
VAMP7-203ENST00000460621_PAR_Y WDR62O43379 1518 aa20.83■□□□□ 0.92
VAMP7-203ENST00000460621_PAR_Y CFTRP13569 1480 aa20.78■□□□□ 0.92
VAMP7-203ENST00000460621_PAR_Y FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
VAMP7-203ENST00000460621_PAR_Y TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
VAMP7-203ENST00000460621_PAR_Y CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
VAMP7-203ENST00000460621_PAR_Y URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
VAMP7-203ENST00000460621_PAR_Y CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
VAMP7-203ENST00000460621_PAR_Y TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
VAMP7-203ENST00000460621_PAR_Y OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
VAMP7-203ENST00000460621_PAR_Y PRDM2Q13029 1718 aa20.44■□□□□ 0.86
VAMP7-203ENST00000460621_PAR_Y ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
VAMP7-203ENST00000460621_PAR_Y TOPBP1Q92547 1522 aa20.39■□□□□ 0.85
VAMP7-203ENST00000460621_PAR_Y IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
VAMP7-203ENST00000460621_PAR_Y DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
VAMP7-203ENST00000460621_PAR_Y ABCC8Q09428 1581 aa20.24■□□□□ 0.83
VAMP7-203ENST00000460621_PAR_Y AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
VAMP7-203ENST00000460621_PAR_Y TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
VAMP7-203ENST00000460621_PAR_Y EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
VAMP7-203ENST00000460621_PAR_Y RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
VAMP7-203ENST00000460621_PAR_Y RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
VAMP7-203ENST00000460621_PAR_Y RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
VAMP7-203ENST00000460621_PAR_Y POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
VAMP7-203ENST00000460621_PAR_Y RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
VAMP7-203ENST00000460621_PAR_Y ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
VAMP7-203ENST00000460621_PAR_Y TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
VAMP7-203ENST00000460621_PAR_Y SOGA1O94964 1423 aa20.09■□□□□ 0.81
VAMP7-203ENST00000460621_PAR_Y CHD1O14646 1710 aa20.07■□□□□ 0.8
VAMP7-203ENST00000460621_PAR_Y FBLN2P98095 1184 aa20.05■□□□□ 0.8
VAMP7-203ENST00000460621_PAR_Y CUX1P39880 1505 aa20.05■□□□□ 0.8
VAMP7-203ENST00000460621_PAR_Y FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
VAMP7-203ENST00000460621_PAR_Y CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
VAMP7-203ENST00000460621_PAR_Y ARAP1Q96P48 1450 aa19.98■□□□□ 0.79
VAMP7-203ENST00000460621_PAR_Y SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
VAMP7-203ENST00000460621_PAR_Y SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
VAMP7-203ENST00000460621_PAR_Y CLASP1Q7Z460 1538 aa19.88■□□□□ 0.77
VAMP7-203ENST00000460621_PAR_Y GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
VAMP7-203ENST00000460621_PAR_Y CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
VAMP7-203ENST00000460621_PAR_Y WDR97A6NE52 1622 aa19.87■□□□□ 0.77
VAMP7-203ENST00000460621_PAR_Y MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
VAMP7-203ENST00000460621_PAR_Y SYNJ2O15056 1496 aa19.82■□□□□ 0.76
VAMP7-203ENST00000460621_PAR_Y GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
VAMP7-203ENST00000460621_PAR_Y ABCA10Q8WWZ4 1543 aa19.8■□□□□ 0.76
VAMP7-203ENST00000460621_PAR_Y SYNJ1O43426 1573 aa19.78■□□□□ 0.76
VAMP7-203ENST00000460621_PAR_Y ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
VAMP7-203ENST00000460621_PAR_Y PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
VAMP7-203ENST00000460621_PAR_Y TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
VAMP7-203ENST00000460621_PAR_Y WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
VAMP7-203ENST00000460621_PAR_Y ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
VAMP7-203ENST00000460621_PAR_Y TOP2BQ02880 1626 aa19.65■□□□□ 0.74
VAMP7-203ENST00000460621_PAR_Y GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
VAMP7-203ENST00000460621_PAR_Y BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
VAMP7-203ENST00000460621_PAR_Y ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
VAMP7-203ENST00000460621_PAR_Y CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
VAMP7-203ENST00000460621_PAR_Y NUP160Q12769 1436 aa19.6■□□□□ 0.73
VAMP7-203ENST00000460621_PAR_Y FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
VAMP7-203ENST00000460621_PAR_Y ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
VAMP7-203ENST00000460621_PAR_Y SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
VAMP7-203ENST00000460621_PAR_Y JPH4Q96JJ6 628 aa19.42■□□□□ 0.7
VAMP7-203ENST00000460621_PAR_Y PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
VAMP7-203ENST00000460621_PAR_Y IGF1RP08069 1367 aa19.37■□□□□ 0.69
VAMP7-203ENST00000460621_PAR_Y RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms