RNA–Protein interactions for RNA: ENST00000460605.1

GTPBP1-204, Transcript of GTP binding protein 1, humanhuman

TSL 3

Gene GTPBP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-204ENST00000460605 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
GTPBP1-204ENST00000460605 ABCC9O60706 1549 aa25.24■■□□□ 1.63
GTPBP1-204ENST00000460605 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.57
GTPBP1-204ENST00000460605 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
GTPBP1-204ENST00000460605 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
GTPBP1-204ENST00000460605 NACADO15069 1562 aa23.67■■□□□ 1.38
GTPBP1-204ENST00000460605 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
GTPBP1-204ENST00000460605 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
GTPBP1-204ENST00000460605 UNC13AQ9UPW8 1703 aa23.26■■□□□ 1.31
GTPBP1-204ENST00000460605 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
GTPBP1-204ENST00000460605 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
GTPBP1-204ENST00000460605 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
GTPBP1-204ENST00000460605 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
GTPBP1-204ENST00000460605 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
GTPBP1-204ENST00000460605 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
GTPBP1-204ENST00000460605 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
GTPBP1-204ENST00000460605 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
GTPBP1-204ENST00000460605 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
GTPBP1-204ENST00000460605 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
GTPBP1-204ENST00000460605 CUX2O14529 1486 aa22.03■■□□□ 1.12
GTPBP1-204ENST00000460605 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
GTPBP1-204ENST00000460605 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
GTPBP1-204ENST00000460605 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
GTPBP1-204ENST00000460605 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
GTPBP1-204ENST00000460605 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
GTPBP1-204ENST00000460605 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
GTPBP1-204ENST00000460605 NESP48681 1621 aa21.51■■□□□ 1.03
GTPBP1-204ENST00000460605 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
GTPBP1-204ENST00000460605 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
GTPBP1-204ENST00000460605 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
GTPBP1-204ENST00000460605 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
GTPBP1-204ENST00000460605 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
GTPBP1-204ENST00000460605 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
GTPBP1-204ENST00000460605 TRIM41Q8WV44 630 aa21.31■■□□□ 1
GTPBP1-204ENST00000460605 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
GTPBP1-204ENST00000460605 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
GTPBP1-204ENST00000460605 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
GTPBP1-204ENST00000460605 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
GTPBP1-204ENST00000460605 WDR62O43379 1518 aa21.07■□□□□ 0.96
GTPBP1-204ENST00000460605 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
GTPBP1-204ENST00000460605 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
GTPBP1-204ENST00000460605 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
GTPBP1-204ENST00000460605 WIZO95785 1651 aa20.85■□□□□ 0.93
GTPBP1-204ENST00000460605 CFTRP13569 1480 aa20.81■□□□□ 0.92
GTPBP1-204ENST00000460605 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
GTPBP1-204ENST00000460605 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.9
GTPBP1-204ENST00000460605 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.9
GTPBP1-204ENST00000460605 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.9
GTPBP1-204ENST00000460605 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
GTPBP1-204ENST00000460605 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
GTPBP1-204ENST00000460605 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
GTPBP1-204ENST00000460605 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
GTPBP1-204ENST00000460605 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
GTPBP1-204ENST00000460605 ZNF608Q9ULD9 1512 aaPredicted RBP20.49■□□□□ 0.87
GTPBP1-204ENST00000460605 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
GTPBP1-204ENST00000460605 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
GTPBP1-204ENST00000460605 TRHP20396 242 aaPredicted RBP20.43■□□□□ 0.86
GTPBP1-204ENST00000460605 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
GTPBP1-204ENST00000460605 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
GTPBP1-204ENST00000460605 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
GTPBP1-204ENST00000460605 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
GTPBP1-204ENST00000460605 FBLN2P98095 1184 aa20.32■□□□□ 0.84
GTPBP1-204ENST00000460605 CHD1O14646 1710 aa20.3■□□□□ 0.84
GTPBP1-204ENST00000460605 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.845e-8■■■□□ 15.2
GTPBP1-204ENST00000460605 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
GTPBP1-204ENST00000460605 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
GTPBP1-204ENST00000460605 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
GTPBP1-204ENST00000460605 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
GTPBP1-204ENST00000460605 SOGA1O94964 1423 aa20.14■□□□□ 0.81
GTPBP1-204ENST00000460605 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
GTPBP1-204ENST00000460605 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
GTPBP1-204ENST00000460605 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
GTPBP1-204ENST00000460605 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
GTPBP1-204ENST00000460605 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
GTPBP1-204ENST00000460605 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
GTPBP1-204ENST00000460605 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
GTPBP1-204ENST00000460605 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
GTPBP1-204ENST00000460605 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
GTPBP1-204ENST00000460605 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
GTPBP1-204ENST00000460605 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
GTPBP1-204ENST00000460605 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
GTPBP1-204ENST00000460605 CUX1P39880 1505 aa19.88■□□□□ 0.77
GTPBP1-204ENST00000460605 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
GTPBP1-204ENST00000460605 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
GTPBP1-204ENST00000460605 ABCA5Q8WWZ7 1642 aa19.74■□□□□ 0.75
GTPBP1-204ENST00000460605 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
GTPBP1-204ENST00000460605 NUP160Q12769 1436 aa19.68■□□□□ 0.74
GTPBP1-204ENST00000460605 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
GTPBP1-204ENST00000460605 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
GTPBP1-204ENST00000460605 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
GTPBP1-204ENST00000460605 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
GTPBP1-204ENST00000460605 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
GTPBP1-204ENST00000460605 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
GTPBP1-204ENST00000460605 NPM1P06748 294 aaKnown RBP eCLIP19.58■□□□□ 0.72
GTPBP1-204ENST00000460605 KIF13AQ9H1H9 1805 aa19.56■□□□□ 0.72
GTPBP1-204ENST00000460605 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
GTPBP1-204ENST00000460605 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
GTPBP1-204ENST00000460605 JPH4Q96JJ6 628 aa19.53■□□□□ 0.72
GTPBP1-204ENST00000460605 FAM69CQ0P6D2 419 aa19.51■□□□□ 0.71
GTPBP1-204ENST00000460605 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms