RNA–Protein interactions for RNA: ENST00000460566.5

PITPNB-206, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 4

Gene PITPNB, Length 592 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-206ENST00000460566 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
PITPNB-206ENST00000460566 ABCC9O60706 1549 aa43.99■■■■■ 4.63
PITPNB-206ENST00000460566 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
PITPNB-206ENST00000460566 RB1CC1Q8TDY2 1594 aa41.86■■■■■ 4.29
PITPNB-206ENST00000460566 NACADO15069 1562 aa41.51■■■■■ 4.24
PITPNB-206ENST00000460566 DNAJC5BQ9UF47 199 aa41.47■■■■■ 4.23
PITPNB-206ENST00000460566 DCAF8L2P0C7V8 631 aa41.05■■■■■ 4.16
PITPNB-206ENST00000460566 MYO15BQ96JP2 1530 aa40.89■■■■■ 4.14
PITPNB-206ENST00000460566 PABPN1Q86U42 306 aaKnown RBP eCLIP40.86■■■■■ 4.13
PITPNB-206ENST00000460566 UNC13AQ9UPW8 1703 aa40.76■■■■■ 4.11
PITPNB-206ENST00000460566 BICRAQ9NZM4 1560 aa40.54■■■■■ 4.08
PITPNB-206ENST00000460566 DCAF1Q9Y4B6 1507 aa40.21■■■■■ 4.03
PITPNB-206ENST00000460566 ZCCHC6Q5VYS8 1495 aaKnown RBP40.21■■■■■ 4.03
PITPNB-206ENST00000460566 SHROOM4Q9ULL8 1493 aa40.2■■■■■ 4.03
PITPNB-206ENST00000460566 SCRIBQ14160 1630 aa39.77■■■■□ 3.96
PITPNB-206ENST00000460566 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.96
PITPNB-206ENST00000460566 CECR2Q9BXF3 1484 aa39.74■■■■□ 3.95
PITPNB-206ENST00000460566 EIF4G1Q04637 1599 aaKnown RBP39.63■■■■□ 3.93
PITPNB-206ENST00000460566 DNAJC5Q9H3Z4 198 aa38.47■■■■□ 3.75
PITPNB-206ENST00000460566 NCAPD3P42695 1498 aa38.3■■■■□ 3.72
PITPNB-206ENST00000460566 CUX2O14529 1486 aa38.2■■■■□ 3.71
PITPNB-206ENST00000460566 ERCC6Q03468 1493 aa38.1■■■■□ 3.69
PITPNB-206ENST00000460566 ATAD2BQ9ULI0 1458 aa38.09■■■■□ 3.69
PITPNB-206ENST00000460566 SMARCA2P51531 1590 aa38.04■■■■□ 3.68
PITPNB-206ENST00000460566 HMGXB3Q12766 1538 aa38.01■■■■□ 3.67
PITPNB-206ENST00000460566 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
PITPNB-206ENST00000460566 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
PITPNB-206ENST00000460566 BAZ1BQ9UIG0 1483 aaKnown RBP37.73■■■■□ 3.63
PITPNB-206ENST00000460566 NESP48681 1621 aa37.66■■■■□ 3.62
PITPNB-206ENST00000460566 PEG3Q9GZU2 1588 aa37.66■■■■□ 3.62
PITPNB-206ENST00000460566 LAMC3Q9Y6N6 1575 aa37.5■■■■□ 3.59
PITPNB-206ENST00000460566 THOC2Q8NI27 1593 aaKnown RBP37.43■■■■□ 3.58
PITPNB-206ENST00000460566 MROH2BQ7Z745 1585 aa37.37■■■■□ 3.57
PITPNB-206ENST00000460566 PDS5BQ9NTI5 1447 aa37.32■■■■□ 3.56
PITPNB-206ENST00000460566 KIF21AQ7Z4S6 1674 aa37.2■■■■□ 3.55
PITPNB-206ENST00000460566 CADPSQ9ULU8 1353 aa37.11■■■■□ 3.53
PITPNB-206ENST00000460566 MRC2Q9UBG0 1479 aa36.98■■■■□ 3.51
PITPNB-206ENST00000460566 WDR62O43379 1518 aa36.9■■■■□ 3.5
PITPNB-206ENST00000460566 WIZO95785 1651 aa36.88■■■■□ 3.49
PITPNB-206ENST00000460566 CEP164Q9UPV0 1460 aa36.76■■■■□ 3.48
PITPNB-206ENST00000460566 FANCD2Q9BXW9 1451 aa36.67■■■■□ 3.46
PITPNB-206ENST00000460566 CFTRP13569 1480 aa36.62■■■■□ 3.45
PITPNB-206ENST00000460566 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
PITPNB-206ENST00000460566 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.43
PITPNB-206ENST00000460566 TOP2AP11388 1531 aaKnown RBP36.49■■■■□ 3.43
PITPNB-206ENST00000460566 OSCARQ8IYS5 282 aa36.35■■■■□ 3.41
PITPNB-206ENST00000460566 URB2Q14146 1524 aaKnown RBP36.34■■■■□ 3.41
PITPNB-206ENST00000460566 PRDM2Q13029 1718 aa36.2■■■■□ 3.39
PITPNB-206ENST00000460566 IFT140Q96RY7 1462 aa36.06■■■■□ 3.36
PITPNB-206ENST00000460566 CCDC88BA6NC98 1476 aa36.03■■■■□ 3.36
PITPNB-206ENST00000460566 ABCC8Q09428 1581 aa35.94■■■■□ 3.34
PITPNB-206ENST00000460566 TOPBP1Q92547 1522 aa35.93■■■■□ 3.34
PITPNB-206ENST00000460566 ZNF608Q9ULD9 1512 aaPredicted RBP35.92■■■■□ 3.34
PITPNB-206ENST00000460566 RIMBP3CA6NJZ7 1639 aa35.85■■■■□ 3.33
PITPNB-206ENST00000460566 RIMBP3BA6NNM3 1639 aa35.85■■■■□ 3.33
PITPNB-206ENST00000460566 RIMBP3Q9UFD9 1639 aa35.85■■■■□ 3.33
PITPNB-206ENST00000460566 DNMBPQ6XZF7 1577 aa35.8■■■■□ 3.32
PITPNB-206ENST00000460566 EIF4G3O43432 1585 aaKnown RBP35.76■■■■□ 3.31
PITPNB-206ENST00000460566 ARHGEF11O15085 1522 aa35.74■■■■□ 3.31
PITPNB-206ENST00000460566 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
PITPNB-206ENST00000460566 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.286e-7■■■□□ 16.7
PITPNB-206ENST00000460566 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
PITPNB-206ENST00000460566 CHD1O14646 1710 aa35.51■■■■□ 3.27
PITPNB-206ENST00000460566 CYB5RLQ6IPT4 315 aa35.45■■■■□ 3.27
PITPNB-206ENST00000460566 FBLN2P98095 1184 aa35.4■■■■□ 3.26
PITPNB-206ENST00000460566 WDR97A6NE52 1622 aa35.38■■■■□ 3.25
PITPNB-206ENST00000460566 SOGA1O94964 1423 aa35.37■■■■□ 3.25
PITPNB-206ENST00000460566 RAD54L2Q9Y4B4 1467 aa35.35■■■■□ 3.25
PITPNB-206ENST00000460566 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
PITPNB-206ENST00000460566 TDRD9Q8NDG6 1382 aaKnown RBP35.3■■■■□ 3.24
PITPNB-206ENST00000460566 FGD5Q6ZNL6 1462 aa35.25■■■■□ 3.23
PITPNB-206ENST00000460566 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
PITPNB-206ENST00000460566 MAGI1Q96QZ7 1491 aaPredicted RBP35.21■■■■□ 3.23
PITPNB-206ENST00000460566 TRHP20396 242 aaPredicted RBP35.18■■■■□ 3.22
PITPNB-206ENST00000460566 SYNJ1O43426 1573 aa35.16■■■■□ 3.22
PITPNB-206ENST00000460566 CLASP1Q7Z460 1538 aa35.16■■■■□ 3.22
PITPNB-206ENST00000460566 CHMP7Q8WUX9 453 aaPredicted RBP35.15■■■■□ 3.22
PITPNB-206ENST00000460566 CUX1P39880 1505 aa35.15■■■■□ 3.22
PITPNB-206ENST00000460566 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
PITPNB-206ENST00000460566 SYNJ2O15056 1496 aa35.07■■■■□ 3.2
PITPNB-206ENST00000460566 GAPVD1Q14C86 1478 aa34.95■■■■□ 3.19
PITPNB-206ENST00000460566 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
PITPNB-206ENST00000460566 ABCA10Q8WWZ4 1543 aa34.88■■■■□ 3.17
PITPNB-206ENST00000460566 ABCA5Q8WWZ7 1642 aa34.83■■■■□ 3.17
PITPNB-206ENST00000460566 WRNQ14191 1432 aaPredicted RBP eCLIP34.7■■■■□ 3.15
PITPNB-206ENST00000460566 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
PITPNB-206ENST00000460566 ADAMTS12P58397 1594 aa34.6■■■■□ 3.13
PITPNB-206ENST00000460566 NUP160Q12769 1436 aa34.58■■■■□ 3.13
PITPNB-206ENST00000460566 SUPT5HO00267 1087 aaKnown RBP34.56■■■■□ 3.12
PITPNB-206ENST00000460566 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
PITPNB-206ENST00000460566 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
PITPNB-206ENST00000460566 FHAD1B1AJZ9 1412 aa34.52■■■■□ 3.12
PITPNB-206ENST00000460566 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
PITPNB-206ENST00000460566 ERCC6L2Q5T890 1561 aa34.47■■■■□ 3.11
PITPNB-206ENST00000460566 ERICH3Q5RHP9 1530 aa34.46■■■■□ 3.11
PITPNB-206ENST00000460566 SHROOM2Q13796 1616 aa34.45■■■■□ 3.11
PITPNB-206ENST00000460566 AEBP2Q6ZN18 517 aaPredicted RBP34.45■■■■□ 3.11
PITPNB-206ENST00000460566 PRG4Q92954 1404 aaPredicted RBP34.24■■■■□ 3.07
PITPNB-206ENST00000460566 JPH4Q96JJ6 628 aa34.18■■■■□ 3.06
PITPNB-206ENST00000460566 RUSC2Q8N2Y8 1516 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms