RNA–Protein interactions for RNA: ENST00000460496.1

PDPK1-205, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 4

Gene PDPK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-205ENST00000460496 NISCHQ9Y2I1 1504 aa36.42■■■■□ 3.42
PDPK1-205ENST00000460496 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
PDPK1-205ENST00000460496 ABCC9O60706 1549 aa32.65■■■□□ 2.82
PDPK1-205ENST00000460496 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
PDPK1-205ENST00000460496 NACADO15069 1562 aa30.85■■■□□ 2.53
PDPK1-205ENST00000460496 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.51
PDPK1-205ENST00000460496 DNAJC5BQ9UF47 199 aa30.6■■■□□ 2.49
PDPK1-205ENST00000460496 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.47
PDPK1-205ENST00000460496 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
PDPK1-205ENST00000460496 PABPN1Q86U42 306 aaKnown RBP eCLIP30.38■■■□□ 2.45
PDPK1-205ENST00000460496 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
PDPK1-205ENST00000460496 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
PDPK1-205ENST00000460496 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
PDPK1-205ENST00000460496 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
PDPK1-205ENST00000460496 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
PDPK1-205ENST00000460496 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
PDPK1-205ENST00000460496 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
PDPK1-205ENST00000460496 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
PDPK1-205ENST00000460496 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
PDPK1-205ENST00000460496 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
PDPK1-205ENST00000460496 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
PDPK1-205ENST00000460496 SMARCA2P51531 1590 aa28.33■■■□□ 2.12
PDPK1-205ENST00000460496 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
PDPK1-205ENST00000460496 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
PDPK1-205ENST00000460496 ERCC6Q03468 1493 aa28.14■■■□□ 2.09
PDPK1-205ENST00000460496 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
PDPK1-205ENST00000460496 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
PDPK1-205ENST00000460496 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
PDPK1-205ENST00000460496 NESP48681 1621 aa28.08■■■□□ 2.09
PDPK1-205ENST00000460496 CUX2O14529 1486 aa28.06■■■□□ 2.08
PDPK1-205ENST00000460496 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
PDPK1-205ENST00000460496 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
PDPK1-205ENST00000460496 WIZO95785 1651 aa27.81■■■□□ 2.04
PDPK1-205ENST00000460496 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
PDPK1-205ENST00000460496 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
PDPK1-205ENST00000460496 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
PDPK1-205ENST00000460496 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
PDPK1-205ENST00000460496 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
PDPK1-205ENST00000460496 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
PDPK1-205ENST00000460496 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
PDPK1-205ENST00000460496 WDR62O43379 1518 aa27.38■■□□□ 1.97
PDPK1-205ENST00000460496 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
PDPK1-205ENST00000460496 CFTRP13569 1480 aa27.31■■□□□ 1.96
PDPK1-205ENST00000460496 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
PDPK1-205ENST00000460496 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
PDPK1-205ENST00000460496 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
PDPK1-205ENST00000460496 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
PDPK1-205ENST00000460496 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
PDPK1-205ENST00000460496 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
PDPK1-205ENST00000460496 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
PDPK1-205ENST00000460496 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
PDPK1-205ENST00000460496 OSCARQ8IYS5 282 aa26.76■■□□□ 1.87
PDPK1-205ENST00000460496 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
PDPK1-205ENST00000460496 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
PDPK1-205ENST00000460496 EIF4G3O43432 1585 aaKnown RBP26.65■■□□□ 1.86
PDPK1-205ENST00000460496 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
PDPK1-205ENST00000460496 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
PDPK1-205ENST00000460496 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.843e-6■■■■□ 25.5
PDPK1-205ENST00000460496 RIMBP3CA6NJZ7 1639 aa26.52■■□□□ 1.84
PDPK1-205ENST00000460496 RIMBP3BA6NNM3 1639 aa26.52■■□□□ 1.84
PDPK1-205ENST00000460496 RIMBP3Q9UFD9 1639 aa26.52■■□□□ 1.84
PDPK1-205ENST00000460496 CHD1O14646 1710 aa26.49■■□□□ 1.83
PDPK1-205ENST00000460496 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
PDPK1-205ENST00000460496 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
PDPK1-205ENST00000460496 SOGA1O94964 1423 aa26.39■■□□□ 1.82
PDPK1-205ENST00000460496 CUX1P39880 1505 aa26.39■■□□□ 1.82
PDPK1-205ENST00000460496 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
PDPK1-205ENST00000460496 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
PDPK1-205ENST00000460496 SUPT5HO00267 1087 aaKnown RBP26.31■■□□□ 1.8
PDPK1-205ENST00000460496 FBLN2P98095 1184 aa26.3■■□□□ 1.8
PDPK1-205ENST00000460496 WDR97A6NE52 1622 aa26.27■■□□□ 1.8
PDPK1-205ENST00000460496 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
PDPK1-205ENST00000460496 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
PDPK1-205ENST00000460496 PBRM1Q86U86 1689 aa26.17■■□□□ 1.78
PDPK1-205ENST00000460496 GRIN2BQ13224 1484 aa26.16■■□□□ 1.78
PDPK1-205ENST00000460496 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
PDPK1-205ENST00000460496 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
PDPK1-205ENST00000460496 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
PDPK1-205ENST00000460496 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
PDPK1-205ENST00000460496 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
PDPK1-205ENST00000460496 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
PDPK1-205ENST00000460496 ABCA5Q8WWZ7 1642 aa26.08■■□□□ 1.77
PDPK1-205ENST00000460496 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
PDPK1-205ENST00000460496 ABCA10Q8WWZ4 1543 aa26.07■■□□□ 1.76
PDPK1-205ENST00000460496 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
PDPK1-205ENST00000460496 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
PDPK1-205ENST00000460496 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
PDPK1-205ENST00000460496 ADAMTS12P58397 1594 aa25.87■■□□□ 1.73
PDPK1-205ENST00000460496 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
PDPK1-205ENST00000460496 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
PDPK1-205ENST00000460496 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
PDPK1-205ENST00000460496 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
PDPK1-205ENST00000460496 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
PDPK1-205ENST00000460496 NUP160Q12769 1436 aa25.74■■□□□ 1.71
PDPK1-205ENST00000460496 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
PDPK1-205ENST00000460496 SHROOM2Q13796 1616 aa25.68■■□□□ 1.7
PDPK1-205ENST00000460496 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
PDPK1-205ENST00000460496 PRG4Q92954 1404 aaPredicted RBP25.49■■□□□ 1.67
PDPK1-205ENST00000460496 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
PDPK1-205ENST00000460496 IGF1RP08069 1367 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms