RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
SLC6A1-203ENST00000460480 ABCC9O60706 1549 aa33.12■■■□□ 2.89
SLC6A1-203ENST00000460480 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
SLC6A1-203ENST00000460480 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
SLC6A1-203ENST00000460480 NACADO15069 1562 aa31.32■■■□□ 2.6
SLC6A1-203ENST00000460480 DNAJC5BQ9UF47 199 aa31.26■■■□□ 2.59
SLC6A1-203ENST00000460480 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
SLC6A1-203ENST00000460480 MYO15BQ96JP2 1530 aa30.97■■■□□ 2.55
SLC6A1-203ENST00000460480 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
SLC6A1-203ENST00000460480 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
SLC6A1-203ENST00000460480 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
SLC6A1-203ENST00000460480 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
SLC6A1-203ENST00000460480 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
SLC6A1-203ENST00000460480 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.43
SLC6A1-203ENST00000460480 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
SLC6A1-203ENST00000460480 CC2D2AQ9P2K1 1620 aa29.91■■■□□ 2.38
SLC6A1-203ENST00000460480 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
SLC6A1-203ENST00000460480 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
SLC6A1-203ENST00000460480 NCAPD3P42695 1498 aa29■■■□□ 2.23
SLC6A1-203ENST00000460480 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
SLC6A1-203ENST00000460480 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
SLC6A1-203ENST00000460480 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
SLC6A1-203ENST00000460480 HMGXB3Q12766 1538 aa28.69■■■□□ 2.18
SLC6A1-203ENST00000460480 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
SLC6A1-203ENST00000460480 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
SLC6A1-203ENST00000460480 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
SLC6A1-203ENST00000460480 CUX2O14529 1486 aa28.54■■■□□ 2.16
SLC6A1-203ENST00000460480 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
SLC6A1-203ENST00000460480 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
SLC6A1-203ENST00000460480 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
SLC6A1-203ENST00000460480 NESP48681 1621 aa28.49■■■□□ 2.15
SLC6A1-203ENST00000460480 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
SLC6A1-203ENST00000460480 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
SLC6A1-203ENST00000460480 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
SLC6A1-203ENST00000460480 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
SLC6A1-203ENST00000460480 WIZO95785 1651 aa28.09■■■□□ 2.09
SLC6A1-203ENST00000460480 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
SLC6A1-203ENST00000460480 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
SLC6A1-203ENST00000460480 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
SLC6A1-203ENST00000460480 WDR62O43379 1518 aa27.77■■■□□ 2.04
SLC6A1-203ENST00000460480 CFTRP13569 1480 aa27.77■■■□□ 2.04
SLC6A1-203ENST00000460480 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
SLC6A1-203ENST00000460480 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
SLC6A1-203ENST00000460480 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
SLC6A1-203ENST00000460480 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
SLC6A1-203ENST00000460480 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
SLC6A1-203ENST00000460480 OSCARQ8IYS5 282 aa27.32■■□□□ 1.96
SLC6A1-203ENST00000460480 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
SLC6A1-203ENST00000460480 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
SLC6A1-203ENST00000460480 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
SLC6A1-203ENST00000460480 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
SLC6A1-203ENST00000460480 ZNF608Q9ULD9 1512 aaPredicted RBP27.19■■□□□ 1.94
SLC6A1-203ENST00000460480 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
SLC6A1-203ENST00000460480 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
SLC6A1-203ENST00000460480 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
SLC6A1-203ENST00000460480 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91
SLC6A1-203ENST00000460480 EIF4G3O43432 1585 aaKnown RBP26.93■■□□□ 1.9
SLC6A1-203ENST00000460480 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
SLC6A1-203ENST00000460480 RIMBP3CA6NJZ7 1639 aa26.87■■□□□ 1.89
SLC6A1-203ENST00000460480 RIMBP3BA6NNM3 1639 aa26.87■■□□□ 1.89
SLC6A1-203ENST00000460480 RIMBP3Q9UFD9 1639 aa26.87■■□□□ 1.89
SLC6A1-203ENST00000460480 RAD54L2Q9Y4B4 1467 aa26.85■■□□□ 1.89
SLC6A1-203ENST00000460480 SOGA1O94964 1423 aa26.83■■□□□ 1.89
SLC6A1-203ENST00000460480 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
SLC6A1-203ENST00000460480 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
SLC6A1-203ENST00000460480 CUX1P39880 1505 aa26.75■■□□□ 1.87
SLC6A1-203ENST00000460480 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
SLC6A1-203ENST00000460480 CHD1O14646 1710 aa26.72■■□□□ 1.87
SLC6A1-203ENST00000460480 FBLN2P98095 1184 aa26.71■■□□□ 1.87
SLC6A1-203ENST00000460480 CYB5RLQ6IPT4 315 aa26.66■■□□□ 1.86
SLC6A1-203ENST00000460480 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
SLC6A1-203ENST00000460480 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
SLC6A1-203ENST00000460480 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
SLC6A1-203ENST00000460480 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
SLC6A1-203ENST00000460480 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
SLC6A1-203ENST00000460480 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
SLC6A1-203ENST00000460480 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
SLC6A1-203ENST00000460480 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
SLC6A1-203ENST00000460480 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
SLC6A1-203ENST00000460480 ABCA10Q8WWZ4 1543 aa26.47■■□□□ 1.83
SLC6A1-203ENST00000460480 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
SLC6A1-203ENST00000460480 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
SLC6A1-203ENST00000460480 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
SLC6A1-203ENST00000460480 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
SLC6A1-203ENST00000460480 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
SLC6A1-203ENST00000460480 TRHP20396 242 aaPredicted RBP26.29■■□□□ 1.8
SLC6A1-203ENST00000460480 TOP2BQ02880 1626 aa26.28■■□□□ 1.8
SLC6A1-203ENST00000460480 BIVM-ERCC5R4GMW8 1640 aa26.27■■□□□ 1.8
SLC6A1-203ENST00000460480 GRIN2AQ12879 1464 aa26.22■■□□□ 1.79
SLC6A1-203ENST00000460480 NUP160Q12769 1436 aa26.17■■□□□ 1.78
SLC6A1-203ENST00000460480 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
SLC6A1-203ENST00000460480 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
SLC6A1-203ENST00000460480 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
SLC6A1-203ENST00000460480 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
SLC6A1-203ENST00000460480 ERCC6L2Q5T890 1561 aa26.1■■□□□ 1.77
SLC6A1-203ENST00000460480 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
SLC6A1-203ENST00000460480 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
SLC6A1-203ENST00000460480 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
SLC6A1-203ENST00000460480 IGF1RP08069 1367 aa25.89■■□□□ 1.74
SLC6A1-203ENST00000460480 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms