RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.87
CDK11A-209ENST00000460465 CCDC180Q9P1Z9 1646 aa34.24■■■■□ 3.07
CDK11A-209ENST00000460465 ZCCHC6Q5VYS8 1495 aaKnown RBP33■■■□□ 2.87
CDK11A-209ENST00000460465 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
CDK11A-209ENST00000460465 DCAF8L2P0C7V8 631 aa32.4■■■□□ 2.78
CDK11A-209ENST00000460465 ABCC9O60706 1549 aa32.32■■■□□ 2.76
CDK11A-209ENST00000460465 SHROOM4Q9ULL8 1493 aa32.11■■■□□ 2.73
CDK11A-209ENST00000460465 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
CDK11A-209ENST00000460465 NACADO15069 1562 aa31.83■■■□□ 2.69
CDK11A-209ENST00000460465 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
CDK11A-209ENST00000460465 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
CDK11A-209ENST00000460465 UNC13AQ9UPW8 1703 aa31.05■■■□□ 2.56
CDK11A-209ENST00000460465 SUPT5HO00267 1087 aaKnown RBP30.89■■■□□ 2.53
CDK11A-209ENST00000460465 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
CDK11A-209ENST00000460465 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
CDK11A-209ENST00000460465 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
CDK11A-209ENST00000460465 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
CDK11A-209ENST00000460465 MROH2BQ7Z745 1585 aa30.36■■■□□ 2.45
CDK11A-209ENST00000460465 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
CDK11A-209ENST00000460465 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
CDK11A-209ENST00000460465 WIZO95785 1651 aa30.16■■■□□ 2.42
CDK11A-209ENST00000460465 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
CDK11A-209ENST00000460465 PEG3Q9GZU2 1588 aa29.79■■■□□ 2.36
CDK11A-209ENST00000460465 EIF4G1Q04637 1599 aaKnown RBP29.7■■■□□ 2.34
CDK11A-209ENST00000460465 ATAD2BQ9ULI0 1458 aa29.65■■■□□ 2.34
CDK11A-209ENST00000460465 SMARCA2P51531 1590 aa29.64■■■□□ 2.33
CDK11A-209ENST00000460465 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
CDK11A-209ENST00000460465 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
CDK11A-209ENST00000460465 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
CDK11A-209ENST00000460465 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
CDK11A-209ENST00000460465 NCAPD3P42695 1498 aa29.35■■■□□ 2.29
CDK11A-209ENST00000460465 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
CDK11A-209ENST00000460465 TRIM41Q8WV44 630 aa29■■■□□ 2.23
CDK11A-209ENST00000460465 ABCC8Q09428 1581 aa28.94■■■□□ 2.22
CDK11A-209ENST00000460465 CFTRP13569 1480 aa28.74■■■□□ 2.19
CDK11A-209ENST00000460465 PRDM2Q13029 1718 aa28.71■■■□□ 2.19
CDK11A-209ENST00000460465 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
CDK11A-209ENST00000460465 SYNJ1O43426 1573 aa28.61■■■□□ 2.17
CDK11A-209ENST00000460465 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
CDK11A-209ENST00000460465 FAM9AQ8IZU1 332 aaPredicted RBP28.52■■■□□ 2.16
CDK11A-209ENST00000460465 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
CDK11A-209ENST00000460465 LOC105371045A0A1W2PR82 267 aa28.47■■■□□ 2.15
CDK11A-209ENST00000460465 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
CDK11A-209ENST00000460465 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
CDK11A-209ENST00000460465 NESP48681 1621 aa28.41■■■□□ 2.14
CDK11A-209ENST00000460465 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.14
CDK11A-209ENST00000460465 CUX1P39880 1505 aa28.39■■■□□ 2.13
CDK11A-209ENST00000460465 SOGA1O94964 1423 aa28.36■■■□□ 2.13
CDK11A-209ENST00000460465 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
CDK11A-209ENST00000460465 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
CDK11A-209ENST00000460465 EEA1Q15075 1411 aa28.27■■■□□ 2.12
CDK11A-209ENST00000460465 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
CDK11A-209ENST00000460465 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
CDK11A-209ENST00000460465 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
CDK11A-209ENST00000460465 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
CDK11A-209ENST00000460465 CSRNP3Q8WYN3 585 aa28.11■■■□□ 2.09
CDK11A-209ENST00000460465 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
CDK11A-209ENST00000460465 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
CDK11A-209ENST00000460465 TOPBP1Q92547 1522 aa28.04■■■□□ 2.08
CDK11A-209ENST00000460465 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
CDK11A-209ENST00000460465 KIF21BO75037 1637 aa27.96■■■□□ 2.07
CDK11A-209ENST00000460465 KIF27Q86VH2 1401 aa27.93■■■□□ 2.06
CDK11A-209ENST00000460465 GOLGA3Q08378 1498 aa27.92■■■□□ 2.06
CDK11A-209ENST00000460465 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
CDK11A-209ENST00000460465 CUX2O14529 1486 aa27.87■■■□□ 2.05
CDK11A-209ENST00000460465 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.04
CDK11A-209ENST00000460465 TNIKQ9UKE5 1360 aa27.82■■■□□ 2.04
CDK11A-209ENST00000460465 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
CDK11A-209ENST00000460465 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
CDK11A-209ENST00000460465 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
CDK11A-209ENST00000460465 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
CDK11A-209ENST00000460465 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
CDK11A-209ENST00000460465 PRXQ9BXM0 1461 aa27.76■■■□□ 2.04
CDK11A-209ENST00000460465 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
CDK11A-209ENST00000460465 CEP162Q5TB80 1403 aa27.7■■■□□ 2.03
CDK11A-209ENST00000460465 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
CDK11A-209ENST00000460465 IGF1RP08069 1367 aa27.67■■■□□ 2.02
CDK11A-209ENST00000460465 WDR62O43379 1518 aa27.66■■■□□ 2.02
CDK11A-209ENST00000460465 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.01
CDK11A-209ENST00000460465 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
CDK11A-209ENST00000460465 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
CDK11A-209ENST00000460465 CARMIL1Q5VZK9 1371 aa27.54■■■□□ 2
CDK11A-209ENST00000460465 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
CDK11A-209ENST00000460465 CUL7Q14999 1698 aa27.52■■■□□ 2
CDK11A-209ENST00000460465 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
CDK11A-209ENST00000460465 CLIP1P30622 1438 aa27.47■■□□□ 1.99
CDK11A-209ENST00000460465 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
CDK11A-209ENST00000460465 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
CDK11A-209ENST00000460465 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
CDK11A-209ENST00000460465 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.973e-7■■■□□ 15.1
CDK11A-209ENST00000460465 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
CDK11A-209ENST00000460465 EIF4G3O43432 1585 aaKnown RBP27.28■■□□□ 1.96
CDK11A-209ENST00000460465 CTTNBP2Q8WZ74 1663 aa27.27■■□□□ 1.96
CDK11A-209ENST00000460465 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
CDK11A-209ENST00000460465 ADAMTS12P58397 1594 aa27.24■■□□□ 1.95
CDK11A-209ENST00000460465 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
CDK11A-209ENST00000460465 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
CDK11A-209ENST00000460465 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
CDK11A-209ENST00000460465 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
CDK11A-209ENST00000460465 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms