RNA–Protein interactions for RNA: ENST00000460460.1

TTC21A-207, Transcript of tetratricopeptide repeat domain 21A, humanhuman

TSL 3

Gene TTC21A, Length 472 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC21A-207ENST00000460460 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
TTC21A-207ENST00000460460 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
TTC21A-207ENST00000460460 ABCC9O60706 1549 aa27.08■■□□□ 1.93
TTC21A-207ENST00000460460 ZCCHC6Q5VYS8 1495 aaKnown RBP26.84■■□□□ 1.89
TTC21A-207ENST00000460460 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
TTC21A-207ENST00000460460 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
TTC21A-207ENST00000460460 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
TTC21A-207ENST00000460460 NACADO15069 1562 aa26.51■■□□□ 1.83
TTC21A-207ENST00000460460 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.82
TTC21A-207ENST00000460460 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
TTC21A-207ENST00000460460 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
TTC21A-207ENST00000460460 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
TTC21A-207ENST00000460460 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
TTC21A-207ENST00000460460 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
TTC21A-207ENST00000460460 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
TTC21A-207ENST00000460460 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
TTC21A-207ENST00000460460 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
TTC21A-207ENST00000460460 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
TTC21A-207ENST00000460460 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
TTC21A-207ENST00000460460 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
TTC21A-207ENST00000460460 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
TTC21A-207ENST00000460460 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
TTC21A-207ENST00000460460 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
TTC21A-207ENST00000460460 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
TTC21A-207ENST00000460460 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
TTC21A-207ENST00000460460 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
TTC21A-207ENST00000460460 WIZO95785 1651 aa24.43■■□□□ 1.5
TTC21A-207ENST00000460460 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
TTC21A-207ENST00000460460 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
TTC21A-207ENST00000460460 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
TTC21A-207ENST00000460460 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
TTC21A-207ENST00000460460 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
TTC21A-207ENST00000460460 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
TTC21A-207ENST00000460460 CFTRP13569 1480 aa23.73■■□□□ 1.39
TTC21A-207ENST00000460460 LAMC3Q9Y6N6 1575 aa23.71■■□□□ 1.39
TTC21A-207ENST00000460460 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
TTC21A-207ENST00000460460 NESP48681 1621 aa23.56■■□□□ 1.36
TTC21A-207ENST00000460460 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
TTC21A-207ENST00000460460 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
TTC21A-207ENST00000460460 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
TTC21A-207ENST00000460460 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
TTC21A-207ENST00000460460 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
TTC21A-207ENST00000460460 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
TTC21A-207ENST00000460460 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
TTC21A-207ENST00000460460 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
TTC21A-207ENST00000460460 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
TTC21A-207ENST00000460460 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
TTC21A-207ENST00000460460 URB2Q14146 1524 aaKnown RBP23.14■■□□□ 1.3
TTC21A-207ENST00000460460 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
TTC21A-207ENST00000460460 WDR62O43379 1518 aa23.13■■□□□ 1.29
TTC21A-207ENST00000460460 CUX1P39880 1505 aa23.13■■□□□ 1.29
TTC21A-207ENST00000460460 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
TTC21A-207ENST00000460460 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
TTC21A-207ENST00000460460 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
TTC21A-207ENST00000460460 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
TTC21A-207ENST00000460460 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
TTC21A-207ENST00000460460 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
TTC21A-207ENST00000460460 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
TTC21A-207ENST00000460460 CUX2O14529 1486 aa22.96■■□□□ 1.27
TTC21A-207ENST00000460460 SOGA1O94964 1423 aa22.93■■□□□ 1.26
TTC21A-207ENST00000460460 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
TTC21A-207ENST00000460460 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
TTC21A-207ENST00000460460 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
TTC21A-207ENST00000460460 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
TTC21A-207ENST00000460460 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
TTC21A-207ENST00000460460 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
TTC21A-207ENST00000460460 EEA1Q15075 1411 aa22.75■■□□□ 1.23
TTC21A-207ENST00000460460 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
TTC21A-207ENST00000460460 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
TTC21A-207ENST00000460460 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
TTC21A-207ENST00000460460 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
TTC21A-207ENST00000460460 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
TTC21A-207ENST00000460460 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
TTC21A-207ENST00000460460 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
TTC21A-207ENST00000460460 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
TTC21A-207ENST00000460460 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
TTC21A-207ENST00000460460 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
TTC21A-207ENST00000460460 IGF1RP08069 1367 aa22.57■■□□□ 1.2
TTC21A-207ENST00000460460 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
TTC21A-207ENST00000460460 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
TTC21A-207ENST00000460460 MAGI1Q96QZ7 1491 aaPredicted RBP22.49■■□□□ 1.19
TTC21A-207ENST00000460460 CUL7Q14999 1698 aa22.48■■□□□ 1.19
TTC21A-207ENST00000460460 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
TTC21A-207ENST00000460460 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
TTC21A-207ENST00000460460 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
TTC21A-207ENST00000460460 PRXQ9BXM0 1461 aa22.42■■□□□ 1.18
TTC21A-207ENST00000460460 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
TTC21A-207ENST00000460460 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
TTC21A-207ENST00000460460 SYNJ2O15056 1496 aa22.38■■□□□ 1.17
TTC21A-207ENST00000460460 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
TTC21A-207ENST00000460460 KIF21BO75037 1637 aa22.37■■□□□ 1.17
TTC21A-207ENST00000460460 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
TTC21A-207ENST00000460460 FBLN2P98095 1184 aa22.28■■□□□ 1.16
TTC21A-207ENST00000460460 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
TTC21A-207ENST00000460460 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
TTC21A-207ENST00000460460 CHD1O14646 1710 aa22.18■■□□□ 1.14
TTC21A-207ENST00000460460 NUP160Q12769 1436 aa22.17■■□□□ 1.14
TTC21A-207ENST00000460460 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
TTC21A-207ENST00000460460 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
TTC21A-207ENST00000460460 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms