RNA–Protein interactions for RNA: ENST00000460433.5

PRKRA-206, Transcript of protein activator of interferon induced protein kinase EIF2AK2, humanhuman

TSL 3

Gene PRKRA, Length 461 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRA-206ENST00000460433 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
PRKRA-206ENST00000460433 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
PRKRA-206ENST00000460433 ABCC9O60706 1549 aa31.31■■■□□ 2.6
PRKRA-206ENST00000460433 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
PRKRA-206ENST00000460433 NACADO15069 1562 aa29.86■■■□□ 2.37
PRKRA-206ENST00000460433 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
PRKRA-206ENST00000460433 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
PRKRA-206ENST00000460433 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
PRKRA-206ENST00000460433 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
PRKRA-206ENST00000460433 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
PRKRA-206ENST00000460433 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
PRKRA-206ENST00000460433 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
PRKRA-206ENST00000460433 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.25
PRKRA-206ENST00000460433 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
PRKRA-206ENST00000460433 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
PRKRA-206ENST00000460433 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
PRKRA-206ENST00000460433 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
PRKRA-206ENST00000460433 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
PRKRA-206ENST00000460433 SMARCA4P51532 1647 aa27.57■■■□□ 2
PRKRA-206ENST00000460433 NCAPD3P42695 1498 aa27.55■■■□□ 2
PRKRA-206ENST00000460433 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
PRKRA-206ENST00000460433 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
PRKRA-206ENST00000460433 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
PRKRA-206ENST00000460433 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
PRKRA-206ENST00000460433 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
PRKRA-206ENST00000460433 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
PRKRA-206ENST00000460433 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
PRKRA-206ENST00000460433 NESP48681 1621 aa27.01■■□□□ 1.91
PRKRA-206ENST00000460433 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
PRKRA-206ENST00000460433 WIZO95785 1651 aa26.96■■□□□ 1.91
PRKRA-206ENST00000460433 CUX2O14529 1486 aa26.93■■□□□ 1.9
PRKRA-206ENST00000460433 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
PRKRA-206ENST00000460433 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
PRKRA-206ENST00000460433 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
PRKRA-206ENST00000460433 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
PRKRA-206ENST00000460433 CADPSQ9ULU8 1353 aa26.68■■□□□ 1.86
PRKRA-206ENST00000460433 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
PRKRA-206ENST00000460433 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
PRKRA-206ENST00000460433 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
PRKRA-206ENST00000460433 CFTRP13569 1480 aa26.47■■□□□ 1.83
PRKRA-206ENST00000460433 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
PRKRA-206ENST00000460433 WDR62O43379 1518 aa26.43■■□□□ 1.82
PRKRA-206ENST00000460433 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
PRKRA-206ENST00000460433 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
PRKRA-206ENST00000460433 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
PRKRA-206ENST00000460433 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
PRKRA-206ENST00000460433 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
PRKRA-206ENST00000460433 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
PRKRA-206ENST00000460433 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
PRKRA-206ENST00000460433 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
PRKRA-206ENST00000460433 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
PRKRA-206ENST00000460433 ZNF608Q9ULD9 1512 aaPredicted RBP25.79■■□□□ 1.72
PRKRA-206ENST00000460433 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
PRKRA-206ENST00000460433 EIF4G3O43432 1585 aaKnown RBP25.71■■□□□ 1.71
PRKRA-206ENST00000460433 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
PRKRA-206ENST00000460433 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
PRKRA-206ENST00000460433 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
PRKRA-206ENST00000460433 CUX1P39880 1505 aa25.59■■□□□ 1.69
PRKRA-206ENST00000460433 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.68
PRKRA-206ENST00000460433 FGD5Q6ZNL6 1462 aa25.56■■□□□ 1.68
PRKRA-206ENST00000460433 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
PRKRA-206ENST00000460433 SOGA1O94964 1423 aa25.53■■□□□ 1.68
PRKRA-206ENST00000460433 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
PRKRA-206ENST00000460433 CHD1O14646 1710 aa25.5■■□□□ 1.67
PRKRA-206ENST00000460433 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
PRKRA-206ENST00000460433 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
PRKRA-206ENST00000460433 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
PRKRA-206ENST00000460433 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
PRKRA-206ENST00000460433 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
PRKRA-206ENST00000460433 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
PRKRA-206ENST00000460433 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
PRKRA-206ENST00000460433 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
PRKRA-206ENST00000460433 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
PRKRA-206ENST00000460433 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
PRKRA-206ENST00000460433 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
PRKRA-206ENST00000460433 MAGI1Q96QZ7 1491 aaPredicted RBP25.3■■□□□ 1.64
PRKRA-206ENST00000460433 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
PRKRA-206ENST00000460433 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
PRKRA-206ENST00000460433 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
PRKRA-206ENST00000460433 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
PRKRA-206ENST00000460433 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
PRKRA-206ENST00000460433 FBLN2P98095 1184 aa25.23■■□□□ 1.63
PRKRA-206ENST00000460433 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
PRKRA-206ENST00000460433 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
PRKRA-206ENST00000460433 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
PRKRA-206ENST00000460433 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
PRKRA-206ENST00000460433 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
PRKRA-206ENST00000460433 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
PRKRA-206ENST00000460433 GRIN2AQ12879 1464 aa25■■□□□ 1.59
PRKRA-206ENST00000460433 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
PRKRA-206ENST00000460433 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
PRKRA-206ENST00000460433 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
PRKRA-206ENST00000460433 NUP160Q12769 1436 aa24.92■■□□□ 1.58
PRKRA-206ENST00000460433 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
PRKRA-206ENST00000460433 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
PRKRA-206ENST00000460433 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
PRKRA-206ENST00000460433 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
PRKRA-206ENST00000460433 CUL7Q14999 1698 aa24.7■■□□□ 1.54
PRKRA-206ENST00000460433 IGF1RP08069 1367 aa24.68■■□□□ 1.54
PRKRA-206ENST00000460433 TRHP20396 242 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms