RNA–Protein interactions for RNA: ENST00000460417.5

STK40-206, Transcript of serine/threonine kinase 40, humanhuman

TSL 2

Gene STK40, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-206ENST00000460417 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
STK40-206ENST00000460417 ABCC9O60706 1549 aa31.24■■■□□ 2.59
STK40-206ENST00000460417 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
STK40-206ENST00000460417 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
STK40-206ENST00000460417 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
STK40-206ENST00000460417 NACADO15069 1562 aa29.09■■■□□ 2.25
STK40-206ENST00000460417 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.23
STK40-206ENST00000460417 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
STK40-206ENST00000460417 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
STK40-206ENST00000460417 BICRAQ9NZM4 1560 aa28.69■■■□□ 2.18
STK40-206ENST00000460417 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
STK40-206ENST00000460417 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
STK40-206ENST00000460417 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
STK40-206ENST00000460417 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.09
STK40-206ENST00000460417 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
STK40-206ENST00000460417 ZCCHC6Q5VYS8 1495 aaKnown RBP27.92■■■□□ 2.06
STK40-206ENST00000460417 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
STK40-206ENST00000460417 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
STK40-206ENST00000460417 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
STK40-206ENST00000460417 CUX2O14529 1486 aa27.15■■□□□ 1.94
STK40-206ENST00000460417 ERCC6Q03468 1493 aa26.96■■□□□ 1.91
STK40-206ENST00000460417 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
STK40-206ENST00000460417 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
STK40-206ENST00000460417 NESP48681 1621 aa26.69■■□□□ 1.86
STK40-206ENST00000460417 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
STK40-206ENST00000460417 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
STK40-206ENST00000460417 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
STK40-206ENST00000460417 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
STK40-206ENST00000460417 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
STK40-206ENST00000460417 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
STK40-206ENST00000460417 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
STK40-206ENST00000460417 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
STK40-206ENST00000460417 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
STK40-206ENST00000460417 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
STK40-206ENST00000460417 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
STK40-206ENST00000460417 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
STK40-206ENST00000460417 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
STK40-206ENST00000460417 WDR62O43379 1518 aa26.02■■□□□ 1.76
STK40-206ENST00000460417 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
STK40-206ENST00000460417 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
STK40-206ENST00000460417 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
STK40-206ENST00000460417 WIZO95785 1651 aa25.76■■□□□ 1.71
STK40-206ENST00000460417 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
STK40-206ENST00000460417 CFTRP13569 1480 aa25.61■■□□□ 1.69
STK40-206ENST00000460417 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
STK40-206ENST00000460417 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
STK40-206ENST00000460417 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
STK40-206ENST00000460417 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
STK40-206ENST00000460417 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
STK40-206ENST00000460417 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
STK40-206ENST00000460417 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
STK40-206ENST00000460417 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
STK40-206ENST00000460417 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
STK40-206ENST00000460417 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
STK40-206ENST00000460417 CYB5RLQ6IPT4 315 aa25.24■■□□□ 1.63
STK40-206ENST00000460417 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
STK40-206ENST00000460417 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
STK40-206ENST00000460417 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
STK40-206ENST00000460417 CHD1O14646 1710 aa25.14■■□□□ 1.61
STK40-206ENST00000460417 TRHP20396 242 aaPredicted RBP25.12■■□□□ 1.61
STK40-206ENST00000460417 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
STK40-206ENST00000460417 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.63e-7■■■□□ 17
STK40-206ENST00000460417 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
STK40-206ENST00000460417 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
STK40-206ENST00000460417 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
STK40-206ENST00000460417 FBLN2P98095 1184 aa24.95■■□□□ 1.58
STK40-206ENST00000460417 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
STK40-206ENST00000460417 CLASP1Q7Z460 1538 aa24.83■■□□□ 1.57
STK40-206ENST00000460417 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
STK40-206ENST00000460417 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
STK40-206ENST00000460417 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
STK40-206ENST00000460417 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
STK40-206ENST00000460417 SOGA1O94964 1423 aa24.74■■□□□ 1.55
STK40-206ENST00000460417 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
STK40-206ENST00000460417 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
STK40-206ENST00000460417 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
STK40-206ENST00000460417 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
STK40-206ENST00000460417 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
STK40-206ENST00000460417 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
STK40-206ENST00000460417 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
STK40-206ENST00000460417 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
STK40-206ENST00000460417 CUX1P39880 1505 aa24.55■■□□□ 1.52
STK40-206ENST00000460417 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
STK40-206ENST00000460417 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
STK40-206ENST00000460417 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
STK40-206ENST00000460417 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
STK40-206ENST00000460417 CEP170Q5SW79 1584 aa24.3■■□□□ 1.48
STK40-206ENST00000460417 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
STK40-206ENST00000460417 KIF13AQ9H1H9 1805 aa24.28■■□□□ 1.48
STK40-206ENST00000460417 NUP160Q12769 1436 aa24.26■■□□□ 1.47
STK40-206ENST00000460417 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
STK40-206ENST00000460417 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
STK40-206ENST00000460417 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
STK40-206ENST00000460417 WRNQ14191 1432 aaPredicted RBP eCLIP24.07■■□□□ 1.44
STK40-206ENST00000460417 PRG4Q92954 1404 aaPredicted RBP24.05■■□□□ 1.44
STK40-206ENST00000460417 ABCC10Q5T3U5 1492 aa24.02■■□□□ 1.44
STK40-206ENST00000460417 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
STK40-206ENST00000460417 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
STK40-206ENST00000460417 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
STK40-206ENST00000460417 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms