RNA–Protein interactions for RNA: ENST00000460320.1

TRUB2-202, Transcript of TruB pseudouridine synthase family member 2, humanhuman

TSL 2

Gene TRUB2, Length 933 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2-202ENST00000460320 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
TRUB2-202ENST00000460320 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
TRUB2-202ENST00000460320 ABCC9O60706 1549 aa27.51■■■□□ 2
TRUB2-202ENST00000460320 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
TRUB2-202ENST00000460320 NACADO15069 1562 aa26.33■■□□□ 1.8
TRUB2-202ENST00000460320 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
TRUB2-202ENST00000460320 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
TRUB2-202ENST00000460320 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
TRUB2-202ENST00000460320 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
TRUB2-202ENST00000460320 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
TRUB2-202ENST00000460320 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
TRUB2-202ENST00000460320 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
TRUB2-202ENST00000460320 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
TRUB2-202ENST00000460320 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
TRUB2-202ENST00000460320 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
TRUB2-202ENST00000460320 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
TRUB2-202ENST00000460320 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
TRUB2-202ENST00000460320 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
TRUB2-202ENST00000460320 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
TRUB2-202ENST00000460320 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
TRUB2-202ENST00000460320 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
TRUB2-202ENST00000460320 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
TRUB2-202ENST00000460320 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
TRUB2-202ENST00000460320 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
TRUB2-202ENST00000460320 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
TRUB2-202ENST00000460320 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
TRUB2-202ENST00000460320 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
TRUB2-202ENST00000460320 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
TRUB2-202ENST00000460320 WIZO95785 1651 aa23.74■■□□□ 1.39
TRUB2-202ENST00000460320 NESP48681 1621 aa23.7■■□□□ 1.39
TRUB2-202ENST00000460320 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
TRUB2-202ENST00000460320 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
TRUB2-202ENST00000460320 CUX2O14529 1486 aa23.66■■□□□ 1.38
TRUB2-202ENST00000460320 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
TRUB2-202ENST00000460320 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
TRUB2-202ENST00000460320 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
TRUB2-202ENST00000460320 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
TRUB2-202ENST00000460320 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
TRUB2-202ENST00000460320 CFTRP13569 1480 aa23.35■■□□□ 1.33
TRUB2-202ENST00000460320 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
TRUB2-202ENST00000460320 CEP164Q9UPV0 1460 aa23.29■■□□□ 1.32
TRUB2-202ENST00000460320 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
TRUB2-202ENST00000460320 WDR62O43379 1518 aa23.23■■□□□ 1.31
TRUB2-202ENST00000460320 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
TRUB2-202ENST00000460320 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
TRUB2-202ENST00000460320 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
TRUB2-202ENST00000460320 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
TRUB2-202ENST00000460320 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
TRUB2-202ENST00000460320 TOPBP1Q92547 1522 aa22.86■■□□□ 1.25
TRUB2-202ENST00000460320 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
TRUB2-202ENST00000460320 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
TRUB2-202ENST00000460320 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
TRUB2-202ENST00000460320 ZNF608Q9ULD9 1512 aaPredicted RBP22.67■■□□□ 1.22
TRUB2-202ENST00000460320 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
TRUB2-202ENST00000460320 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
TRUB2-202ENST00000460320 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
TRUB2-202ENST00000460320 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
TRUB2-202ENST00000460320 CUX1P39880 1505 aa22.57■■□□□ 1.2
TRUB2-202ENST00000460320 SOGA1O94964 1423 aa22.55■■□□□ 1.2
TRUB2-202ENST00000460320 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
TRUB2-202ENST00000460320 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
TRUB2-202ENST00000460320 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.191e-6■■■■□ 19.8
TRUB2-202ENST00000460320 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
TRUB2-202ENST00000460320 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
TRUB2-202ENST00000460320 CHD1O14646 1710 aa22.35■■□□□ 1.17
TRUB2-202ENST00000460320 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
TRUB2-202ENST00000460320 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
TRUB2-202ENST00000460320 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
TRUB2-202ENST00000460320 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
TRUB2-202ENST00000460320 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
TRUB2-202ENST00000460320 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
TRUB2-202ENST00000460320 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
TRUB2-202ENST00000460320 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
TRUB2-202ENST00000460320 FBLN2P98095 1184 aa22.29■■□□□ 1.16
TRUB2-202ENST00000460320 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
TRUB2-202ENST00000460320 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
TRUB2-202ENST00000460320 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.16
TRUB2-202ENST00000460320 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
TRUB2-202ENST00000460320 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
TRUB2-202ENST00000460320 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
TRUB2-202ENST00000460320 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
TRUB2-202ENST00000460320 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
TRUB2-202ENST00000460320 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
TRUB2-202ENST00000460320 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
TRUB2-202ENST00000460320 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
TRUB2-202ENST00000460320 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
TRUB2-202ENST00000460320 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
TRUB2-202ENST00000460320 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
TRUB2-202ENST00000460320 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
TRUB2-202ENST00000460320 ARAP1Q96P48 1450 aa22.02■■□□□ 1.12
TRUB2-202ENST00000460320 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
TRUB2-202ENST00000460320 NUP160Q12769 1436 aa21.97■■□□□ 1.11
TRUB2-202ENST00000460320 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
TRUB2-202ENST00000460320 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
TRUB2-202ENST00000460320 CUL7Q14999 1698 aa21.84■■□□□ 1.09
TRUB2-202ENST00000460320 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
TRUB2-202ENST00000460320 IGF1RP08069 1367 aa21.82■■□□□ 1.08
TRUB2-202ENST00000460320 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
TRUB2-202ENST00000460320 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
TRUB2-202ENST00000460320 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms