RNA–Protein interactions for RNA: ENST00000460314.1

TRAF3IP3-206, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 2

Gene TRAF3IP3, Length 2,601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-206ENST00000460314 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.08
TRAF3IP3-206ENST00000460314 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
TRAF3IP3-206ENST00000460314 ABCC9O60706 1549 aa13.2□□□□□ -0.3
TRAF3IP3-206ENST00000460314 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP3-206ENST00000460314 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
TRAF3IP3-206ENST00000460314 DCAF1Q9Y4B6 1507 aa12.92□□□□□ -0.34
TRAF3IP3-206ENST00000460314 NACADO15069 1562 aa12.91□□□□□ -0.34
TRAF3IP3-206ENST00000460314 RB1CC1Q8TDY2 1594 aa12.87□□□□□ -0.35
TRAF3IP3-206ENST00000460314 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
TRAF3IP3-206ENST00000460314 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
TRAF3IP3-206ENST00000460314 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
TRAF3IP3-206ENST00000460314 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
TRAF3IP3-206ENST00000460314 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
TRAF3IP3-206ENST00000460314 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAF3IP3-206ENST00000460314 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP3-206ENST00000460314 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP3-206ENST00000460314 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
TRAF3IP3-206ENST00000460314 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
TRAF3IP3-206ENST00000460314 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
TRAF3IP3-206ENST00000460314 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
TRAF3IP3-206ENST00000460314 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
TRAF3IP3-206ENST00000460314 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
TRAF3IP3-206ENST00000460314 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
TRAF3IP3-206ENST00000460314 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
TRAF3IP3-206ENST00000460314 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
TRAF3IP3-206ENST00000460314 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
TRAF3IP3-206ENST00000460314 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
TRAF3IP3-206ENST00000460314 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
TRAF3IP3-206ENST00000460314 MYT1Q01538 1121 aa11.85□□□□□ -0.51
TRAF3IP3-206ENST00000460314 WIZO95785 1651 aa11.83□□□□□ -0.51
TRAF3IP3-206ENST00000460314 BAZ1BQ9UIG0 1483 aaKnown RBP11.79□□□□□ -0.52
TRAF3IP3-206ENST00000460314 TOP2AP11388 1531 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP3-206ENST00000460314 HRCP23327 699 aa11.59□□□□□ -0.55
TRAF3IP3-206ENST00000460314 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
TRAF3IP3-206ENST00000460314 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP3-206ENST00000460314 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
TRAF3IP3-206ENST00000460314 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
TRAF3IP3-206ENST00000460314 CADPSQ9ULU8 1353 aa11.51□□□□□ -0.57
TRAF3IP3-206ENST00000460314 CFTRP13569 1480 aa11.5□□□□□ -0.57
TRAF3IP3-206ENST00000460314 NESP48681 1621 aa11.48□□□□□ -0.57
TRAF3IP3-206ENST00000460314 PPARGC1BQ86YN6 1023 aaKnown RBP11.44□□□□□ -0.58
TRAF3IP3-206ENST00000460314 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
TRAF3IP3-206ENST00000460314 KIF21AQ7Z4S6 1674 aa11.43□□□□□ -0.58
TRAF3IP3-206ENST00000460314 SCAF1Q9H7N4 1312 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP3-206ENST00000460314 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
TRAF3IP3-206ENST00000460314 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
TRAF3IP3-206ENST00000460314 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
TRAF3IP3-206ENST00000460314 THOC2Q8NI27 1593 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP3-206ENST00000460314 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
TRAF3IP3-206ENST00000460314 TTBK1Q5TCY1 1321 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP3-206ENST00000460314 WDR62O43379 1518 aa11.3□□□□□ -0.6
TRAF3IP3-206ENST00000460314 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP3-206ENST00000460314 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
TRAF3IP3-206ENST00000460314 CUX2O14529 1486 aa11.27□□□□□ -0.6
TRAF3IP3-206ENST00000460314 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
TRAF3IP3-206ENST00000460314 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
TRAF3IP3-206ENST00000460314 TOPBP1Q92547 1522 aa11.23□□□□□ -0.61
TRAF3IP3-206ENST00000460314 BIVM-ERCC5R4GMW8 1640 aa11.21□□□□□ -0.62
TRAF3IP3-206ENST00000460314 CUX1P39880 1505 aa11.2□□□□□ -0.62
TRAF3IP3-206ENST00000460314 TOP2BQ02880 1626 aa11.19□□□□□ -0.62
TRAF3IP3-206ENST00000460314 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
TRAF3IP3-206ENST00000460314 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
TRAF3IP3-206ENST00000460314 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
TRAF3IP3-206ENST00000460314 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP3-206ENST00000460314 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
TRAF3IP3-206ENST00000460314 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
TRAF3IP3-206ENST00000460314 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
TRAF3IP3-206ENST00000460314 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
TRAF3IP3-206ENST00000460314 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
TRAF3IP3-206ENST00000460314 SOGA1O94964 1423 aa11.07□□□□□ -0.64
TRAF3IP3-206ENST00000460314 PCGF6Q9BYE7 350 aa11.06□□□□□ -0.64
TRAF3IP3-206ENST00000460314 ABCA10Q8WWZ4 1543 aa11.05□□□□□ -0.64
TRAF3IP3-206ENST00000460314 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
TRAF3IP3-206ENST00000460314 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
TRAF3IP3-206ENST00000460314 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
TRAF3IP3-206ENST00000460314 ZNF608Q9ULD9 1512 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP3-206ENST00000460314 PBRM1Q86U86 1689 aa11□□□□□ -0.65
TRAF3IP3-206ENST00000460314 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
TRAF3IP3-206ENST00000460314 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.66
TRAF3IP3-206ENST00000460314 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
TRAF3IP3-206ENST00000460314 GRIN2BQ13224 1484 aa10.95□□□□□ -0.66
TRAF3IP3-206ENST00000460314 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
TRAF3IP3-206ENST00000460314 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
TRAF3IP3-206ENST00000460314 CHIC1Q5VXU3 224 aa10.94□□□□□ -0.66
TRAF3IP3-206ENST00000460314 KIF27Q86VH2 1401 aa10.93□□□□□ -0.66
TRAF3IP3-206ENST00000460314 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
TRAF3IP3-206ENST00000460314 CUL7Q14999 1698 aa10.9□□□□□ -0.66
TRAF3IP3-206ENST00000460314 ADAMTS12P58397 1594 aa10.9□□□□□ -0.67
TRAF3IP3-206ENST00000460314 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
TRAF3IP3-206ENST00000460314 CHD1O14646 1710 aa10.89□□□□□ -0.67
TRAF3IP3-206ENST00000460314 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
TRAF3IP3-206ENST00000460314 APLP2Q06481 763 aa10.88□□□□□ -0.67
TRAF3IP3-206ENST00000460314 EEA1Q15075 1411 aa10.87□□□□□ -0.67
TRAF3IP3-206ENST00000460314 ACIN1Q9UKV3 1341 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP3-206ENST00000460314 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
TRAF3IP3-206ENST00000460314 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
TRAF3IP3-206ENST00000460314 IGF1RP08069 1367 aa10.85□□□□□ -0.67
TRAF3IP3-206ENST00000460314 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
TRAF3IP3-206ENST00000460314 NEUROD1Q13562 356 aa10.85□□□□□ -0.67
TRAF3IP3-206ENST00000460314 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms